RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
CMTM3-209ENST00000565003 YTHDC2Q9H6S0 1430 aaKnown RBP14.8□□□□□ -0.04
CMTM3-209ENST00000565003 C14orf93Q9H972 538 aaKnown RBP14.79□□□□□ -0.04
CMTM3-209ENST00000565003 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
CMTM3-209ENST00000565003 HRCP23327 699 aa14.78□□□□□ -0.04
CMTM3-209ENST00000565003 CFAP70Q5T0N1 1121 aa14.78□□□□□ -0.04
CMTM3-209ENST00000565003 LRRC59Q96AG4 307 aaKnown RBP14.78□□□□□ -0.04
CMTM3-209ENST00000565003 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
CMTM3-209ENST00000565003 NUTM2BA6NNL0 878 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-209ENST00000565003 NUTM2EB1AL46 878 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-209ENST00000565003 NUTM2AQ8IVF1 878 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-209ENST00000565003 SOS2Q07890 1332 aaPredicted RBP14.75□□□□□ -0.05
CMTM3-209ENST00000565003 ADGRB1O14514 1584 aa14.74□□□□□ -0.05
CMTM3-209ENST00000565003 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
CMTM3-209ENST00000565003 FMN2Q9NZ56 1722 aa14.73□□□□□ -0.05
CMTM3-209ENST00000565003 NUTM2FA1L443 756 aa14.73□□□□□ -0.05
CMTM3-209ENST00000565003 ESCO1Q5FWF5 840 aa14.73□□□□□ -0.05
CMTM3-209ENST00000565003 SIRT1Q96EB6 747 aa14.72□□□□□ -0.05
CMTM3-209ENST00000565003 DLC1Q96QB1 1528 aa14.71□□□□□ -0.05
CMTM3-209ENST00000565003 PXDNQ92626 1479 aa14.71□□□□□ -0.05
CMTM3-209ENST00000565003 ZNF772Q68DY9 489 aaPredicted RBP14.71□□□□□ -0.05
CMTM3-209ENST00000565003 DCAF11Q8TEB1 546 aa14.71□□□□□ -0.05
CMTM3-209ENST00000565003 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
CMTM3-209ENST00000565003 NPHP3Q7Z494 1330 aa14.7□□□□□ -0.06
CMTM3-209ENST00000565003 AFF2P51816 1311 aa14.69□□□□□ -0.06
CMTM3-209ENST00000565003 FOXO3O43524 673 aa14.69□□□□□ -0.06
CMTM3-209ENST00000565003 XPCQ01831 940 aaPredicted RBP14.69□□□□□ -0.06
CMTM3-209ENST00000565003 SAFB2Q14151 953 aaKnown RBP eCLIP14.69□□□□□ -0.06
CMTM3-209ENST00000565003 PRAM1Q96QH2 718 aa14.69□□□□□ -0.06
CMTM3-209ENST00000565003 COL22A1Q8NFW1 1626 aaPredicted RBP14.69□□□□□ -0.06
CMTM3-209ENST00000565003 C8orf37Q96NL8 207 aa14.68□□□□□ -0.06
CMTM3-209ENST00000565003 ADAMTS2O95450 1211 aa14.67□□□□□ -0.06
CMTM3-209ENST00000565003 ADGRB2O60241 1585 aa14.67□□□□□ -0.06
CMTM3-209ENST00000565003 KIF1AQ12756 1690 aa14.67□□□□□ -0.06
CMTM3-209ENST00000565003 RGPD8O14715 1765 aaPredicted RBP14.66□□□□□ -0.06
CMTM3-209ENST00000565003 TRAK1Q9UPV9 953 aa14.66□□□□□ -0.06
CMTM3-209ENST00000565003 STAC3Q96MF2 364 aa14.65□□□□□ -0.06
CMTM3-209ENST00000565003 POGKQ9P215 609 aa14.65□□□□□ -0.06
CMTM3-209ENST00000565003 USP32Q8NFA0 1604 aa14.65□□□□□ -0.06
CMTM3-209ENST00000565003 RXRBP28702 533 aa14.63□□□□□ -0.07
CMTM3-209ENST00000565003 ANKARQ7Z5J8 1434 aa14.62□□□□□ -0.07
CMTM3-209ENST00000565003 ARHGEF28Q8N1W1 1705 aaKnown RBP14.62□□□□□ -0.07
CMTM3-209ENST00000565003 NGLY1Q96IV0 654 aa14.62□□□□□ -0.07
CMTM3-209ENST00000565003 HIRIP3Q9BW71 556 aaPredicted RBP14.62□□□□□ -0.07
CMTM3-209ENST00000565003 PHF8Q9UPP1 1060 aa14.62□□□□□ -0.07
CMTM3-209ENST00000565003 CDK12Q9NYV4 1490 aaPredicted RBP14.62□□□□□ -0.07
CMTM3-209ENST00000565003 SPATA31A3Q5VYP0 1347 aa14.62□□□□□ -0.07
CMTM3-209ENST00000565003 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
CMTM3-209ENST00000565003 KRT28Q7Z3Y7 464 aa14.6□□□□□ -0.07
CMTM3-209ENST00000565003 QTRT2Q9H974 415 aaKnown RBP14.6□□□□□ -0.07
CMTM3-209ENST00000565003 RGS12O14924 1447 aa14.59□□□□□ -0.07
CMTM3-209ENST00000565003 MARF1Q9Y4F3 1742 aaKnown RBP14.59□□□□□ -0.07
CMTM3-209ENST00000565003 FNBP4Q8N3X1 1017 aaPredicted RBP14.59□□□□□ -0.07
CMTM3-209ENST00000565003 USP21Q9UK80 565 aa14.59□□□□□ -0.07
CMTM3-209ENST00000565003 TULP4Q9NRJ4 1543 aa14.59□□□□□ -0.07
CMTM3-209ENST00000565003 PRR36Q9H6K5 1346 aa14.59□□□□□ -0.07
CMTM3-209ENST00000565003 TNS3Q68CZ2 1445 aa14.58□□□□□ -0.07
CMTM3-209ENST00000565003 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.07
CMTM3-209ENST00000565003 PMFBP1Q8TBY8 1022 aa14.58□□□□□ -0.08
CMTM3-209ENST00000565003 WASLO00401 505 aaPredicted RBP14.57□□□□□ -0.08
CMTM3-209ENST00000565003 RBM6P78332 1123 aaKnown RBP14.57□□□□□ -0.08
CMTM3-209ENST00000565003 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
CMTM3-209ENST00000565003 EIF3AQ14152 1382 aaKnown RBP14.57□□□□□ -0.08
CMTM3-209ENST00000565003 ATRNO75882 1429 aa14.56□□□□□ -0.08
CMTM3-209ENST00000565003 BCL9LQ86UU0 1499 aa14.56□□□□□ -0.08
CMTM3-209ENST00000565003 PSME1Q06323 249 aa14.55□□□□□ -0.08
CMTM3-209ENST00000565003 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
CMTM3-209ENST00000565003 TRPC5Q9UL62 973 aaPredicted RBP14.55□□□□□ -0.08
CMTM3-209ENST00000565003 TRPM3Q9HCF6 1732 aaPredicted RBP14.55□□□□□ -0.08
CMTM3-209ENST00000565003 ATP7BP35670 1465 aa14.54□□□□□ -0.08
CMTM3-209ENST00000565003 ABCA3Q99758 1704 aa14.54□□□□□ -0.08
CMTM3-209ENST00000565003 ARHGEF10O15013 1369 aa14.53□□□□□ -0.08
CMTM3-209ENST00000565003 CABLES1Q8TDN4 633 aa14.53□□□□□ -0.08
CMTM3-209ENST00000565003 UPF1Q92900 1129 aaKnown RBP eCLIP14.53□□□□□ -0.08
CMTM3-209ENST00000565003 SIN3AQ96ST3 1273 aa14.53□□□□□ -0.08
CMTM3-209ENST00000565003 SLIT2O94813 1529 aa14.52□□□□□ -0.08
CMTM3-209ENST00000565003 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
CMTM3-209ENST00000565003 LMOD2Q6P5Q4 547 aa14.52□□□□□ -0.09
CMTM3-209ENST00000565003 L3MBTL2Q969R5 705 aa14.52□□□□□ -0.09
CMTM3-209ENST00000565003 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.52□□□□□ -0.09
CMTM3-209ENST00000565003 ALS2Q96Q42 1657 aa14.52□□□□□ -0.09
CMTM3-209ENST00000565003 GPRASP1Q5JY77 1395 aa14.51□□□□□ -0.09
CMTM3-209ENST00000565003 ITSN1Q15811 1721 aa14.51□□□□□ -0.09
CMTM3-209ENST00000565003 TOPAZ1Q8N9V7 1692 aa14.5□□□□□ -0.09
CMTM3-209ENST00000565003 NUDT16Q96DE0 195 aaKnown RBP14.5□□□□□ -0.09
CMTM3-209ENST00000565003 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
CMTM3-209ENST00000565003 CDK19Q9BWU1 502 aa14.49□□□□□ -0.09
CMTM3-209ENST00000565003 GLI3P10071 1580 aa14.48□□□□□ -0.09
CMTM3-209ENST00000565003 NEUROD1Q13562 356 aa14.48□□□□□ -0.09
CMTM3-209ENST00000565003 UNC5CLQ8IV45 518 aa14.48□□□□□ -0.09
CMTM3-209ENST00000565003 NGDNQ8NEJ9 315 aaKnown RBP14.48□□□□□ -0.09
CMTM3-209ENST00000565003 PLCH1Q4KWH8 1693 aa14.48□□□□□ -0.09
CMTM3-209ENST00000565003 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
CMTM3-209ENST00000565003 TRPM1Q7Z4N2 1603 aa14.47□□□□□ -0.09
CMTM3-209ENST00000565003 CRYBG1Q9Y4K1 1723 aa14.46□□□□□ -0.09
CMTM3-209ENST00000565003 CENPJQ9HC77 1338 aaPredicted RBP14.46□□□□□ -0.09
CMTM3-209ENST00000565003 RALGAPBQ86X10 1494 aa14.46□□□□□ -0.09
CMTM3-209ENST00000565003 QRICH2Q9H0J4 1663 aa14.46□□□□□ -0.1
CMTM3-209ENST00000565003 NWD2Q9ULI1 1742 aa14.45□□□□□ -0.1
CMTM3-209ENST00000565003 CCDC61Q9Y6R9 512 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms