RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.17
UBFD1-203ENST00000564106 NRXN1Q9ULB1 1477 aa13.96□□□□□ -0.17
UBFD1-203ENST00000564106 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.18
UBFD1-203ENST00000564106 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.18
UBFD1-203ENST00000564106 NEUROD1Q13562 356 aa13.95□□□□□ -0.18
UBFD1-203ENST00000564106 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
UBFD1-203ENST00000564106 TECPR2O15040 1411 aa13.95□□□□□ -0.18
UBFD1-203ENST00000564106 NUTM2BA6NNL0 878 aaPredicted RBP13.94□□□□□ -0.18
UBFD1-203ENST00000564106 NUTM2EB1AL46 878 aaPredicted RBP13.94□□□□□ -0.18
UBFD1-203ENST00000564106 NUTM2AQ8IVF1 878 aaPredicted RBP13.94□□□□□ -0.18
UBFD1-203ENST00000564106 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
UBFD1-203ENST00000564106 STK26Q9P289 416 aa13.94□□□□□ -0.18
UBFD1-203ENST00000564106 SPATA31A6Q5VVP1 1343 aa13.93□□□□□ -0.18
UBFD1-203ENST00000564106 LRPPRCP42704 1394 aaKnown RBP13.93□□□□□ -0.18
UBFD1-203ENST00000564106 FMN2Q9NZ56 1722 aa13.93□□□□□ -0.18
UBFD1-203ENST00000564106 RGPD8O14715 1765 aaPredicted RBP13.92□□□□□ -0.18
UBFD1-203ENST00000564106 MYOM2P54296 1465 aa13.92□□□□□ -0.18
UBFD1-203ENST00000564106 YTHDC2Q9H6S0 1430 aaKnown RBP13.91□□□□□ -0.18
UBFD1-203ENST00000564106 PXDNQ92626 1479 aa13.91□□□□□ -0.18
UBFD1-203ENST00000564106 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
UBFD1-203ENST00000564106 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
UBFD1-203ENST00000564106 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
UBFD1-203ENST00000564106 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.19
UBFD1-203ENST00000564106 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
UBFD1-203ENST00000564106 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
UBFD1-203ENST00000564106 XPCQ01831 940 aaPredicted RBP13.89□□□□□ -0.19
UBFD1-203ENST00000564106 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
UBFD1-203ENST00000564106 USP32Q8NFA0 1604 aa13.88□□□□□ -0.19
UBFD1-203ENST00000564106 AFF2P51816 1311 aa13.88□□□□□ -0.19
UBFD1-203ENST00000564106 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
UBFD1-203ENST00000564106 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
UBFD1-203ENST00000564106 LRRC59Q96AG4 307 aaKnown RBP13.85□□□□□ -0.19
UBFD1-203ENST00000564106 RGS12O14924 1447 aa13.84□□□□□ -0.19
UBFD1-203ENST00000564106 ADAMTS2O95450 1211 aa13.84□□□□□ -0.19
UBFD1-203ENST00000564106 ESCO1Q5FWF5 840 aa13.84□□□□□ -0.19
UBFD1-203ENST00000564106 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
UBFD1-203ENST00000564106 FOXO3O43524 673 aa13.83□□□□□ -0.2
UBFD1-203ENST00000564106 SAFB2Q14151 953 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBFD1-203ENST00000564106 MARF1Q9Y4F3 1742 aaKnown RBP13.83□□□□□ -0.2
UBFD1-203ENST00000564106 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
UBFD1-203ENST00000564106 ZNF772Q68DY9 489 aaPredicted RBP13.81□□□□□ -0.2
UBFD1-203ENST00000564106 KIF1AQ12756 1690 aa13.81□□□□□ -0.2
UBFD1-203ENST00000564106 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
UBFD1-203ENST00000564106 ADGRB2O60241 1585 aa13.8□□□□□ -0.2
UBFD1-203ENST00000564106 PRAM1Q96QH2 718 aa13.8□□□□□ -0.2
UBFD1-203ENST00000564106 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
UBFD1-203ENST00000564106 ARHGEF28Q8N1W1 1705 aaKnown RBP13.8□□□□□ -0.2
UBFD1-203ENST00000564106 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
UBFD1-203ENST00000564106 NPHP3Q7Z494 1330 aa13.78□□□□□ -0.2
UBFD1-203ENST00000564106 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
UBFD1-203ENST00000564106 BCL9LQ86UU0 1499 aa13.78□□□□□ -0.2
UBFD1-203ENST00000564106 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
UBFD1-203ENST00000564106 RXRBP28702 533 aa13.77□□□□□ -0.21
UBFD1-203ENST00000564106 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
UBFD1-203ENST00000564106 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBFD1-203ENST00000564106 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
UBFD1-203ENST00000564106 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
UBFD1-203ENST00000564106 CDK12Q9NYV4 1490 aaPredicted RBP13.77□□□□□ -0.21
UBFD1-203ENST00000564106 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.21
UBFD1-203ENST00000564106 ATRNO75882 1429 aa13.76□□□□□ -0.21
UBFD1-203ENST00000564106 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
UBFD1-203ENST00000564106 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
UBFD1-203ENST00000564106 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
UBFD1-203ENST00000564106 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
UBFD1-203ENST00000564106 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
UBFD1-203ENST00000564106 GLI3P10071 1580 aa13.74□□□□□ -0.21
UBFD1-203ENST00000564106 CRYBG1Q9Y4K1 1723 aa13.73□□□□□ -0.21
UBFD1-203ENST00000564106 ALS2Q96Q42 1657 aa13.73□□□□□ -0.21
UBFD1-203ENST00000564106 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
UBFD1-203ENST00000564106 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
UBFD1-203ENST00000564106 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
UBFD1-203ENST00000564106 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
UBFD1-203ENST00000564106 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
UBFD1-203ENST00000564106 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 USP21Q9UK80 565 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 SLIT2O94813 1529 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 TULP4Q9NRJ4 1543 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 RALGAPBQ86X10 1494 aa13.72□□□□□ -0.21
UBFD1-203ENST00000564106 RBM6P78332 1123 aaKnown RBP13.71□□□□□ -0.21
UBFD1-203ENST00000564106 DIEXFQ68CQ4 756 aaKnown RBP13.71□□□□□ -0.21
UBFD1-203ENST00000564106 EP400Q96L91 3159 aa13.71□□□□□ -0.21
UBFD1-203ENST00000564106 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
UBFD1-203ENST00000564106 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
UBFD1-203ENST00000564106 ATP7BP35670 1465 aa13.7□□□□□ -0.22
UBFD1-203ENST00000564106 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
UBFD1-203ENST00000564106 POGKQ9P215 609 aa13.7□□□□□ -0.22
UBFD1-203ENST00000564106 TRPM1Q7Z4N2 1603 aa13.7□□□□□ -0.22
UBFD1-203ENST00000564106 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
UBFD1-203ENST00000564106 BRWD3Q6RI45 1802 aa13.69□□□□□ -0.22
UBFD1-203ENST00000564106 NRAPQ86VF7 1730 aa13.69□□□□□ -0.22
UBFD1-203ENST00000564106 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBFD1-203ENST00000564106 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
UBFD1-203ENST00000564106 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
UBFD1-203ENST00000564106 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
UBFD1-203ENST00000564106 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
UBFD1-203ENST00000564106 NWD2Q9ULI1 1742 aa13.64□□□□□ -0.23
UBFD1-203ENST00000564106 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms