RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
SHCBP1-204ENST00000565887 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.91■□□□□ 0.46
SHCBP1-204ENST00000565887 ROCK2O75116 1388 aaKnown RBP17.91■□□□□ 0.46
SHCBP1-204ENST00000565887 CARD11Q9BXL7 1154 aa17.87■□□□□ 0.45
SHCBP1-204ENST00000565887 GPRASP1Q5JY77 1395 aa17.87■□□□□ 0.45
SHCBP1-204ENST00000565887 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
SHCBP1-204ENST00000565887 EIF3AQ14152 1382 aaKnown RBP17.86■□□□□ 0.45
SHCBP1-204ENST00000565887 PLEKHH1Q9ULM0 1364 aa17.86■□□□□ 0.45
SHCBP1-204ENST00000565887 TRPM1Q7Z4N2 1603 aa17.86■□□□□ 0.45
SHCBP1-204ENST00000565887 SAFB2Q14151 953 aaKnown RBP eCLIP17.85■□□□□ 0.45
SHCBP1-204ENST00000565887 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
SHCBP1-204ENST00000565887 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
SHCBP1-204ENST00000565887 MST1RQ04912 1400 aa17.83■□□□□ 0.45
SHCBP1-204ENST00000565887 NALCNQ8IZF0 1738 aa17.83■□□□□ 0.44
SHCBP1-204ENST00000565887 CDC42BPGQ6DT37 1551 aa17.83■□□□□ 0.44
SHCBP1-204ENST00000565887 WASLO00401 505 aaPredicted RBP17.82■□□□□ 0.44
SHCBP1-204ENST00000565887 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
SHCBP1-204ENST00000565887 BRINP3Q76B58 766 aa17.81■□□□□ 0.44
SHCBP1-204ENST00000565887 C1orf167Q5SNV9 1468 aa17.81■□□□□ 0.44
SHCBP1-204ENST00000565887 HSPA1LP34931 641 aa17.8■□□□□ 0.44
SHCBP1-204ENST00000565887 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
SHCBP1-204ENST00000565887 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
SHCBP1-204ENST00000565887 HIRIP3Q9BW71 556 aaPredicted RBP17.78■□□□□ 0.44
SHCBP1-204ENST00000565887 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.44
SHCBP1-204ENST00000565887 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
SHCBP1-204ENST00000565887 ADGRB2O60241 1585 aa17.77■□□□□ 0.44
SHCBP1-204ENST00000565887 EVC2Q86UK5 1308 aa17.76■□□□□ 0.43
SHCBP1-204ENST00000565887 ORAI2Q96SN7 254 aa17.76■□□□□ 0.43
SHCBP1-204ENST00000565887 CDK19Q9BWU1 502 aa17.76■□□□□ 0.43
SHCBP1-204ENST00000565887 NPHP3Q7Z494 1330 aa17.74■□□□□ 0.43
SHCBP1-204ENST00000565887 NUTM2FA1L443 756 aa17.74■□□□□ 0.43
SHCBP1-204ENST00000565887 LRRC59Q96AG4 307 aaKnown RBP17.74■□□□□ 0.43
SHCBP1-204ENST00000565887 SBNO2Q9Y2G9 1366 aa17.74■□□□□ 0.43
SHCBP1-204ENST00000565887 FMN2Q9NZ56 1722 aa17.73■□□□□ 0.43
SHCBP1-204ENST00000565887 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
SHCBP1-204ENST00000565887 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
SHCBP1-204ENST00000565887 NUDT16Q96DE0 195 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-204ENST00000565887 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-204ENST00000565887 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
SHCBP1-204ENST00000565887 PSME1Q06323 249 aa17.71■□□□□ 0.43
SHCBP1-204ENST00000565887 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
SHCBP1-204ENST00000565887 FOXO3O43524 673 aa17.7■□□□□ 0.42
SHCBP1-204ENST00000565887 TULP4Q9NRJ4 1543 aa17.7■□□□□ 0.42
SHCBP1-204ENST00000565887 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
SHCBP1-204ENST00000565887 SOS2Q07890 1332 aaPredicted RBP17.69■□□□□ 0.42
SHCBP1-204ENST00000565887 QRICH2Q9H0J4 1663 aa17.68■□□□□ 0.42
SHCBP1-204ENST00000565887 PLEKHG3A1L390 1219 aa17.68■□□□□ 0.42
SHCBP1-204ENST00000565887 PHLPP1O60346 1717 aa17.68■□□□□ 0.42
SHCBP1-204ENST00000565887 USP47Q96K76 1375 aa17.67■□□□□ 0.42
SHCBP1-204ENST00000565887 JCADQ9P266 1359 aa17.67■□□□□ 0.42
SHCBP1-204ENST00000565887 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
SHCBP1-204ENST00000565887 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
SHCBP1-204ENST00000565887 CDCA8Q53HL2 280 aa17.66■□□□□ 0.42
SHCBP1-204ENST00000565887 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
SHCBP1-204ENST00000565887 KIF1AQ12756 1690 aa17.66■□□□□ 0.42
SHCBP1-204ENST00000565887 PRR36Q9H6K5 1346 aa17.66■□□□□ 0.42
SHCBP1-204ENST00000565887 CABP2Q9NPB3 220 aa17.65■□□□□ 0.42
SHCBP1-204ENST00000565887 NHSL1Q5SYE7 1610 aa17.65■□□□□ 0.42
SHCBP1-204ENST00000565887 ATAD2Q6PL18 1390 aa17.65■□□□□ 0.42
SHCBP1-204ENST00000565887 TMF1P82094 1093 aa17.64■□□□□ 0.41
SHCBP1-204ENST00000565887 PMFBP1Q8TBY8 1022 aa17.64■□□□□ 0.41
SHCBP1-204ENST00000565887 TESK2Q96S53 571 aa17.64■□□□□ 0.41
SHCBP1-204ENST00000565887 SPATA31A6Q5VVP1 1343 aa17.64■□□□□ 0.41
SHCBP1-204ENST00000565887 DDX17Q92841 729 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-204ENST00000565887 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-204ENST00000565887 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-204ENST00000565887 ATP7BP35670 1465 aa17.62■□□□□ 0.41
SHCBP1-204ENST00000565887 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
SHCBP1-204ENST00000565887 USP32Q8NFA0 1604 aa17.61■□□□□ 0.41
SHCBP1-204ENST00000565887 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
SHCBP1-204ENST00000565887 SBNO1A3KN83 1393 aa17.61■□□□□ 0.41
SHCBP1-204ENST00000565887 CABP1Q9NZU7 370 aa17.6■□□□□ 0.41
SHCBP1-204ENST00000565887 ACEP12821 1306 aa17.6■□□□□ 0.41
SHCBP1-204ENST00000565887 POLR3AO14802 1390 aaPredicted RBP17.6■□□□□ 0.41
SHCBP1-204ENST00000565887 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
SHCBP1-204ENST00000565887 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
SHCBP1-204ENST00000565887 PXDNQ92626 1479 aa17.58■□□□□ 0.41
SHCBP1-204ENST00000565887 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.4
SHCBP1-204ENST00000565887 ARHGEF10O15013 1369 aa17.57■□□□□ 0.4
SHCBP1-204ENST00000565887 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
SHCBP1-204ENST00000565887 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
SHCBP1-204ENST00000565887 XPCQ01831 940 aaPredicted RBP17.57■□□□□ 0.4
SHCBP1-204ENST00000565887 PNPLA6Q8IY17 1366 aa17.55■□□□□ 0.4
SHCBP1-204ENST00000565887 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
SHCBP1-204ENST00000565887 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
SHCBP1-204ENST00000565887 SHPRHQ149N8 1683 aa17.55■□□□□ 0.4
SHCBP1-204ENST00000565887 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
SHCBP1-204ENST00000565887 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
SHCBP1-204ENST00000565887 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
SHCBP1-204ENST00000565887 TOPAZ1Q8N9V7 1692 aa17.53■□□□□ 0.4
SHCBP1-204ENST00000565887 LMOD2Q6P5Q4 547 aa17.53■□□□□ 0.4
SHCBP1-204ENST00000565887 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
SHCBP1-204ENST00000565887 MEX3CQ5U5Q3 659 aaKnown RBP17.51■□□□□ 0.39
SHCBP1-204ENST00000565887 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
SHCBP1-204ENST00000565887 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
SHCBP1-204ENST00000565887 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
SHCBP1-204ENST00000565887 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
SHCBP1-204ENST00000565887 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
SHCBP1-204ENST00000565887 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
SHCBP1-204ENST00000565887 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms