RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 C9orf84Q5VXU9 1444 aa15.37■□□□□ 0.05
SCAMP2-204ENST00000563829 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
SCAMP2-204ENST00000563829 A2MP01023 1474 aa15.37■□□□□ 0.05
SCAMP2-204ENST00000563829 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
SCAMP2-204ENST00000563829 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 DMTNQ08495 405 aa15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 HS1BP3Q53T59 392 aa15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 JARID2Q92833 1246 aaPredicted RBP15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 ZKSCAN5Q9Y2L8 839 aa15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 CSPP1Q1MSJ5 1256 aa15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 ZSCAN23Q3MJ62 389 aa15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 CCDC94Q9BW85 323 aaPredicted RBP15.36■□□□□ 0.05
SCAMP2-204ENST00000563829 HNRNPMP52272 730 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 SASS6Q6UVJ0 657 aa15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 GAS2L2Q8NHY3 880 aa15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 K7ELQ4 463 aaPredicted RBP15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 PRIM1P49642 420 aaKnown RBP15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 TROQ12816 1431 aaPredicted RBP15.35■□□□□ 0.05
SCAMP2-204ENST00000563829 ZSCAN20P17040 1043 aaPredicted RBP15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 TSC1Q92574 1164 aa15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 LNPKQ9C0E8 428 aa15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 FAM135AQ9P2D6 1515 aa15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 CBX1P83916 185 aa15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 DNTTIP2Q5QJE6 756 aaKnown RBP15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 ITPRIPQ8IWB1 547 aa15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 BBXQ8WY36 941 aaPredicted RBP15.34■□□□□ 0.05
SCAMP2-204ENST00000563829 PDE4CQ08493 712 aa15.33■□□□□ 0.04
SCAMP2-204ENST00000563829 NGEFQ8N5V2 710 aa15.33■□□□□ 0.04
SCAMP2-204ENST00000563829 ZKSCAN2Q63HK3 967 aa15.33■□□□□ 0.04
SCAMP2-204ENST00000563829 TCP11L2Q8N4U5 519 aa15.33■□□□□ 0.04
SCAMP2-204ENST00000563829 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.04
SCAMP2-204ENST00000563829 CROCC2H7BZ55 1655 aa15.33■□□□□ 0.04
SCAMP2-204ENST00000563829 ZNF445P59923 1031 aa15.32■□□□□ 0.04
SCAMP2-204ENST00000563829 KIF2CQ99661 725 aa15.32■□□□□ 0.04
SCAMP2-204ENST00000563829 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
SCAMP2-204ENST00000563829 PDLIM2Q96JY6 352 aa15.32■□□□□ 0.04
SCAMP2-204ENST00000563829 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
SCAMP2-204ENST00000563829 UTP14CQ5TAP6 766 aaKnown RBP15.32■□□□□ 0.04
SCAMP2-204ENST00000563829 RBM27Q9P2N5 1060 aaKnown RBP15.32■□□□□ 0.04
SCAMP2-204ENST00000563829 AK9Q5TCS8 1911 aa15.31■□□□□ 0.04
SCAMP2-204ENST00000563829 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
SCAMP2-204ENST00000563829 PTMAP06454 111 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-204ENST00000563829 RNF214Q8ND24 703 aa15.3■□□□□ 0.04
SCAMP2-204ENST00000563829 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
SCAMP2-204ENST00000563829 PLXNC1O60486 1568 aa15.3■□□□□ 0.04
SCAMP2-204ENST00000563829 MPNDQ8N594 471 aa15.3■□□□□ 0.04
SCAMP2-204ENST00000563829 PTPRGP23470 1445 aa15.3■□□□□ 0.04
SCAMP2-204ENST00000563829 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 FAM177BA6PVY3 158 aa15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 PRPF40AO75400 957 aaKnown RBP15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 PPP4R3BQ5MIZ7 849 aa15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 RUNDC1Q96C34 613 aa15.28■□□□□ 0.04
SCAMP2-204ENST00000563829 ADCY10Q96PN6 1610 aa15.27■□□□□ 0.04
SCAMP2-204ENST00000563829 PKP1Q13835 747 aa15.27■□□□□ 0.04
SCAMP2-204ENST00000563829 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.04
SCAMP2-204ENST00000563829 PLA2R1Q13018 1463 aa15.27■□□□□ 0.04
SCAMP2-204ENST00000563829 ABCC10Q5T3U5 1492 aa15.27■□□□□ 0.04
SCAMP2-204ENST00000563829 TRIM27P14373 513 aa15.27■□□□□ 0.03
SCAMP2-204ENST00000563829 SYCE3A1L190 88 aa15.26■□□□□ 0.03
SCAMP2-204ENST00000563829 MCM5P33992 734 aa15.26■□□□□ 0.03
SCAMP2-204ENST00000563829 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
SCAMP2-204ENST00000563829 RAPGEF6Q8TEU7 1601 aa15.26■□□□□ 0.03
SCAMP2-204ENST00000563829 CHAMP1Q96JM3 812 aa15.25■□□□□ 0.03
SCAMP2-204ENST00000563829 DDX19BQ9UMR2 479 aa15.25■□□□□ 0.03
SCAMP2-204ENST00000563829 LAMC1P11047 1609 aa15.25■□□□□ 0.03
SCAMP2-204ENST00000563829 CLEC17AQ6ZS10 378 aa15.25■□□□□ 0.03
SCAMP2-204ENST00000563829 WDR63Q8IWG1 891 aa15.25■□□□□ 0.03
SCAMP2-204ENST00000563829 IGSF3O75054 1194 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 KIAA2012Q0VF49 1180 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 CARD14Q9BXL6 1004 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 MYRIPQ8NFW9 859 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 GTF2E1P29083 439 aaPredicted RBP15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 NUCB1Q02818 461 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 GPT2Q8TD30 523 aa15.24■□□□□ 0.03
SCAMP2-204ENST00000563829 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 TBC1D9Q6ZT07 1266 aa15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 ZNF710Q8N1W2 664 aa15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 CCDC141Q6ZP82 1450 aa15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 ATP2B3Q16720 1220 aa15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 ANKRD45Q5TZF3 282 aa15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 NPC1L1Q9UHC9 1359 aa15.23■□□□□ 0.03
SCAMP2-204ENST00000563829 TMEM57Q8N5G2 664 aa15.22■□□□□ 0.03
SCAMP2-204ENST00000563829 EIF2AK4Q9P2K8 1649 aaKnown RBP15.22■□□□□ 0.03
SCAMP2-204ENST00000563829 SYNMO15061 1565 aa15.22■□□□□ 0.03
SCAMP2-204ENST00000563829 NUCB2P80303 420 aa15.22■□□□□ 0.03
SCAMP2-204ENST00000563829 TMEM63CQ9P1W3 806 aa15.22■□□□□ 0.03
SCAMP2-204ENST00000563829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.22■□□□□ 0.039e-8■■■□□ 16.3
SCAMP2-204ENST00000563829 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
SCAMP2-204ENST00000563829 ZNF830Q96NB3 372 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms