RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 DHX57Q6P158 1386 aaKnown RBP30.07■■■□□ 2.4
EDC3-209ENST00000566119 SPATA31A6Q5VVP1 1343 aa30.06■■■□□ 2.4
EDC3-209ENST00000566119 LRRC59Q96AG4 307 aaKnown RBP30.05■■■□□ 2.4
EDC3-209ENST00000566119 STAC3Q96MF2 364 aa30.05■■■□□ 2.4
EDC3-209ENST00000566119 ESCO1Q5FWF5 840 aa30■■■□□ 2.39
EDC3-209ENST00000566119 NUTM2FA1L443 756 aa29.99■■■□□ 2.39
EDC3-209ENST00000566119 NHSL1Q5SYE7 1610 aa29.98■■■□□ 2.39
EDC3-209ENST00000566119 PRAM1Q96QH2 718 aa29.98■■■□□ 2.39
EDC3-209ENST00000566119 CDC42BPGQ6DT37 1551 aa29.98■■■□□ 2.39
EDC3-209ENST00000566119 LAMC1P11047 1609 aa29.97■■■□□ 2.39
EDC3-209ENST00000566119 NUTM2BA6NNL0 878 aaPredicted RBP29.97■■■□□ 2.39
EDC3-209ENST00000566119 NUTM2EB1AL46 878 aaPredicted RBP29.97■■■□□ 2.39
EDC3-209ENST00000566119 POTEAQ6S8J7 498 aa29.97■■■□□ 2.39
EDC3-209ENST00000566119 NUTM2AQ8IVF1 878 aaPredicted RBP29.97■■■□□ 2.39
EDC3-209ENST00000566119 LRP6O75581 1613 aa29.96■■■□□ 2.39
EDC3-209ENST00000566119 KNDC1Q76NI1 1749 aa29.96■■■□□ 2.39
EDC3-209ENST00000566119 MEX3CQ5U5Q3 659 aaKnown RBP29.96■■■□□ 2.39
EDC3-209ENST00000566119 SOS2Q07890 1332 aaPredicted RBP29.96■■■□□ 2.39
EDC3-209ENST00000566119 SAFB2Q14151 953 aaKnown RBP eCLIP29.95■■■□□ 2.39
EDC3-209ENST00000566119 TRAK1Q9UPV9 953 aa29.94■■■□□ 2.38
EDC3-209ENST00000566119 SHPRHQ149N8 1683 aa29.94■■■□□ 2.38
EDC3-209ENST00000566119 POGKQ9P215 609 aa29.93■■■□□ 2.38
EDC3-209ENST00000566119 ADGRB1O14514 1584 aa29.92■■■□□ 2.38
EDC3-209ENST00000566119 PNPLA6Q8IY17 1366 aa29.9■■■□□ 2.38
EDC3-209ENST00000566119 FOXO3O43524 673 aa29.9■■■□□ 2.38
EDC3-209ENST00000566119 NPHP3Q7Z494 1330 aa29.89■■■□□ 2.38
EDC3-209ENST00000566119 DLC1Q96QB1 1528 aa29.87■■■□□ 2.37
EDC3-209ENST00000566119 XPCQ01831 940 aaPredicted RBP29.85■■■□□ 2.37
EDC3-209ENST00000566119 ZNF772Q68DY9 489 aaPredicted RBP29.82■■■□□ 2.36
EDC3-209ENST00000566119 SIN3AQ96ST3 1273 aa29.81■■■□□ 2.36
EDC3-209ENST00000566119 HIRIP3Q9BW71 556 aaPredicted RBP29.81■■■□□ 2.36
EDC3-209ENST00000566119 FMN2Q9NZ56 1722 aa29.8■■■□□ 2.36
EDC3-209ENST00000566119 MINK1Q8N4C8 1332 aaPredicted RBP29.79■■■□□ 2.36
EDC3-209ENST00000566119 PXDNQ92626 1479 aa29.79■■■□□ 2.36
EDC3-209ENST00000566119 PHF8Q9UPP1 1060 aa29.78■■■□□ 2.36
EDC3-209ENST00000566119 ADAMTS2O95450 1211 aa29.77■■■□□ 2.36
EDC3-209ENST00000566119 C8orf37Q96NL8 207 aa29.77■■■□□ 2.36
EDC3-209ENST00000566119 L3MBTL2Q969R5 705 aa29.76■■■□□ 2.35
EDC3-209ENST00000566119 AFF2P51816 1311 aa29.75■■■□□ 2.35
EDC3-209ENST00000566119 NEUROD1Q13562 356 aa29.75■■■□□ 2.35
EDC3-209ENST00000566119 NBPF1Q3BBV0 1214 aa29.75■■■□□ 2.35
EDC3-209ENST00000566119 KRT28Q7Z3Y7 464 aa29.75■■■□□ 2.35
EDC3-209ENST00000566119 TRIM26Q12899 539 aaPredicted RBP29.73■■■□□ 2.35
EDC3-209ENST00000566119 WASLO00401 505 aaPredicted RBP29.72■■■□□ 2.35
EDC3-209ENST00000566119 NGLY1Q96IV0 654 aa29.71■■■□□ 2.35
EDC3-209ENST00000566119 PMFBP1Q8TBY8 1022 aa29.7■■■□□ 2.35
EDC3-209ENST00000566119 ANKARQ7Z5J8 1434 aa29.7■■■□□ 2.34
EDC3-209ENST00000566119 SPATA31A3Q5VYP0 1347 aa29.7■■■□□ 2.34
EDC3-209ENST00000566119 ADGRB2O60241 1585 aa29.69■■■□□ 2.34
EDC3-209ENST00000566119 PSME1Q06323 249 aa29.68■■■□□ 2.34
EDC3-209ENST00000566119 PRR36Q9H6K5 1346 aa29.68■■■□□ 2.34
EDC3-209ENST00000566119 KIF1AQ12756 1690 aa29.66■■■□□ 2.34
EDC3-209ENST00000566119 RXRBP28702 533 aa29.66■■■□□ 2.34
EDC3-209ENST00000566119 QTRT2Q9H974 415 aaKnown RBP29.65■■■□□ 2.34
EDC3-209ENST00000566119 EIF3AQ14152 1382 aaKnown RBP29.64■■■□□ 2.34
EDC3-209ENST00000566119 COL22A1Q8NFW1 1626 aaPredicted RBP29.64■■■□□ 2.34
EDC3-209ENST00000566119 RGPD8O14715 1765 aaPredicted RBP29.64■■■□□ 2.34
EDC3-209ENST00000566119 USP32Q8NFA0 1604 aa29.63■■■□□ 2.33
EDC3-209ENST00000566119 KIAA1210Q9ULL0 1709 aa29.62■■■□□ 2.33
EDC3-209ENST00000566119 ARHGEF28Q8N1W1 1705 aaKnown RBP29.6■■■□□ 2.33
EDC3-209ENST00000566119 FNBP4Q8N3X1 1017 aaPredicted RBP29.6■■■□□ 2.33
EDC3-209ENST00000566119 CDK19Q9BWU1 502 aa29.6■■■□□ 2.33
EDC3-209ENST00000566119 TULP4Q9NRJ4 1543 aa29.6■■■□□ 2.33
EDC3-209ENST00000566119 NUDT16Q96DE0 195 aaKnown RBP29.59■■■□□ 2.33
EDC3-209ENST00000566119 USP21Q9UK80 565 aa29.59■■■□□ 2.33
EDC3-209ENST00000566119 SBNO1A3KN83 1393 aa29.59■■■□□ 2.33
EDC3-209ENST00000566119 LMOD2Q6P5Q4 547 aa29.58■■■□□ 2.33
EDC3-209ENST00000566119 TNS3Q68CZ2 1445 aa29.57■■■□□ 2.32
EDC3-209ENST00000566119 RBM6P78332 1123 aaKnown RBP29.55■■■□□ 2.32
EDC3-209ENST00000566119 NGDNQ8NEJ9 315 aaKnown RBP29.55■■■□□ 2.32
EDC3-209ENST00000566119 CABLES1Q8TDN4 633 aa29.55■■■□□ 2.32
EDC3-209ENST00000566119 GPRASP1Q5JY77 1395 aa29.54■■■□□ 2.32
EDC3-209ENST00000566119 PLEKHG5O94827 1062 aa29.54■■■□□ 2.32
EDC3-209ENST00000566119 CENPJQ9HC77 1338 aaPredicted RBP29.53■■■□□ 2.32
EDC3-209ENST00000566119 ARHGEF10O15013 1369 aa29.52■■■□□ 2.32
EDC3-209ENST00000566119 HAP1P54257 671 aaPredicted RBP29.51■■■□□ 2.31
EDC3-209ENST00000566119 TRPC5Q9UL62 973 aaPredicted RBP29.51■■■□□ 2.31
EDC3-209ENST00000566119 ATP7BP35670 1465 aa29.5■■■□□ 2.31
EDC3-209ENST00000566119 NBPF8Q3BBV2 869 aa29.5■■■□□ 2.31
EDC3-209ENST00000566119 CCDC61Q9Y6R9 512 aa29.49■■■□□ 2.31
EDC3-209ENST00000566119 CDK12Q9NYV4 1490 aaPredicted RBP29.48■■■□□ 2.31
EDC3-209ENST00000566119 BCL9LQ86UU0 1499 aa29.47■■■□□ 2.31
EDC3-209ENST00000566119 PAK3O75914 559 aaPredicted RBP29.46■■■□□ 2.31
EDC3-209ENST00000566119 ROCK2O75116 1388 aaKnown RBP29.46■■■□□ 2.31
EDC3-209ENST00000566119 SRPK2P78362 688 aaKnown RBP29.45■■■□□ 2.31
EDC3-209ENST00000566119 PLEKHG3A1L390 1219 aa29.44■■■□□ 2.3
EDC3-209ENST00000566119 CABP2Q9NPB3 220 aa29.44■■■□□ 2.3
EDC3-209ENST00000566119 ATRNO75882 1429 aa29.44■■■□□ 2.3
EDC3-209ENST00000566119 ACEP12821 1306 aa29.43■■■□□ 2.3
EDC3-209ENST00000566119 TRPM1Q7Z4N2 1603 aa29.42■■■□□ 2.3
EDC3-209ENST00000566119 TONSLQ96HA7 1378 aa29.41■■■□□ 2.3
EDC3-209ENST00000566119 RGS12O14924 1447 aa29.41■■■□□ 2.3
EDC3-209ENST00000566119 UNC5CLQ8IV45 518 aa29.41■■■□□ 2.3
EDC3-209ENST00000566119 TRPM3Q9HCF6 1732 aaPredicted RBP29.4■■■□□ 2.3
EDC3-209ENST00000566119 POLR3AO14802 1390 aaPredicted RBP29.39■■■□□ 2.3
EDC3-209ENST00000566119 SLIT2O94813 1529 aa29.39■■■□□ 2.3
EDC3-209ENST00000566119 MARF1Q9Y4F3 1742 aaKnown RBP29.38■■■□□ 2.29
EDC3-209ENST00000566119 FAM83GA6ND36 823 aa29.38■■■□□ 2.29
EDC3-209ENST00000566119 UPF1Q92900 1129 aaKnown RBP eCLIP29.38■■■□□ 2.29
EDC3-209ENST00000566119 GJD4Q96KN9 370 aaPredicted RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms