RNA–Protein interactions for RNA: ENST00000564839.1

EIF3C-205, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-205ENST00000564839 PNPLA6Q8IY17 1366 aa16.11■□□□□ 0.17
EIF3C-205ENST00000564839 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
EIF3C-205ENST00000564839 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
EIF3C-205ENST00000564839 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
EIF3C-205ENST00000564839 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
EIF3C-205ENST00000564839 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
EIF3C-205ENST00000564839 YTHDC2Q9H6S0 1430 aaKnown RBP16.08■□□□□ 0.16
EIF3C-205ENST00000564839 TMEM132EQ6IEE7 984 aa16.07■□□□□ 0.16
EIF3C-205ENST00000564839 SIRT1Q96EB6 747 aa16.07■□□□□ 0.16
EIF3C-205ENST00000564839 PLEKHH1Q9ULM0 1364 aa16.07■□□□□ 0.16
EIF3C-205ENST00000564839 COL22A1Q8NFW1 1626 aaPredicted RBP16.06■□□□□ 0.16
EIF3C-205ENST00000564839 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
EIF3C-205ENST00000564839 FMN2Q9NZ56 1722 aa16.05■□□□□ 0.16
EIF3C-205ENST00000564839 PXDNQ92626 1479 aa16.04■□□□□ 0.16
EIF3C-205ENST00000564839 ZNF772Q68DY9 489 aaPredicted RBP16.04■□□□□ 0.16
EIF3C-205ENST00000564839 ADGRB1O14514 1584 aa16.04■□□□□ 0.16
EIF3C-205ENST00000564839 CFAP70Q5T0N1 1121 aa16.03■□□□□ 0.16
EIF3C-205ENST00000564839 STK26Q9P289 416 aa16.03■□□□□ 0.16
EIF3C-205ENST00000564839 DLC1Q96QB1 1528 aa16.02■□□□□ 0.15
EIF3C-205ENST00000564839 MEX3CQ5U5Q3 659 aaKnown RBP16.01■□□□□ 0.15
EIF3C-205ENST00000564839 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
EIF3C-205ENST00000564839 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
EIF3C-205ENST00000564839 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
EIF3C-205ENST00000564839 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
EIF3C-205ENST00000564839 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
EIF3C-205ENST00000564839 AFF2P51816 1311 aa15.99■□□□□ 0.15
EIF3C-205ENST00000564839 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
EIF3C-205ENST00000564839 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
EIF3C-205ENST00000564839 KIF1AQ12756 1690 aa15.98■□□□□ 0.15
EIF3C-205ENST00000564839 ADGRB2O60241 1585 aa15.97■□□□□ 0.15
EIF3C-205ENST00000564839 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
EIF3C-205ENST00000564839 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
EIF3C-205ENST00000564839 FOXO3O43524 673 aa15.95■□□□□ 0.14
EIF3C-205ENST00000564839 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
EIF3C-205ENST00000564839 MARF1Q9Y4F3 1742 aaKnown RBP15.94■□□□□ 0.14
EIF3C-205ENST00000564839 RXRBP28702 533 aa15.94■□□□□ 0.14
EIF3C-205ENST00000564839 NUTM2FA1L443 756 aa15.93■□□□□ 0.14
EIF3C-205ENST00000564839 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
EIF3C-205ENST00000564839 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
EIF3C-205ENST00000564839 PRAM1Q96QH2 718 aa15.93■□□□□ 0.14
EIF3C-205ENST00000564839 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
EIF3C-205ENST00000564839 DCAF11Q8TEB1 546 aa15.92■□□□□ 0.14
EIF3C-205ENST00000564839 SPATA31A3Q5VYP0 1347 aa15.92■□□□□ 0.14
EIF3C-205ENST00000564839 ADAMTS2O95450 1211 aa15.91■□□□□ 0.14
EIF3C-205ENST00000564839 QTRT2Q9H974 415 aaKnown RBP15.91■□□□□ 0.14
EIF3C-205ENST00000564839 RGS12O14924 1447 aa15.91■□□□□ 0.14
EIF3C-205ENST00000564839 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
EIF3C-205ENST00000564839 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
EIF3C-205ENST00000564839 ARHGEF28Q8N1W1 1705 aaKnown RBP15.89■□□□□ 0.13
EIF3C-205ENST00000564839 ATRNO75882 1429 aa15.89■□□□□ 0.13
EIF3C-205ENST00000564839 RBM6P78332 1123 aaKnown RBP15.89■□□□□ 0.13
EIF3C-205ENST00000564839 UPF1Q92900 1129 aaKnown RBP eCLIP15.89■□□□□ 0.13
EIF3C-205ENST00000564839 NGLY1Q96IV0 654 aa15.89■□□□□ 0.13
EIF3C-205ENST00000564839 BCL9LQ86UU0 1499 aa15.89■□□□□ 0.13
EIF3C-205ENST00000564839 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
EIF3C-205ENST00000564839 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
EIF3C-205ENST00000564839 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
EIF3C-205ENST00000564839 KIAA1210Q9ULL0 1709 aa15.88■□□□□ 0.13
EIF3C-205ENST00000564839 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
EIF3C-205ENST00000564839 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
EIF3C-205ENST00000564839 TRPM3Q9HCF6 1732 aaPredicted RBP15.87■□□□□ 0.13
EIF3C-205ENST00000564839 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
EIF3C-205ENST00000564839 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
EIF3C-205ENST00000564839 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
EIF3C-205ENST00000564839 USP21Q9UK80 565 aa15.86■□□□□ 0.13
EIF3C-205ENST00000564839 PRR36Q9H6K5 1346 aa15.86■□□□□ 0.13
EIF3C-205ENST00000564839 TNS3Q68CZ2 1445 aa15.85■□□□□ 0.13
EIF3C-205ENST00000564839 ABCA3Q99758 1704 aa15.85■□□□□ 0.13
EIF3C-205ENST00000564839 SLIT2O94813 1529 aa15.85■□□□□ 0.13
EIF3C-205ENST00000564839 POGKQ9P215 609 aa15.85■□□□□ 0.13
EIF3C-205ENST00000564839 TRPC5Q9UL62 973 aaPredicted RBP15.84■□□□□ 0.13
EIF3C-205ENST00000564839 ALS2Q96Q42 1657 aa15.83■□□□□ 0.13
EIF3C-205ENST00000564839 WASLO00401 505 aaPredicted RBP15.83■□□□□ 0.12
EIF3C-205ENST00000564839 ATP7BP35670 1465 aa15.81■□□□□ 0.12
EIF3C-205ENST00000564839 PSME1Q06323 249 aa15.81■□□□□ 0.12
EIF3C-205ENST00000564839 EIF3AQ14152 1382 aaKnown RBP15.81■□□□□ 0.12
EIF3C-205ENST00000564839 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
EIF3C-205ENST00000564839 HIRIP3Q9BW71 556 aaPredicted RBP15.81■□□□□ 0.12
EIF3C-205ENST00000564839 CRYBG1Q9Y4K1 1723 aa15.81■□□□□ 0.12
EIF3C-205ENST00000564839 GLI3P10071 1580 aa15.8■□□□□ 0.12
EIF3C-205ENST00000564839 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
EIF3C-205ENST00000564839 PMFBP1Q8TBY8 1022 aa15.8■□□□□ 0.12
EIF3C-205ENST00000564839 ARHGEF10O15013 1369 aa15.79■□□□□ 0.12
EIF3C-205ENST00000564839 NWD2Q9ULI1 1742 aa15.79■□□□□ 0.12
EIF3C-205ENST00000564839 PLCH1Q4KWH8 1693 aa15.79■□□□□ 0.12
EIF3C-205ENST00000564839 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
EIF3C-205ENST00000564839 ITSN1Q15811 1721 aa15.77■□□□□ 0.12
EIF3C-205ENST00000564839 NBPF1Q3BBV0 1214 aa15.77■□□□□ 0.12
EIF3C-205ENST00000564839 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.12
EIF3C-205ENST00000564839 CABLES1Q8TDN4 633 aa15.77■□□□□ 0.12
EIF3C-205ENST00000564839 GJD4Q96KN9 370 aaPredicted RBP15.77■□□□□ 0.12
EIF3C-205ENST00000564839 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
EIF3C-205ENST00000564839 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
EIF3C-205ENST00000564839 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
EIF3C-205ENST00000564839 EP400Q96L91 3159 aa15.74■□□□□ 0.11
EIF3C-205ENST00000564839 NUDT16Q96DE0 195 aaKnown RBP15.74■□□□□ 0.11
EIF3C-205ENST00000564839 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
EIF3C-205ENST00000564839 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
EIF3C-205ENST00000564839 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
EIF3C-205ENST00000564839 ATAD2Q6PL18 1390 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms