RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 YTHDC2Q9H6S0 1430 aaKnown RBP29.29■■■□□ 2.28
CLN6-206ENST00000565471 TMEM132EQ6IEE7 984 aa29.29■■■□□ 2.28
CLN6-206ENST00000565471 DDX17Q92841 729 aaKnown RBP29.29■■■□□ 2.28
CLN6-206ENST00000565471 ORAI2Q96SN7 254 aa29.28■■■□□ 2.28
CLN6-206ENST00000565471 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.28
CLN6-206ENST00000565471 SOS2Q07890 1332 aaPredicted RBP29.25■■■□□ 2.27
CLN6-206ENST00000565471 WAPLQ7Z5K2 1190 aa29.25■■■□□ 2.27
CLN6-206ENST00000565471 SIRT1Q96EB6 747 aa29.25■■■□□ 2.27
CLN6-206ENST00000565471 ZNF772Q68DY9 489 aaPredicted RBP29.24■■■□□ 2.27
CLN6-206ENST00000565471 NUTM2BA6NNL0 878 aaPredicted RBP29.23■■■□□ 2.27
CLN6-206ENST00000565471 NUTM2EB1AL46 878 aaPredicted RBP29.23■■■□□ 2.27
CLN6-206ENST00000565471 NUTM2AQ8IVF1 878 aaPredicted RBP29.23■■■□□ 2.27
CLN6-206ENST00000565471 PLEKHH1Q9ULM0 1364 aa29.23■■■□□ 2.27
CLN6-206ENST00000565471 CFAP70Q5T0N1 1121 aa29.22■■■□□ 2.27
CLN6-206ENST00000565471 DHX57Q6P158 1386 aaKnown RBP29.22■■■□□ 2.27
CLN6-206ENST00000565471 ESCO1Q5FWF5 840 aa29.18■■■□□ 2.26
CLN6-206ENST00000565471 FMN2Q9NZ56 1722 aa29.17■■■□□ 2.26
CLN6-206ENST00000565471 NPHP3Q7Z494 1330 aa29.17■■■□□ 2.26
CLN6-206ENST00000565471 STAC3Q96MF2 364 aa29.15■■■□□ 2.26
CLN6-206ENST00000565471 DLC1Q96QB1 1528 aa29.15■■■□□ 2.26
CLN6-206ENST00000565471 ADGRB1O14514 1584 aa29.13■■■□□ 2.25
CLN6-206ENST00000565471 PXDNQ92626 1479 aa29.12■■■□□ 2.25
CLN6-206ENST00000565471 AFF2P51816 1311 aa29.12■■■□□ 2.25
CLN6-206ENST00000565471 COL22A1Q8NFW1 1626 aaPredicted RBP29.12■■■□□ 2.25
CLN6-206ENST00000565471 DCAF11Q8TEB1 546 aa29.1■■■□□ 2.25
CLN6-206ENST00000565471 KIF1AQ12756 1690 aa29.09■■■□□ 2.25
CLN6-206ENST00000565471 NUTM2FA1L443 756 aa29.09■■■□□ 2.25
CLN6-206ENST00000565471 FOXO3O43524 673 aa29.08■■■□□ 2.25
CLN6-206ENST00000565471 C8orf37Q96NL8 207 aa29.08■■■□□ 2.25
CLN6-206ENST00000565471 PRAM1Q96QH2 718 aa29.08■■■□□ 2.25
CLN6-206ENST00000565471 KDM2AQ9Y2K7 1162 aa29.07■■■□□ 2.24
CLN6-206ENST00000565471 RXRBP28702 533 aa29.05■■■□□ 2.24
CLN6-206ENST00000565471 CDK12Q9NYV4 1490 aaPredicted RBP29.04■■■□□ 2.24
CLN6-206ENST00000565471 ADAMTS2O95450 1211 aa29.03■■■□□ 2.24
CLN6-206ENST00000565471 POGKQ9P215 609 aa29.03■■■□□ 2.24
CLN6-206ENST00000565471 ADGRB2O60241 1585 aa29.03■■■□□ 2.24
CLN6-206ENST00000565471 XPCQ01831 940 aaPredicted RBP29.01■■■□□ 2.23
CLN6-206ENST00000565471 SAFB2Q14151 953 aaKnown RBP eCLIP29.01■■■□□ 2.23
CLN6-206ENST00000565471 NGLY1Q96IV0 654 aa29■■■□□ 2.23
CLN6-206ENST00000565471 RGPD8O14715 1765 aaPredicted RBP28.99■■■□□ 2.23
CLN6-206ENST00000565471 TRAK1Q9UPV9 953 aa28.99■■■□□ 2.23
CLN6-206ENST00000565471 ANKARQ7Z5J8 1434 aa28.98■■■□□ 2.23
CLN6-206ENST00000565471 PHF8Q9UPP1 1060 aa28.98■■■□□ 2.23
CLN6-206ENST00000565471 QTRT2Q9H974 415 aaKnown RBP28.96■■■□□ 2.23
CLN6-206ENST00000565471 SPATA31A3Q5VYP0 1347 aa28.95■■■□□ 2.23
CLN6-206ENST00000565471 USP32Q8NFA0 1604 aa28.94■■■□□ 2.22
CLN6-206ENST00000565471 RBM6P78332 1123 aaKnown RBP28.94■■■□□ 2.22
CLN6-206ENST00000565471 KRT28Q7Z3Y7 464 aa28.94■■■□□ 2.22
CLN6-206ENST00000565471 FNBP4Q8N3X1 1017 aaPredicted RBP28.94■■■□□ 2.22
CLN6-206ENST00000565471 MARF1Q9Y4F3 1742 aaKnown RBP28.93■■■□□ 2.22
CLN6-206ENST00000565471 EIF3AQ14152 1382 aaKnown RBP28.92■■■□□ 2.22
CLN6-206ENST00000565471 USP21Q9UK80 565 aa28.91■■■□□ 2.22
CLN6-206ENST00000565471 PSME1Q06323 249 aa28.9■■■□□ 2.22
CLN6-206ENST00000565471 TNS3Q68CZ2 1445 aa28.9■■■□□ 2.22
CLN6-206ENST00000565471 ARHGEF28Q8N1W1 1705 aaKnown RBP28.9■■■□□ 2.22
CLN6-206ENST00000565471 KIAA1210Q9ULL0 1709 aa28.9■■■□□ 2.22
CLN6-206ENST00000565471 MINK1Q8N4C8 1332 aaPredicted RBP28.89■■■□□ 2.21
CLN6-206ENST00000565471 SBNO1A3KN83 1393 aa28.88■■■□□ 2.21
CLN6-206ENST00000565471 RGS12O14924 1447 aa28.88■■■□□ 2.21
CLN6-206ENST00000565471 HIRIP3Q9BW71 556 aaPredicted RBP28.88■■■□□ 2.21
CLN6-206ENST00000565471 TRPC5Q9UL62 973 aaPredicted RBP28.88■■■□□ 2.21
CLN6-206ENST00000565471 TULP4Q9NRJ4 1543 aa28.88■■■□□ 2.21
CLN6-206ENST00000565471 ATRNO75882 1429 aa28.86■■■□□ 2.21
CLN6-206ENST00000565471 WASLO00401 505 aaPredicted RBP28.85■■■□□ 2.21
CLN6-206ENST00000565471 BCL9LQ86UU0 1499 aa28.84■■■□□ 2.21
CLN6-206ENST00000565471 UPF1Q92900 1129 aaKnown RBP eCLIP28.83■■■□□ 2.215e-10■■■■■ 36.7
CLN6-206ENST00000565471 PRR36Q9H6K5 1346 aa28.83■■■□□ 2.21
CLN6-206ENST00000565471 PMFBP1Q8TBY8 1022 aa28.82■■■□□ 2.2
CLN6-206ENST00000565471 ARHGEF10O15013 1369 aa28.82■■■□□ 2.2
CLN6-206ENST00000565471 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.79■■■□□ 2.2
CLN6-206ENST00000565471 TRPM3Q9HCF6 1732 aaPredicted RBP28.79■■■□□ 2.2
CLN6-206ENST00000565471 SLIT2O94813 1529 aa28.78■■■□□ 2.2
CLN6-206ENST00000565471 GPRASP1Q5JY77 1395 aa28.76■■■□□ 2.2
CLN6-206ENST00000565471 ITSN1Q15811 1721 aa28.76■■■□□ 2.19
CLN6-206ENST00000565471 ABCA3Q99758 1704 aa28.76■■■□□ 2.19
CLN6-206ENST00000565471 ATP7BP35670 1465 aa28.75■■■□□ 2.19
CLN6-206ENST00000565471 HAP1P54257 671 aaPredicted RBP28.74■■■□□ 2.19
CLN6-206ENST00000565471 NBPF1Q3BBV0 1214 aa28.74■■■□□ 2.19
CLN6-206ENST00000565471 LMOD2Q6P5Q4 547 aa28.74■■■□□ 2.19
CLN6-206ENST00000565471 CABLES1Q8TDN4 633 aa28.73■■■□□ 2.19
CLN6-206ENST00000565471 ALS2Q96Q42 1657 aa28.73■■■□□ 2.19
CLN6-206ENST00000565471 UNC5CLQ8IV45 518 aa28.72■■■□□ 2.19
CLN6-206ENST00000565471 NUDT16Q96DE0 195 aaKnown RBP28.71■■■□□ 2.19
CLN6-206ENST00000565471 NGDNQ8NEJ9 315 aaKnown RBP28.7■■■□□ 2.18
CLN6-206ENST00000565471 GJD4Q96KN9 370 aaPredicted RBP28.7■■■□□ 2.18
CLN6-206ENST00000565471 L3MBTL2Q969R5 705 aa28.69■■■□□ 2.18
CLN6-206ENST00000565471 CDK19Q9BWU1 502 aa28.69■■■□□ 2.18
CLN6-206ENST00000565471 NWD2Q9ULI1 1742 aa28.68■■■□□ 2.18
CLN6-206ENST00000565471 ATAD2Q6PL18 1390 aa28.67■■■□□ 2.18
CLN6-206ENST00000565471 PLCH1Q4KWH8 1693 aa28.67■■■□□ 2.18
CLN6-206ENST00000565471 TOPAZ1Q8N9V7 1692 aa28.67■■■□□ 2.18
CLN6-206ENST00000565471 SIN3AQ96ST3 1273 aa28.66■■■□□ 2.18
CLN6-206ENST00000565471 RALGAPBQ86X10 1494 aa28.65■■■□□ 2.18
CLN6-206ENST00000565471 GLI3P10071 1580 aa28.64■■■□□ 2.18
CLN6-206ENST00000565471 PLEKHG5O94827 1062 aa28.64■■■□□ 2.18
CLN6-206ENST00000565471 CENPJQ9HC77 1338 aaPredicted RBP28.64■■■□□ 2.17
CLN6-206ENST00000565471 CCDC61Q9Y6R9 512 aa28.63■■■□□ 2.17
CLN6-206ENST00000565471 POLR3AO14802 1390 aaPredicted RBP28.62■■■□□ 2.17
CLN6-206ENST00000565471 CRYBG1Q9Y4K1 1723 aa28.61■■■□□ 2.17
CLN6-206ENST00000565471 TRPM1Q7Z4N2 1603 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms