RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SOS2Q07890 1332 aaPredicted RBP22.11■■□□□ 1.13
SPG7-210ENST00000564409 C14orf93Q9H972 538 aaKnown RBP22.11■■□□□ 1.13
SPG7-210ENST00000564409 PNPLA6Q8IY17 1366 aa22.11■■□□□ 1.13
SPG7-210ENST00000564409 NUTM2BA6NNL0 878 aaPredicted RBP22.1■■□□□ 1.13
SPG7-210ENST00000564409 NUTM2EB1AL46 878 aaPredicted RBP22.1■■□□□ 1.13
SPG7-210ENST00000564409 NUTM2AQ8IVF1 878 aaPredicted RBP22.1■■□□□ 1.13
SPG7-210ENST00000564409 ORAI2Q96SN7 254 aa22.1■■□□□ 1.13
SPG7-210ENST00000564409 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
SPG7-210ENST00000564409 STK26Q9P289 416 aa22.1■■□□□ 1.13
SPG7-210ENST00000564409 TMEM132EQ6IEE7 984 aa22.08■■□□□ 1.13
SPG7-210ENST00000564409 DDX17Q92841 729 aaKnown RBP22.08■■□□□ 1.13
SPG7-210ENST00000564409 STAC3Q96MF2 364 aa22.08■■□□□ 1.13
SPG7-210ENST00000564409 NPHP3Q7Z494 1330 aa22.07■■□□□ 1.12
SPG7-210ENST00000564409 DHX57Q6P158 1386 aaKnown RBP22.07■■□□□ 1.12
SPG7-210ENST00000564409 WAPLQ7Z5K2 1190 aa22.06■■□□□ 1.12
SPG7-210ENST00000564409 ESCO1Q5FWF5 840 aa22.05■■□□□ 1.12
SPG7-210ENST00000564409 AFF2P51816 1311 aa22.03■■□□□ 1.12
SPG7-210ENST00000564409 FMN2Q9NZ56 1722 aa22.03■■□□□ 1.12
SPG7-210ENST00000564409 RXRBP28702 533 aa22.02■■□□□ 1.12
SPG7-210ENST00000564409 CDK12Q9NYV4 1490 aaPredicted RBP22.02■■□□□ 1.12
SPG7-210ENST00000564409 COL22A1Q8NFW1 1626 aaPredicted RBP22.02■■□□□ 1.11
SPG7-210ENST00000564409 CFAP70Q5T0N1 1121 aa22.01■■□□□ 1.11
SPG7-210ENST00000564409 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
SPG7-210ENST00000564409 KIF1AQ12756 1690 aa21.99■■□□□ 1.11
SPG7-210ENST00000564409 PXDNQ92626 1479 aa21.99■■□□□ 1.11
SPG7-210ENST00000564409 C8orf37Q96NL8 207 aa21.99■■□□□ 1.11
SPG7-210ENST00000564409 DLC1Q96QB1 1528 aa21.99■■□□□ 1.11
SPG7-210ENST00000564409 FOXO3O43524 673 aa21.97■■□□□ 1.11
SPG7-210ENST00000564409 NGLY1Q96IV0 654 aa21.97■■□□□ 1.11
SPG7-210ENST00000564409 ADAMTS2O95450 1211 aa21.94■■□□□ 1.1
SPG7-210ENST00000564409 RBM6P78332 1123 aaKnown RBP21.94■■□□□ 1.1
SPG7-210ENST00000564409 DCAF11Q8TEB1 546 aa21.94■■□□□ 1.1
SPG7-210ENST00000564409 QTRT2Q9H974 415 aaKnown RBP21.94■■□□□ 1.1
SPG7-210ENST00000564409 NUTM2FA1L443 756 aa21.93■■□□□ 1.1
SPG7-210ENST00000564409 ADGRB1O14514 1584 aa21.93■■□□□ 1.1
SPG7-210ENST00000564409 PRAM1Q96QH2 718 aa21.93■■□□□ 1.1
SPG7-210ENST00000564409 POGKQ9P215 609 aa21.93■■□□□ 1.1
SPG7-210ENST00000564409 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
SPG7-210ENST00000564409 FNBP4Q8N3X1 1017 aaPredicted RBP21.91■■□□□ 1.1
SPG7-210ENST00000564409 MARF1Q9Y4F3 1742 aaKnown RBP21.91■■□□□ 1.1
SPG7-210ENST00000564409 ADGRB2O60241 1585 aa21.91■■□□□ 1.1
SPG7-210ENST00000564409 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
SPG7-210ENST00000564409 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.1
SPG7-210ENST00000564409 PSME1Q06323 249 aa21.89■■□□□ 1.09
SPG7-210ENST00000564409 PHF8Q9UPP1 1060 aa21.89■■□□□ 1.09
SPG7-210ENST00000564409 EIF3AQ14152 1382 aaKnown RBP21.88■■□□□ 1.09
SPG7-210ENST00000564409 SPATA31A3Q5VYP0 1347 aa21.88■■□□□ 1.09
SPG7-210ENST00000564409 USP21Q9UK80 565 aa21.88■■□□□ 1.09
SPG7-210ENST00000564409 XPCQ01831 940 aaPredicted RBP21.87■■□□□ 1.09
SPG7-210ENST00000564409 KRT28Q7Z3Y7 464 aa21.87■■□□□ 1.09
SPG7-210ENST00000564409 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
SPG7-210ENST00000564409 SAFB2Q14151 953 aaKnown RBP eCLIP21.86■■□□□ 1.09
SPG7-210ENST00000564409 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
SPG7-210ENST00000564409 UPF1Q92900 1129 aaKnown RBP eCLIP21.84■■□□□ 1.09
SPG7-210ENST00000564409 SBNO1A3KN83 1393 aa21.84■■□□□ 1.09
SPG7-210ENST00000564409 KIAA1210Q9ULL0 1709 aa21.83■■□□□ 1.08
SPG7-210ENST00000564409 RGS12O14924 1447 aa21.82■■□□□ 1.08
SPG7-210ENST00000564409 TNS3Q68CZ2 1445 aa21.82■■□□□ 1.08
SPG7-210ENST00000564409 ATRNO75882 1429 aa21.81■■□□□ 1.08
SPG7-210ENST00000564409 USP32Q8NFA0 1604 aa21.81■■□□□ 1.08
SPG7-210ENST00000564409 ARHGEF10O15013 1369 aa21.81■■□□□ 1.08
SPG7-210ENST00000564409 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.8■■□□□ 1.08
SPG7-210ENST00000564409 BCL9LQ86UU0 1499 aa21.79■■□□□ 1.08
SPG7-210ENST00000564409 ARHGEF28Q8N1W1 1705 aaKnown RBP21.79■■□□□ 1.08
SPG7-210ENST00000564409 TULP4Q9NRJ4 1543 aa21.79■■□□□ 1.08
SPG7-210ENST00000564409 WASLO00401 505 aaPredicted RBP21.78■■□□□ 1.08
SPG7-210ENST00000564409 MINK1Q8N4C8 1332 aaPredicted RBP21.78■■□□□ 1.08
SPG7-210ENST00000564409 GPRASP1Q5JY77 1395 aa21.76■■□□□ 1.07
SPG7-210ENST00000564409 HIRIP3Q9BW71 556 aaPredicted RBP21.76■■□□□ 1.07
SPG7-210ENST00000564409 HAP1P54257 671 aaPredicted RBP21.75■■□□□ 1.07
SPG7-210ENST00000564409 SLIT2O94813 1529 aa21.75■■□□□ 1.07
SPG7-210ENST00000564409 ITSN1Q15811 1721 aa21.75■■□□□ 1.07
SPG7-210ENST00000564409 UNC5CLQ8IV45 518 aa21.74■■□□□ 1.07
SPG7-210ENST00000564409 PMFBP1Q8TBY8 1022 aa21.74■■□□□ 1.07
SPG7-210ENST00000564409 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
SPG7-210ENST00000564409 GJD4Q96KN9 370 aaPredicted RBP21.73■■□□□ 1.07
SPG7-210ENST00000564409 TRPM3Q9HCF6 1732 aaPredicted RBP21.72■■□□□ 1.07
SPG7-210ENST00000564409 PRR36Q9H6K5 1346 aa21.72■■□□□ 1.07
SPG7-210ENST00000564409 ABCA3Q99758 1704 aa21.72■■□□□ 1.07
SPG7-210ENST00000564409 NWD2Q9ULI1 1742 aa21.72■■□□□ 1.07
SPG7-210ENST00000564409 LMOD2Q6P5Q4 547 aa21.71■■□□□ 1.07
SPG7-210ENST00000564409 ALS2Q96Q42 1657 aa21.69■■□□□ 1.06
SPG7-210ENST00000564409 NGDNQ8NEJ9 315 aaKnown RBP21.69■■□□□ 1.06
SPG7-210ENST00000564409 ATP7BP35670 1465 aa21.67■■□□□ 1.06
SPG7-210ENST00000564409 CABLES1Q8TDN4 633 aa21.67■■□□□ 1.06
SPG7-210ENST00000564409 NUDT16Q96DE0 195 aaKnown RBP21.67■■□□□ 1.06
SPG7-210ENST00000564409 PLCH1Q4KWH8 1693 aa21.66■■□□□ 1.06
SPG7-210ENST00000564409 RALGAPBQ86X10 1494 aa21.65■■□□□ 1.06
SPG7-210ENST00000564409 VPS72Q15906 364 aa21.65■■□□□ 1.06
SPG7-210ENST00000564409 CDK19Q9BWU1 502 aa21.65■■□□□ 1.06
SPG7-210ENST00000564409 CCDC125Q86Z20 511 aa21.64■■□□□ 1.05
SPG7-210ENST00000564409 GLI3P10071 1580 aa21.63■■□□□ 1.05
SPG7-210ENST00000564409 NBPF1Q3BBV0 1214 aa21.63■■□□□ 1.05
SPG7-210ENST00000564409 CCDC61Q9Y6R9 512 aa21.63■■□□□ 1.05
SPG7-210ENST00000564409 POLR3AO14802 1390 aaPredicted RBP21.61■■□□□ 1.05
SPG7-210ENST00000564409 TOPAZ1Q8N9V7 1692 aa21.61■■□□□ 1.05
SPG7-210ENST00000564409 FAM83GA6ND36 823 aa21.61■■□□□ 1.05
SPG7-210ENST00000564409 COL14A1Q05707 1796 aaKnown RBP21.61■■□□□ 1.05
SPG7-210ENST00000564409 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
SPG7-210ENST00000564409 PAK3O75914 559 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms