RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 RGL3Q3MIN7 710 aa24.64■■□□□ 1.54
TSR3-202ENST00000566296 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.53
TSR3-202ENST00000566296 TECPR2O15040 1411 aa24.63■■□□□ 1.53
TSR3-202ENST00000566296 RBM6P78332 1123 aaKnown RBP24.63■■□□□ 1.53
TSR3-202ENST00000566296 NGLY1Q96IV0 654 aa24.63■■□□□ 1.53
TSR3-202ENST00000566296 RGS12O14924 1447 aa24.62■■□□□ 1.53
TSR3-202ENST00000566296 MPHOSPH9Q99550 1183 aa24.62■■□□□ 1.53
TSR3-202ENST00000566296 NPHP3Q7Z494 1330 aa24.61■■□□□ 1.53
TSR3-202ENST00000566296 COL22A1Q8NFW1 1626 aaPredicted RBP24.61■■□□□ 1.53
TSR3-202ENST00000566296 QTRT2Q9H974 415 aaKnown RBP24.61■■□□□ 1.53
TSR3-202ENST00000566296 LRPPRCP42704 1394 aaKnown RBP24.61■■□□□ 1.53
TSR3-202ENST00000566296 ESCO1Q5FWF5 840 aa24.6■■□□□ 1.53
TSR3-202ENST00000566296 STK26Q9P289 416 aa24.59■■□□□ 1.53
TSR3-202ENST00000566296 PIK3C2GO75747 1445 aa24.59■■□□□ 1.53
TSR3-202ENST00000566296 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
TSR3-202ENST00000566296 ABCC11Q96J66 1382 aa24.56■■□□□ 1.52
TSR3-202ENST00000566296 PXDNQ92626 1479 aa24.56■■□□□ 1.52
TSR3-202ENST00000566296 USP21Q9UK80 565 aa24.55■■□□□ 1.52
TSR3-202ENST00000566296 MYOM2P54296 1465 aa24.54■■□□□ 1.52
TSR3-202ENST00000566296 WAPLQ7Z5K2 1190 aa24.54■■□□□ 1.52
TSR3-202ENST00000566296 YTHDC2Q9H6S0 1430 aaKnown RBP24.53■■□□□ 1.52
TSR3-202ENST00000566296 FMN2Q9NZ56 1722 aa24.53■■□□□ 1.52
TSR3-202ENST00000566296 KIF1AQ12756 1690 aa24.53■■□□□ 1.52
TSR3-202ENST00000566296 TMEM132EQ6IEE7 984 aa24.52■■□□□ 1.52
TSR3-202ENST00000566296 TRPC5Q9UL62 973 aaPredicted RBP24.52■■□□□ 1.52
TSR3-202ENST00000566296 PLEKHH1Q9ULM0 1364 aa24.52■■□□□ 1.52
TSR3-202ENST00000566296 NUTM2FA1L443 756 aa24.51■■□□□ 1.51
TSR3-202ENST00000566296 FOXO3O43524 673 aa24.51■■□□□ 1.51
TSR3-202ENST00000566296 MARF1Q9Y4F3 1742 aaKnown RBP24.51■■□□□ 1.51
TSR3-202ENST00000566296 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
TSR3-202ENST00000566296 FNBP4Q8N3X1 1017 aaPredicted RBP24.5■■□□□ 1.51
TSR3-202ENST00000566296 ATRNO75882 1429 aa24.48■■□□□ 1.51
TSR3-202ENST00000566296 ATAD2Q6PL18 1390 aa24.47■■□□□ 1.51
TSR3-202ENST00000566296 NRXN1Q9ULB1 1477 aa24.45■■□□□ 1.51
TSR3-202ENST00000566296 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
TSR3-202ENST00000566296 C14orf93Q9H972 538 aaKnown RBP24.44■■□□□ 1.5
TSR3-202ENST00000566296 SIRT1Q96EB6 747 aa24.43■■□□□ 1.5
TSR3-202ENST00000566296 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.41■■□□□ 1.5
TSR3-202ENST00000566296 SPATA31A3Q5VYP0 1347 aa24.4■■□□□ 1.5
TSR3-202ENST00000566296 CFAP70Q5T0N1 1121 aa24.4■■□□□ 1.5
TSR3-202ENST00000566296 RGPD8O14715 1765 aaPredicted RBP24.39■■□□□ 1.5
TSR3-202ENST00000566296 BCL9LQ86UU0 1499 aa24.39■■□□□ 1.5
TSR3-202ENST00000566296 RAB3GAP2Q9H2M9 1393 aa24.39■■□□□ 1.49
TSR3-202ENST00000566296 USP32Q8NFA0 1604 aa24.38■■□□□ 1.49
TSR3-202ENST00000566296 TNS3Q68CZ2 1445 aa24.37■■□□□ 1.49
TSR3-202ENST00000566296 DLC1Q96QB1 1528 aa24.37■■□□□ 1.49
TSR3-202ENST00000566296 KRT28Q7Z3Y7 464 aa24.37■■□□□ 1.49
TSR3-202ENST00000566296 PHF8Q9UPP1 1060 aa24.37■■□□□ 1.49
TSR3-202ENST00000566296 PRAM1Q96QH2 718 aa24.36■■□□□ 1.49
TSR3-202ENST00000566296 PSME1Q06323 249 aa24.35■■□□□ 1.49
TSR3-202ENST00000566296 HAP1P54257 671 aaPredicted RBP24.34■■□□□ 1.49
TSR3-202ENST00000566296 SAFB2Q14151 953 aaKnown RBP eCLIP24.34■■□□□ 1.49
TSR3-202ENST00000566296 POGKQ9P215 609 aa24.34■■□□□ 1.49
TSR3-202ENST00000566296 SLIT2O94813 1529 aa24.34■■□□□ 1.49
TSR3-202ENST00000566296 ADGRB2O60241 1585 aa24.33■■□□□ 1.49
TSR3-202ENST00000566296 GJD4Q96KN9 370 aaPredicted RBP24.33■■□□□ 1.49
TSR3-202ENST00000566296 UNC5CLQ8IV45 518 aa24.32■■□□□ 1.48
TSR3-202ENST00000566296 ANKARQ7Z5J8 1434 aa24.32■■□□□ 1.48
TSR3-202ENST00000566296 SBNO1A3KN83 1393 aa24.3■■□□□ 1.48
TSR3-202ENST00000566296 ADGRB1O14514 1584 aa24.3■■□□□ 1.48
TSR3-202ENST00000566296 ABCA3Q99758 1704 aa24.3■■□□□ 1.48
TSR3-202ENST00000566296 ARHGEF10O15013 1369 aa24.29■■□□□ 1.48
TSR3-202ENST00000566296 RALGAPBQ86X10 1494 aa24.29■■□□□ 1.48
TSR3-202ENST00000566296 GLI3P10071 1580 aa24.29■■□□□ 1.48
TSR3-202ENST00000566296 EIF3AQ14152 1382 aaKnown RBP24.29■■□□□ 1.48
TSR3-202ENST00000566296 LMOD2Q6P5Q4 547 aa24.27■■□□□ 1.48
TSR3-202ENST00000566296 PLCH1Q4KWH8 1693 aa24.27■■□□□ 1.48
TSR3-202ENST00000566296 NWD2Q9ULI1 1742 aa24.27■■□□□ 1.48
TSR3-202ENST00000566296 PLEKHG5O94827 1062 aa24.25■■□□□ 1.47
TSR3-202ENST00000566296 CCDC125Q86Z20 511 aa24.24■■□□□ 1.47
TSR3-202ENST00000566296 TRAK1Q9UPV9 953 aa24.24■■□□□ 1.47
TSR3-202ENST00000566296 PMFBP1Q8TBY8 1022 aa24.23■■□□□ 1.47
TSR3-202ENST00000566296 CABLES1Q8TDN4 633 aa24.23■■□□□ 1.47
TSR3-202ENST00000566296 TULP4Q9NRJ4 1543 aa24.22■■□□□ 1.47
TSR3-202ENST00000566296 KDM2AQ9Y2K7 1162 aa24.22■■□□□ 1.47
TSR3-202ENST00000566296 DCAF11Q8TEB1 546 aa24.21■■□□□ 1.47
TSR3-202ENST00000566296 STAC3Q96MF2 364 aa24.21■■□□□ 1.47
TSR3-202ENST00000566296 HIRIP3Q9BW71 556 aaPredicted RBP24.21■■□□□ 1.47
TSR3-202ENST00000566296 TRPM3Q9HCF6 1732 aaPredicted RBP24.21■■□□□ 1.47
TSR3-202ENST00000566296 GPRASP1Q5JY77 1395 aa24.2■■□□□ 1.46
TSR3-202ENST00000566296 MINK1Q8N4C8 1332 aaPredicted RBP24.2■■□□□ 1.46
TSR3-202ENST00000566296 BRWD3Q6RI45 1802 aa24.2■■□□□ 1.46
TSR3-202ENST00000566296 VPS72Q15906 364 aa24.2■■□□□ 1.46
TSR3-202ENST00000566296 CCDC9Q9Y3X0 531 aaKnown RBP24.2■■□□□ 1.46
TSR3-202ENST00000566296 EP400Q96L91 3159 aa24.2■■□□□ 1.46
TSR3-202ENST00000566296 ZRANB1Q9UGI0 708 aa24.19■■□□□ 1.46
TSR3-202ENST00000566296 BLMP54132 1417 aaPredicted RBP24.18■■□□□ 1.46
TSR3-202ENST00000566296 ALS2Q96Q42 1657 aa24.17■■□□□ 1.46
TSR3-202ENST00000566296 ARHGEF28Q8N1W1 1705 aaKnown RBP24.16■■□□□ 1.46
TSR3-202ENST00000566296 ITSN1Q15811 1721 aa24.15■■□□□ 1.46
TSR3-202ENST00000566296 PRR36Q9H6K5 1346 aa24.15■■□□□ 1.46
TSR3-202ENST00000566296 WASLO00401 505 aaPredicted RBP24.15■■□□□ 1.46
TSR3-202ENST00000566296 SEPT12Q8IYM1 358 aa24.15■■□□□ 1.46
TSR3-202ENST00000566296 NRAPQ86VF7 1730 aa24.15■■□□□ 1.46
TSR3-202ENST00000566296 HRCP23327 699 aa24.14■■□□□ 1.45
TSR3-202ENST00000566296 COL14A1Q05707 1796 aaKnown RBP24.13■■□□□ 1.45
TSR3-202ENST00000566296 SF3B2Q13435 895 aaKnown RBP24.12■■□□□ 1.45
TSR3-202ENST00000566296 NGDNQ8NEJ9 315 aaKnown RBP24.12■■□□□ 1.45
TSR3-202ENST00000566296 A0A0G2JS52 829 aa24.11■■□□□ 1.45
TSR3-202ENST00000566296 MYT1Q01538 1121 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms