RNA–Protein interactions for RNA: ENST00000565345.5

SCAMP2-206, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-206ENST00000565345 LRP6O75581 1613 aa27.89■■■□□ 2.05
SCAMP2-206ENST00000565345 CFAP70Q5T0N1 1121 aa27.88■■■□□ 2.05
SCAMP2-206ENST00000565345 STAC3Q96MF2 364 aa27.88■■■□□ 2.05
SCAMP2-206ENST00000565345 WAPLQ7Z5K2 1190 aa27.87■■■□□ 2.05
SCAMP2-206ENST00000565345 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
SCAMP2-206ENST00000565345 ORAI2Q96SN7 254 aa27.85■■■□□ 2.05
SCAMP2-206ENST00000565345 PLEKHH1Q9ULM0 1364 aa27.85■■■□□ 2.05
SCAMP2-206ENST00000565345 DDX17Q92841 729 aaKnown RBP27.83■■■□□ 2.05
SCAMP2-206ENST00000565345 SOS2Q07890 1332 aaPredicted RBP27.83■■■□□ 2.05
SCAMP2-206ENST00000565345 POTEAQ6S8J7 498 aa27.82■■■□□ 2.04
SCAMP2-206ENST00000565345 DLC1Q96QB1 1528 aa27.81■■■□□ 2.04
SCAMP2-206ENST00000565345 PNPLA6Q8IY17 1366 aa27.8■■■□□ 2.04
SCAMP2-206ENST00000565345 ADGRB1O14514 1584 aa27.8■■■□□ 2.04
SCAMP2-206ENST00000565345 DCAF11Q8TEB1 546 aa27.79■■■□□ 2.04
SCAMP2-206ENST00000565345 FMN2Q9NZ56 1722 aa27.78■■■□□ 2.04
SCAMP2-206ENST00000565345 MEX3CQ5U5Q3 659 aaKnown RBP27.77■■■□□ 2.04
SCAMP2-206ENST00000565345 ESCO1Q5FWF5 840 aa27.76■■■□□ 2.03
SCAMP2-206ENST00000565345 NPHP3Q7Z494 1330 aa27.74■■■□□ 2.03
SCAMP2-206ENST00000565345 KDM2AQ9Y2K7 1162 aa27.74■■■□□ 2.03
SCAMP2-206ENST00000565345 ZNF772Q68DY9 489 aaPredicted RBP27.73■■■□□ 2.03
SCAMP2-206ENST00000565345 NUTM2BA6NNL0 878 aaPredicted RBP27.72■■■□□ 2.03
SCAMP2-206ENST00000565345 NUTM2EB1AL46 878 aaPredicted RBP27.72■■■□□ 2.03
SCAMP2-206ENST00000565345 NUTM2AQ8IVF1 878 aaPredicted RBP27.72■■■□□ 2.03
SCAMP2-206ENST00000565345 PXDNQ92626 1479 aa27.71■■■□□ 2.03
SCAMP2-206ENST00000565345 PRAM1Q96QH2 718 aa27.71■■■□□ 2.03
SCAMP2-206ENST00000565345 KIF1AQ12756 1690 aa27.7■■■□□ 2.02
SCAMP2-206ENST00000565345 COL22A1Q8NFW1 1626 aaPredicted RBP27.7■■■□□ 2.02
SCAMP2-206ENST00000565345 ADGRB2O60241 1585 aa27.69■■■□□ 2.02
SCAMP2-206ENST00000565345 NUTM2FA1L443 756 aa27.67■■■□□ 2.02
SCAMP2-206ENST00000565345 FOXO3O43524 673 aa27.66■■■□□ 2.02
SCAMP2-206ENST00000565345 POGKQ9P215 609 aa27.66■■■□□ 2.02
SCAMP2-206ENST00000565345 TRAK1Q9UPV9 953 aa27.64■■■□□ 2.02
SCAMP2-206ENST00000565345 KIAA1210Q9ULL0 1709 aa27.63■■■□□ 2.01
SCAMP2-206ENST00000565345 RGPD8O14715 1765 aaPredicted RBP27.63■■■□□ 2.01
SCAMP2-206ENST00000565345 ANKARQ7Z5J8 1434 aa27.62■■■□□ 2.01
SCAMP2-206ENST00000565345 SAFB2Q14151 953 aaKnown RBP eCLIP27.62■■■□□ 2.01
SCAMP2-206ENST00000565345 AFF2P51816 1311 aa27.62■■■□□ 2.01
SCAMP2-206ENST00000565345 PHF8Q9UPP1 1060 aa27.59■■■□□ 2.01
SCAMP2-206ENST00000565345 USP32Q8NFA0 1604 aa27.59■■■□□ 2.01
SCAMP2-206ENST00000565345 ARHGEF28Q8N1W1 1705 aaKnown RBP27.58■■■□□ 2.01
SCAMP2-206ENST00000565345 C8orf37Q96NL8 207 aa27.58■■■□□ 2.01
SCAMP2-206ENST00000565345 XPCQ01831 940 aaPredicted RBP27.57■■■□□ 2
SCAMP2-206ENST00000565345 EIF3AQ14152 1382 aaKnown RBP27.56■■■□□ 2
SCAMP2-206ENST00000565345 ADAMTS2O95450 1211 aa27.55■■■□□ 2
SCAMP2-206ENST00000565345 SPATA31A3Q5VYP0 1347 aa27.55■■■□□ 2
SCAMP2-206ENST00000565345 CDK12Q9NYV4 1490 aaPredicted RBP27.55■■■□□ 2
SCAMP2-206ENST00000565345 RXRBP28702 533 aa27.54■■■□□ 2
SCAMP2-206ENST00000565345 KRT28Q7Z3Y7 464 aa27.54■■■□□ 2
SCAMP2-206ENST00000565345 TULP4Q9NRJ4 1543 aa27.53■■■□□ 2
SCAMP2-206ENST00000565345 NGLY1Q96IV0 654 aa27.53■■■□□ 2
SCAMP2-206ENST00000565345 MINK1Q8N4C8 1332 aaPredicted RBP27.52■■■□□ 2
SCAMP2-206ENST00000565345 WASLO00401 505 aaPredicted RBP27.52■■■□□ 2
SCAMP2-206ENST00000565345 MARF1Q9Y4F3 1742 aaKnown RBP27.51■■□□□ 1.99
SCAMP2-206ENST00000565345 PSME1Q06323 249 aa27.51■■□□□ 1.99
SCAMP2-206ENST00000565345 FNBP4Q8N3X1 1017 aaPredicted RBP27.51■■□□□ 1.99
SCAMP2-206ENST00000565345 HIRIP3Q9BW71 556 aaPredicted RBP27.51■■□□□ 1.99
SCAMP2-206ENST00000565345 SBNO1A3KN83 1393 aa27.49■■□□□ 1.99
SCAMP2-206ENST00000565345 TNS3Q68CZ2 1445 aa27.49■■□□□ 1.99
SCAMP2-206ENST00000565345 QTRT2Q9H974 415 aaKnown RBP27.48■■□□□ 1.99
SCAMP2-206ENST00000565345 PRR36Q9H6K5 1346 aa27.47■■□□□ 1.99
SCAMP2-206ENST00000565345 RBM6P78332 1123 aaKnown RBP27.46■■□□□ 1.99
SCAMP2-206ENST00000565345 L3MBTL2Q969R5 705 aa27.46■■□□□ 1.99
SCAMP2-206ENST00000565345 NBPF1Q3BBV0 1214 aa27.45■■□□□ 1.98
SCAMP2-206ENST00000565345 PMFBP1Q8TBY8 1022 aa27.44■■□□□ 1.98
SCAMP2-206ENST00000565345 USP21Q9UK80 565 aa27.44■■□□□ 1.98
SCAMP2-206ENST00000565345 SIN3AQ96ST3 1273 aa27.43■■□□□ 1.98
SCAMP2-206ENST00000565345 ARHGEF10O15013 1369 aa27.42■■□□□ 1.98
SCAMP2-206ENST00000565345 ITSN1Q15811 1721 aa27.41■■□□□ 1.98
SCAMP2-206ENST00000565345 TRPM3Q9HCF6 1732 aaPredicted RBP27.41■■□□□ 1.98
SCAMP2-206ENST00000565345 ATP7BP35670 1465 aa27.41■■□□□ 1.98
SCAMP2-206ENST00000565345 TRPC5Q9UL62 973 aaPredicted RBP27.41■■□□□ 1.98
SCAMP2-206ENST00000565345 ATRNO75882 1429 aa27.4■■□□□ 1.98
SCAMP2-206ENST00000565345 BCL9LQ86UU0 1499 aa27.39■■□□□ 1.98
SCAMP2-206ENST00000565345 GPRASP1Q5JY77 1395 aa27.39■■□□□ 1.98
SCAMP2-206ENST00000565345 RGS12O14924 1447 aa27.38■■□□□ 1.97
SCAMP2-206ENST00000565345 NUDT16Q96DE0 195 aaKnown RBP27.37■■□□□ 1.97
SCAMP2-206ENST00000565345 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.37■■□□□ 1.97
SCAMP2-206ENST00000565345 ALS2Q96Q42 1657 aa27.36■■□□□ 1.97
SCAMP2-206ENST00000565345 SLIT2O94813 1529 aa27.36■■□□□ 1.97
SCAMP2-206ENST00000565345 ABCA3Q99758 1704 aa27.36■■□□□ 1.97
SCAMP2-206ENST00000565345 CDK19Q9BWU1 502 aa27.36■■□□□ 1.97
SCAMP2-206ENST00000565345 TRPM1Q7Z4N2 1603 aa27.36■■□□□ 1.97
SCAMP2-206ENST00000565345 TOPAZ1Q8N9V7 1692 aa27.34■■□□□ 1.97
SCAMP2-206ENST00000565345 NEUROD1Q13562 356 aa27.34■■□□□ 1.97
SCAMP2-206ENST00000565345 TRIM26Q12899 539 aaPredicted RBP27.33■■□□□ 1.97
SCAMP2-206ENST00000565345 NGDNQ8NEJ9 315 aaKnown RBP27.33■■□□□ 1.97
SCAMP2-206ENST00000565345 CENPJQ9HC77 1338 aaPredicted RBP27.33■■□□□ 1.97
SCAMP2-206ENST00000565345 LMOD2Q6P5Q4 547 aa27.31■■□□□ 1.96
SCAMP2-206ENST00000565345 CABLES1Q8TDN4 633 aa27.31■■□□□ 1.96
SCAMP2-206ENST00000565345 UPF1Q92900 1129 aaKnown RBP eCLIP27.31■■□□□ 1.96
SCAMP2-206ENST00000565345 CCDC61Q9Y6R9 512 aa27.31■■□□□ 1.96
SCAMP2-206ENST00000565345 HAP1P54257 671 aaPredicted RBP27.3■■□□□ 1.96
SCAMP2-206ENST00000565345 POLR3AO14802 1390 aaPredicted RBP27.3■■□□□ 1.96
SCAMP2-206ENST00000565345 UNC5CLQ8IV45 518 aa27.29■■□□□ 1.96
SCAMP2-206ENST00000565345 QRICH2Q9H0J4 1663 aa27.29■■□□□ 1.96
SCAMP2-206ENST00000565345 NWD2Q9ULI1 1742 aa27.28■■□□□ 1.96
SCAMP2-206ENST00000565345 PLEKHG3A1L390 1219 aa27.28■■□□□ 1.96
SCAMP2-206ENST00000565345 GJD4Q96KN9 370 aaPredicted RBP27.26■■□□□ 1.95
SCAMP2-206ENST00000565345 CRYBG1Q9Y4K1 1723 aa27.26■■□□□ 1.95
SCAMP2-206ENST00000565345 PLCH1Q4KWH8 1693 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms