RNA–Protein interactions for RNA: ENST00000564177.1

SCAPER-211, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-211ENST00000564177 PRAM1Q96QH2 718 aa26.28■■□□□ 1.8
SCAPER-211ENST00000564177 TRAK1Q9UPV9 953 aa26.28■■□□□ 1.8
SCAPER-211ENST00000564177 CLSPNQ9HAW4 1339 aa26.27■■□□□ 1.8
SCAPER-211ENST00000564177 NBPF1Q3BBV0 1214 aa26.25■■□□□ 1.79
SCAPER-211ENST00000564177 TRPM1Q7Z4N2 1603 aa26.23■■□□□ 1.79
SCAPER-211ENST00000564177 C1orf167Q5SNV9 1468 aa26.23■■□□□ 1.79
SCAPER-211ENST00000564177 BRINP3Q76B58 766 aa26.22■■□□□ 1.79
SCAPER-211ENST00000564177 POGKQ9P215 609 aa26.22■■□□□ 1.79
SCAPER-211ENST00000564177 ARHGEF28Q8N1W1 1705 aaKnown RBP26.22■■□□□ 1.79
SCAPER-211ENST00000564177 SAFB2Q14151 953 aaKnown RBP eCLIP26.2■■□□□ 1.78
SCAPER-211ENST00000564177 NBPF8Q3BBV2 869 aa26.19■■□□□ 1.78
SCAPER-211ENST00000564177 ADGRB2O60241 1585 aa26.18■■□□□ 1.78
SCAPER-211ENST00000564177 AHDC1Q5TGY3 1603 aaPredicted RBP26.17■■□□□ 1.78
SCAPER-211ENST00000564177 FMN2Q9NZ56 1722 aa26.16■■□□□ 1.78
SCAPER-211ENST00000564177 ROCK2O75116 1388 aaKnown RBP26.15■■□□□ 1.78
SCAPER-211ENST00000564177 PHLPP1O60346 1717 aa26.14■■□□□ 1.78
SCAPER-211ENST00000564177 CCER1Q8TC90 406 aaPredicted RBP26.14■■□□□ 1.78
SCAPER-211ENST00000564177 GPRASP1Q5JY77 1395 aa26.13■■□□□ 1.77
SCAPER-211ENST00000564177 COL16A1Q07092 1604 aaPredicted RBP26.13■■□□□ 1.77
SCAPER-211ENST00000564177 ORAI2Q96SN7 254 aa26.12■■□□□ 1.77
SCAPER-211ENST00000564177 NHSL1Q5SYE7 1610 aa26.12■■□□□ 1.77
SCAPER-211ENST00000564177 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
SCAPER-211ENST00000564177 TIMELESSQ9UNS1 1208 aa26.11■■□□□ 1.77
SCAPER-211ENST00000564177 MINK1Q8N4C8 1332 aaPredicted RBP26.11■■□□□ 1.77
SCAPER-211ENST00000564177 HIRIP3Q9BW71 556 aaPredicted RBP26.1■■□□□ 1.77
SCAPER-211ENST00000564177 NUTM2FA1L443 756 aa26.09■■□□□ 1.77
SCAPER-211ENST00000564177 ESCO1Q5FWF5 840 aa26.07■■□□□ 1.76
SCAPER-211ENST00000564177 CENPJQ9HC77 1338 aaPredicted RBP26.07■■□□□ 1.76
SCAPER-211ENST00000564177 ANKARQ7Z5J8 1434 aa26.06■■□□□ 1.76
SCAPER-211ENST00000564177 WASLO00401 505 aaPredicted RBP26.05■■□□□ 1.76
SCAPER-211ENST00000564177 EIF3AQ14152 1382 aaKnown RBP26.05■■□□□ 1.76
SCAPER-211ENST00000564177 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
SCAPER-211ENST00000564177 TULP4Q9NRJ4 1543 aa26.04■■□□□ 1.76
SCAPER-211ENST00000564177 USP32Q8NFA0 1604 aa26.03■■□□□ 1.76
SCAPER-211ENST00000564177 JCADQ9P266 1359 aa26.03■■□□□ 1.76
SCAPER-211ENST00000564177 CARD11Q9BXL7 1154 aa26.02■■□□□ 1.76
SCAPER-211ENST00000564177 KIF1AQ12756 1690 aa26.01■■□□□ 1.75
SCAPER-211ENST00000564177 QRICH2Q9H0J4 1663 aa26.01■■□□□ 1.75
SCAPER-211ENST00000564177 SOS2Q07890 1332 aaPredicted RBP26■■□□□ 1.75
SCAPER-211ENST00000564177 NPHP3Q7Z494 1330 aa26■■□□□ 1.75
SCAPER-211ENST00000564177 PRR36Q9H6K5 1346 aa25.99■■□□□ 1.75
SCAPER-211ENST00000564177 MED1Q15648 1581 aaPredicted RBP25.99■■□□□ 1.75
SCAPER-211ENST00000564177 RGPD8O14715 1765 aaPredicted RBP25.98■■□□□ 1.75
SCAPER-211ENST00000564177 FOXO3O43524 673 aa25.97■■□□□ 1.75
SCAPER-211ENST00000564177 LRRC59Q96AG4 307 aaKnown RBP25.97■■□□□ 1.75
SCAPER-211ENST00000564177 CDK19Q9BWU1 502 aa25.97■■□□□ 1.75
SCAPER-211ENST00000564177 PHF8Q9UPP1 1060 aa25.97■■□□□ 1.75
SCAPER-211ENST00000564177 ATP7BP35670 1465 aa25.97■■□□□ 1.75
SCAPER-211ENST00000564177 PXDNQ92626 1479 aa25.97■■□□□ 1.75
SCAPER-211ENST00000564177 SHPRHQ149N8 1683 aa25.96■■□□□ 1.75
SCAPER-211ENST00000564177 NUDT16Q96DE0 195 aaKnown RBP25.92■■□□□ 1.74
SCAPER-211ENST00000564177 SBNO2Q9Y2G9 1366 aa25.92■■□□□ 1.74
SCAPER-211ENST00000564177 SPATA31A6Q5VVP1 1343 aa25.91■■□□□ 1.74
SCAPER-211ENST00000564177 PNPLA6Q8IY17 1366 aa25.91■■□□□ 1.74
SCAPER-211ENST00000564177 XPCQ01831 940 aaPredicted RBP25.9■■□□□ 1.74
SCAPER-211ENST00000564177 PMFBP1Q8TBY8 1022 aa25.9■■□□□ 1.74
SCAPER-211ENST00000564177 ITSN1Q15811 1721 aa25.9■■□□□ 1.74
SCAPER-211ENST00000564177 TOPAZ1Q8N9V7 1692 aa25.89■■□□□ 1.73
SCAPER-211ENST00000564177 DISP3Q9P2K9 1392 aa25.88■■□□□ 1.73
SCAPER-211ENST00000564177 SRPK2P78362 688 aaKnown RBP25.88■■□□□ 1.73
SCAPER-211ENST00000564177 EVC2Q86UK5 1308 aa25.88■■□□□ 1.73
SCAPER-211ENST00000564177 KRT28Q7Z3Y7 464 aa25.87■■□□□ 1.73
SCAPER-211ENST00000564177 CCDC61Q9Y6R9 512 aa25.87■■□□□ 1.73
SCAPER-211ENST00000564177 LRP6O75581 1613 aa25.85■■□□□ 1.73
SCAPER-211ENST00000564177 CABP2Q9NPB3 220 aa25.85■■□□□ 1.73
SCAPER-211ENST00000564177 PSME1Q06323 249 aa25.84■■□□□ 1.73
SCAPER-211ENST00000564177 COL22A1Q8NFW1 1626 aaPredicted RBP25.83■■□□□ 1.73
SCAPER-211ENST00000564177 SPATA31A3Q5VYP0 1347 aa25.83■■□□□ 1.73
SCAPER-211ENST00000564177 PLEKHG3A1L390 1219 aa25.82■■□□□ 1.72
SCAPER-211ENST00000564177 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
SCAPER-211ENST00000564177 POLR3AO14802 1390 aaPredicted RBP25.82■■□□□ 1.72
SCAPER-211ENST00000564177 USP47Q96K76 1375 aa25.82■■□□□ 1.72
SCAPER-211ENST00000564177 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
SCAPER-211ENST00000564177 TNS3Q68CZ2 1445 aa25.8■■□□□ 1.72
SCAPER-211ENST00000564177 PPIP5K1Q6PFW1 1433 aa25.8■■□□□ 1.72
SCAPER-211ENST00000564177 ST20-MTHFSA0A0A6YYL1 179 aa25.8■■□□□ 1.72
SCAPER-211ENST00000564177 TRPM3Q9HCF6 1732 aaPredicted RBP25.78■■□□□ 1.72
SCAPER-211ENST00000564177 TESK2Q96S53 571 aa25.78■■□□□ 1.72
SCAPER-211ENST00000564177 NUTM2BA6NNL0 878 aaPredicted RBP25.77■■□□□ 1.72
SCAPER-211ENST00000564177 NUTM2EB1AL46 878 aaPredicted RBP25.77■■□□□ 1.72
SCAPER-211ENST00000564177 NUTM2AQ8IVF1 878 aaPredicted RBP25.77■■□□□ 1.72
SCAPER-211ENST00000564177 PHF23Q9BUL5 403 aaPredicted RBP25.77■■□□□ 1.72
SCAPER-211ENST00000564177 ACEP12821 1306 aa25.77■■□□□ 1.72
SCAPER-211ENST00000564177 ATAD2Q6PL18 1390 aa25.76■■□□□ 1.71
SCAPER-211ENST00000564177 ARHGEF10O15013 1369 aa25.74■■□□□ 1.71
SCAPER-211ENST00000564177 SLC24A1O60721 1099 aa25.74■■□□□ 1.71
SCAPER-211ENST00000564177 CABP1Q9NZU7 370 aa25.74■■□□□ 1.71
SCAPER-211ENST00000564177 MEX3CQ5U5Q3 659 aaKnown RBP25.73■■□□□ 1.71
SCAPER-211ENST00000564177 ALS2Q96Q42 1657 aa25.72■■□□□ 1.71
SCAPER-211ENST00000564177 RGS17Q9UGC6 210 aaPredicted RBP25.71■■□□□ 1.71
SCAPER-211ENST00000564177 PUS7Q96PZ0 661 aaKnown RBP25.7■■□□□ 1.7
SCAPER-211ENST00000564177 LMOD2Q6P5Q4 547 aa25.68■■□□□ 1.7
SCAPER-211ENST00000564177 PAK3O75914 559 aaPredicted RBP25.67■■□□□ 1.7
SCAPER-211ENST00000564177 USP6P35125 1406 aa25.66■■□□□ 1.7
SCAPER-211ENST00000564177 ADAMTS2O95450 1211 aa25.66■■□□□ 1.7
SCAPER-211ENST00000564177 BRD4O60885 1362 aaPredicted RBP25.66■■□□□ 1.7
SCAPER-211ENST00000564177 TMF1P82094 1093 aa25.64■■□□□ 1.7
SCAPER-211ENST00000564177 C8orf37Q96NL8 207 aa25.64■■□□□ 1.7
SCAPER-211ENST00000564177 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
SCAPER-211ENST00000564177 ABCA3Q99758 1704 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms