RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 ABCC11Q96J66 1382 aa21.78■■□□□ 1.08
USB1-210ENST00000565151 YTHDC2Q9H6S0 1430 aaKnown RBP21.78■■□□□ 1.08
USB1-210ENST00000565151 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
USB1-210ENST00000565151 C14orf93Q9H972 538 aaKnown RBP21.77■■□□□ 1.08
USB1-210ENST00000565151 FMN2Q9NZ56 1722 aa21.77■■□□□ 1.08
USB1-210ENST00000565151 SPATA31A6Q5VVP1 1343 aa21.77■■□□□ 1.07
USB1-210ENST00000565151 HRCP23327 699 aa21.75■■□□□ 1.07
USB1-210ENST00000565151 ADGRB1O14514 1584 aa21.73■■□□□ 1.07
USB1-210ENST00000565151 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
USB1-210ENST00000565151 SOS2Q07890 1332 aaPredicted RBP21.71■■□□□ 1.07
USB1-210ENST00000565151 NUTM2BA6NNL0 878 aaPredicted RBP21.7■■□□□ 1.06
USB1-210ENST00000565151 NUTM2EB1AL46 878 aaPredicted RBP21.7■■□□□ 1.06
USB1-210ENST00000565151 NUTM2AQ8IVF1 878 aaPredicted RBP21.7■■□□□ 1.06
USB1-210ENST00000565151 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
USB1-210ENST00000565151 LRRC59Q96AG4 307 aaKnown RBP21.69■■□□□ 1.06
USB1-210ENST00000565151 NUTM2FA1L443 756 aa21.68■■□□□ 1.06
USB1-210ENST00000565151 PXDNQ92626 1479 aa21.68■■□□□ 1.06
USB1-210ENST00000565151 COL22A1Q8NFW1 1626 aaPredicted RBP21.67■■□□□ 1.06
USB1-210ENST00000565151 SIRT1Q96EB6 747 aa21.66■■□□□ 1.06
USB1-210ENST00000565151 USP32Q8NFA0 1604 aa21.66■■□□□ 1.06
USB1-210ENST00000565151 KDM2AQ9Y2K7 1162 aa21.65■■□□□ 1.06
USB1-210ENST00000565151 DLC1Q96QB1 1528 aa21.65■■□□□ 1.06
USB1-210ENST00000565151 ESCO1Q5FWF5 840 aa21.64■■□□□ 1.05
USB1-210ENST00000565151 MEX3CQ5U5Q3 659 aaKnown RBP21.64■■□□□ 1.05
USB1-210ENST00000565151 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
USB1-210ENST00000565151 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
USB1-210ENST00000565151 ARHGEF28Q8N1W1 1705 aaKnown RBP21.61■■□□□ 1.05
USB1-210ENST00000565151 KIF1AQ12756 1690 aa21.61■■□□□ 1.05
USB1-210ENST00000565151 FOXO3O43524 673 aa21.61■■□□□ 1.05
USB1-210ENST00000565151 XPCQ01831 940 aaPredicted RBP21.61■■□□□ 1.05
USB1-210ENST00000565151 PRAM1Q96QH2 718 aa21.61■■□□□ 1.05
USB1-210ENST00000565151 AFF2P51816 1311 aa21.6■■□□□ 1.05
USB1-210ENST00000565151 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.05
USB1-210ENST00000565151 ADGRB2O60241 1585 aa21.59■■□□□ 1.05
USB1-210ENST00000565151 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
USB1-210ENST00000565151 NPHP3Q7Z494 1330 aa21.56■■□□□ 1.04
USB1-210ENST00000565151 ADAMTS2O95450 1211 aa21.56■■□□□ 1.04
USB1-210ENST00000565151 ZNF772Q68DY9 489 aaPredicted RBP21.56■■□□□ 1.04
USB1-210ENST00000565151 C8orf37Q96NL8 207 aa21.56■■□□□ 1.04
USB1-210ENST00000565151 KIAA1210Q9ULL0 1709 aa21.55■■□□□ 1.04
USB1-210ENST00000565151 ABCA3Q99758 1704 aa21.52■■□□□ 1.03
USB1-210ENST00000565151 TRPM3Q9HCF6 1732 aaPredicted RBP21.52■■□□□ 1.03
USB1-210ENST00000565151 HIRIP3Q9BW71 556 aaPredicted RBP21.51■■□□□ 1.03
USB1-210ENST00000565151 PRR36Q9H6K5 1346 aa21.51■■□□□ 1.03
USB1-210ENST00000565151 POGKQ9P215 609 aa21.5■■□□□ 1.03
USB1-210ENST00000565151 PHF8Q9UPP1 1060 aa21.5■■□□□ 1.03
USB1-210ENST00000565151 SPATA31A3Q5VYP0 1347 aa21.5■■□□□ 1.03
USB1-210ENST00000565151 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
USB1-210ENST00000565151 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
USB1-210ENST00000565151 RXRBP28702 533 aa21.48■■□□□ 1.03
USB1-210ENST00000565151 KRT28Q7Z3Y7 464 aa21.48■■□□□ 1.03
USB1-210ENST00000565151 NGLY1Q96IV0 654 aa21.47■■□□□ 1.03
USB1-210ENST00000565151 QTRT2Q9H974 415 aaKnown RBP21.47■■□□□ 1.03
USB1-210ENST00000565151 ANKARQ7Z5J8 1434 aa21.46■■□□□ 1.03
USB1-210ENST00000565151 CDK12Q9NYV4 1490 aaPredicted RBP21.46■■□□□ 1.03
USB1-210ENST00000565151 NBPF1Q3BBV0 1214 aa21.46■■□□□ 1.03
USB1-210ENST00000565151 FNBP4Q8N3X1 1017 aaPredicted RBP21.46■■□□□ 1.03
USB1-210ENST00000565151 ALS2Q96Q42 1657 aa21.46■■□□□ 1.03
USB1-210ENST00000565151 RGS12O14924 1447 aa21.46■■□□□ 1.03
USB1-210ENST00000565151 TULP4Q9NRJ4 1543 aa21.45■■□□□ 1.02
USB1-210ENST00000565151 PMFBP1Q8TBY8 1022 aa21.45■■□□□ 1.02
USB1-210ENST00000565151 BCL9LQ86UU0 1499 aa21.45■■□□□ 1.02
USB1-210ENST00000565151 SIN3AQ96ST3 1273 aa21.44■■□□□ 1.02
USB1-210ENST00000565151 TNS3Q68CZ2 1445 aa21.43■■□□□ 1.02
USB1-210ENST00000565151 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
USB1-210ENST00000565151 WASLO00401 505 aaPredicted RBP21.42■■□□□ 1.02
USB1-210ENST00000565151 ATRNO75882 1429 aa21.42■■□□□ 1.02
USB1-210ENST00000565151 ITSN1Q15811 1721 aa21.42■■□□□ 1.02
USB1-210ENST00000565151 USP21Q9UK80 565 aa21.42■■□□□ 1.02
USB1-210ENST00000565151 CRYBG1Q9Y4K1 1723 aa21.42■■□□□ 1.02
USB1-210ENST00000565151 TOPAZ1Q8N9V7 1692 aa21.41■■□□□ 1.02
USB1-210ENST00000565151 RBM6P78332 1123 aaKnown RBP21.41■■□□□ 1.02
USB1-210ENST00000565151 CABLES1Q8TDN4 633 aa21.41■■□□□ 1.02
USB1-210ENST00000565151 ATP7BP35670 1465 aa21.4■■□□□ 1.02
USB1-210ENST00000565151 SBNO1A3KN83 1393 aa21.4■■□□□ 1.02
USB1-210ENST00000565151 PLCH1Q4KWH8 1693 aa21.4■■□□□ 1.02
USB1-210ENST00000565151 EP400Q96L91 3159 aa21.4■■□□□ 1.02
USB1-210ENST00000565151 UPF1Q92900 1129 aaKnown RBP eCLIP21.39■■□□□ 1.01
USB1-210ENST00000565151 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.01
USB1-210ENST00000565151 TRPM1Q7Z4N2 1603 aa21.39■■□□□ 1.01
USB1-210ENST00000565151 SLIT2O94813 1529 aa21.38■■□□□ 1.01
USB1-210ENST00000565151 PSME1Q06323 249 aa21.37■■□□□ 1.01
USB1-210ENST00000565151 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
USB1-210ENST00000565151 GLI3P10071 1580 aa21.36■■□□□ 1.01
USB1-210ENST00000565151 BRWD3Q6RI45 1802 aa21.35■■□□□ 1.01
USB1-210ENST00000565151 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
USB1-210ENST00000565151 TRPC5Q9UL62 973 aaPredicted RBP21.35■■□□□ 1.01
USB1-210ENST00000565151 NWD2Q9ULI1 1742 aa21.35■■□□□ 1.01
USB1-210ENST00000565151 NUDT16Q96DE0 195 aaKnown RBP21.33■■□□□ 1.01
USB1-210ENST00000565151 CDK19Q9BWU1 502 aa21.33■■□□□ 1.01
USB1-210ENST00000565151 NRAPQ86VF7 1730 aa21.32■■□□□ 1
USB1-210ENST00000565151 EIF3AQ14152 1382 aaKnown RBP21.32■■□□□ 1
USB1-210ENST00000565151 NEUROD1Q13562 356 aa21.3■■□□□ 1
USB1-210ENST00000565151 LMOD2Q6P5Q4 547 aa21.3■■□□□ 1
USB1-210ENST00000565151 ARHGEF10O15013 1369 aa21.3■■□□□ 1
USB1-210ENST00000565151 RALGAPBQ86X10 1494 aa21.28■■□□□ 1
USB1-210ENST00000565151 FAM83GA6ND36 823 aa21.28■■□□□ 1
USB1-210ENST00000565151 UNC5CLQ8IV45 518 aa21.28■■□□□ 1
USB1-210ENST00000565151 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
USB1-210ENST00000565151 GJD4Q96KN9 370 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms