RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 MROH1Q8NDA8 1641 aa20.77■□□□□ 0.92
LINC00554-201ENST00000564841 TNNT2P45379 298 aaPredicted RBP20.77■□□□□ 0.91
LINC00554-201ENST00000564841 ZMYM4Q5VZL5 1548 aa20.77■□□□□ 0.91
LINC00554-201ENST00000564841 GPRASP1Q5JY77 1395 aa20.77■□□□□ 0.91
LINC00554-201ENST00000564841 TRAK2O60296 914 aa20.76■□□□□ 0.91
LINC00554-201ENST00000564841 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
LINC00554-201ENST00000564841 ESPNB1AK53 854 aa20.75■□□□□ 0.91
LINC00554-201ENST00000564841 NOS1P29475 1434 aa20.75■□□□□ 0.91
LINC00554-201ENST00000564841 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
LINC00554-201ENST00000564841 HECW2Q9P2P5 1572 aa20.75■□□□□ 0.91
LINC00554-201ENST00000564841 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
LINC00554-201ENST00000564841 STK26Q9P289 416 aa20.74■□□□□ 0.91
LINC00554-201ENST00000564841 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
LINC00554-201ENST00000564841 STAG3Q9UJ98 1225 aa20.73■□□□□ 0.91
LINC00554-201ENST00000564841 PPRC1Q5VV67 1664 aaKnown RBP20.73■□□□□ 0.91
LINC00554-201ENST00000564841 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
LINC00554-201ENST00000564841 FRMPD1Q5SYB0 1578 aa20.73■□□□□ 0.91
LINC00554-201ENST00000564841 PPP2R1AP30153 589 aa20.73■□□□□ 0.91
LINC00554-201ENST00000564841 IDI1Q13907 227 aa20.73■□□□□ 0.91
LINC00554-201ENST00000564841 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
LINC00554-201ENST00000564841 NEUROD2Q15784 382 aa20.72■□□□□ 0.91
LINC00554-201ENST00000564841 NLRP1Q9C000 1473 aa20.72■□□□□ 0.91
LINC00554-201ENST00000564841 NEO1Q92859 1461 aa20.71■□□□□ 0.91
LINC00554-201ENST00000564841 PODXL2Q9NZ53 605 aa20.71■□□□□ 0.91
LINC00554-201ENST00000564841 ZNF521Q96K83 1311 aa20.71■□□□□ 0.91
LINC00554-201ENST00000564841 GRPEL1Q9HAV7 217 aa20.71■□□□□ 0.91
LINC00554-201ENST00000564841 EFCAB6Q5THR3 1501 aa20.71■□□□□ 0.91
LINC00554-201ENST00000564841 APAF1O14727 1248 aa20.7■□□□□ 0.9
LINC00554-201ENST00000564841 TNNQ9UQP3 1299 aa20.7■□□□□ 0.9
LINC00554-201ENST00000564841 TBC1D32Q96NH3 1257 aa20.7■□□□□ 0.9
LINC00554-201ENST00000564841 VWDEQ8N2E2 1590 aa20.69■□□□□ 0.9
LINC00554-201ENST00000564841 GAS2L3Q86XJ1 694 aa20.68■□□□□ 0.9
LINC00554-201ENST00000564841 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
LINC00554-201ENST00000564841 COL17A1Q9UMD9 1497 aaPredicted RBP20.68■□□□□ 0.9
LINC00554-201ENST00000564841 MRE11P49959 708 aa20.68■□□□□ 0.9
LINC00554-201ENST00000564841 MADDQ8WXG6 1647 aa20.68■□□□□ 0.9
LINC00554-201ENST00000564841 EIF2AK4Q9P2K8 1649 aaKnown RBP20.68■□□□□ 0.9
LINC00554-201ENST00000564841 RBM10P98175 930 aaKnown RBP20.67■□□□□ 0.9
LINC00554-201ENST00000564841 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
LINC00554-201ENST00000564841 CLUAP1Q96AJ1 413 aa20.67■□□□□ 0.9
LINC00554-201ENST00000564841 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
LINC00554-201ENST00000564841 ARID3AQ99856 593 aa20.66■□□□□ 0.9
LINC00554-201ENST00000564841 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
LINC00554-201ENST00000564841 UPF2Q9HAU5 1272 aaKnown RBP20.65■□□□□ 0.9
LINC00554-201ENST00000564841 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
LINC00554-201ENST00000564841 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
LINC00554-201ENST00000564841 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.89
LINC00554-201ENST00000564841 TRIM44Q96DX7 344 aaPredicted RBP20.63■□□□□ 0.89
LINC00554-201ENST00000564841 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
LINC00554-201ENST00000564841 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
LINC00554-201ENST00000564841 ABCC3O15438 1527 aa20.63■□□□□ 0.89
LINC00554-201ENST00000564841 MAPK8IP3Q9UPT6 1336 aa20.62■□□□□ 0.89
LINC00554-201ENST00000564841 MFAP1P55081 439 aaKnown RBP20.62■□□□□ 0.89
LINC00554-201ENST00000564841 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
LINC00554-201ENST00000564841 PDZRN3Q9UPQ7 1066 aa20.62■□□□□ 0.89
LINC00554-201ENST00000564841 KIAA1211Q6ZU35 1233 aa20.62■□□□□ 0.89
LINC00554-201ENST00000564841 KIF1BO60333 1816 aa20.62■□□□□ 0.89
LINC00554-201ENST00000564841 CDCA8Q53HL2 280 aa20.62■□□□□ 0.89
LINC00554-201ENST00000564841 ESF1Q9H501 851 aaKnown RBP20.61■□□□□ 0.89
LINC00554-201ENST00000564841 MROH2AA6NES4 1674 aa20.61■□□□□ 0.89
LINC00554-201ENST00000564841 STAC3Q96MF2 364 aa20.61■□□□□ 0.89
LINC00554-201ENST00000564841 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
LINC00554-201ENST00000564841 TRMT2AQ8IZ69 625 aaKnown RBP20.6■□□□□ 0.89
LINC00554-201ENST00000564841 A0A0U1RQG5 324 aaPredicted RBP20.59■□□□□ 0.89
LINC00554-201ENST00000564841 CHMP5Q9NZZ3 219 aa20.59■□□□□ 0.89
LINC00554-201ENST00000564841 RLBP1P12271 317 aa20.59■□□□□ 0.89
LINC00554-201ENST00000564841 SLC12A5Q9H2X9 1139 aa20.59■□□□□ 0.89
LINC00554-201ENST00000564841 MAP3K4Q9Y6R4 1608 aa20.58■□□□□ 0.89
LINC00554-201ENST00000564841 VGFO15240 615 aaPredicted RBP20.58■□□□□ 0.88
LINC00554-201ENST00000564841 C14orf93Q9H972 538 aaKnown RBP20.57■□□□□ 0.88
LINC00554-201ENST00000564841 RICTORQ6R327 1708 aa20.56■□□□□ 0.88
LINC00554-201ENST00000564841 PDCL3Q9H2J4 239 aa20.56■□□□□ 0.88
LINC00554-201ENST00000564841 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
LINC00554-201ENST00000564841 CGNL1Q0VF96 1302 aa20.55■□□□□ 0.88
LINC00554-201ENST00000564841 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
LINC00554-201ENST00000564841 NKTRP30414 1462 aaKnown RBP20.55■□□□□ 0.88
LINC00554-201ENST00000564841 C22orf23Q9BZE7 217 aa20.55■□□□□ 0.88
LINC00554-201ENST00000564841 TRHP20396 242 aaPredicted RBP20.54■□□□□ 0.88
LINC00554-201ENST00000564841 CABP2Q9NPB3 220 aa20.54■□□□□ 0.88
LINC00554-201ENST00000564841 INSRP06213 1382 aa20.54■□□□□ 0.88
LINC00554-201ENST00000564841 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
LINC00554-201ENST00000564841 LMTK2Q8IWU2 1503 aa20.53■□□□□ 0.88
LINC00554-201ENST00000564841 FAM13BQ9NYF5 915 aa20.53■□□□□ 0.88
LINC00554-201ENST00000564841 PRDM4Q9UKN5 801 aa20.53■□□□□ 0.88
LINC00554-201ENST00000564841 MINK1Q8N4C8 1332 aaPredicted RBP20.52■□□□□ 0.88
LINC00554-201ENST00000564841 RIPK4P57078 832 aa20.52■□□□□ 0.88
LINC00554-201ENST00000564841 ZNF692Q9BU19 519 aaPredicted RBP20.52■□□□□ 0.88
LINC00554-201ENST00000564841 SIGLEC1Q9BZZ2 1709 aa20.52■□□□□ 0.88
LINC00554-201ENST00000564841 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.87
LINC00554-201ENST00000564841 SLC52A1Q9NWF4 448 aa20.51■□□□□ 0.87
LINC00554-201ENST00000564841 TPM2P07951 284 aa20.51■□□□□ 0.87
LINC00554-201ENST00000564841 PDE3AQ14432 1141 aa20.51■□□□□ 0.87
LINC00554-201ENST00000564841 CAMSAP1Q5T5Y3 1602 aa20.51■□□□□ 0.87
LINC00554-201ENST00000564841 TNPO1Q92973 898 aaKnown RBP20.5■□□□□ 0.87
LINC00554-201ENST00000564841 E9PSI1 815 aa20.5■□□□□ 0.87
LINC00554-201ENST00000564841 SRPK2P78362 688 aaKnown RBP20.5■□□□□ 0.87
LINC00554-201ENST00000564841 IQGAP1P46940 1657 aa20.49■□□□□ 0.87
LINC00554-201ENST00000564841 LAMC1P11047 1609 aa20.49■□□□□ 0.87
LINC00554-201ENST00000564841 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
LINC00554-201ENST00000564841 MYOM2P54296 1465 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms