RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 SOS2Q07890 1332 aaPredicted RBP37.07■■■■□ 3.52
SPG7-208ENST00000563783 PNPLA6Q8IY17 1366 aa37.05■■■■□ 3.52
SPG7-208ENST00000563783 MEX3CQ5U5Q3 659 aaKnown RBP37.05■■■■□ 3.52
SPG7-208ENST00000563783 ZNF772Q68DY9 489 aaPredicted RBP37.05■■■■□ 3.52
SPG7-208ENST00000563783 STAC3Q96MF2 364 aa37.04■■■■□ 3.52
SPG7-208ENST00000563783 TMEM132EQ6IEE7 984 aa37.02■■■■□ 3.52
SPG7-208ENST00000563783 ORAI2Q96SN7 254 aa37.02■■■■□ 3.52
SPG7-208ENST00000563783 STK26Q9P289 416 aa37.02■■■■□ 3.52
SPG7-208ENST00000563783 DHX57Q6P158 1386 aaKnown RBP37.02■■■■□ 3.52
SPG7-208ENST00000563783 FMN2Q9NZ56 1722 aa37.02■■■■□ 3.52
SPG7-208ENST00000563783 DLC1Q96QB1 1528 aa36.99■■■■□ 3.51
SPG7-208ENST00000563783 WAPLQ7Z5K2 1190 aa36.98■■■■□ 3.51
SPG7-208ENST00000563783 DDX17Q92841 729 aaKnown RBP36.98■■■■□ 3.51
SPG7-208ENST00000563783 COL22A1Q8NFW1 1626 aaPredicted RBP36.97■■■■□ 3.51
SPG7-208ENST00000563783 NPHP3Q7Z494 1330 aa36.97■■■■□ 3.51
SPG7-208ENST00000563783 PLEKHH1Q9ULM0 1364 aa36.95■■■■□ 3.51
SPG7-208ENST00000563783 KIF1AQ12756 1690 aa36.95■■■■□ 3.51
SPG7-208ENST00000563783 CFAP70Q5T0N1 1121 aa36.94■■■■□ 3.5
SPG7-208ENST00000563783 ADGRB1O14514 1584 aa36.93■■■■□ 3.5
SPG7-208ENST00000563783 NUTM2BA6NNL0 878 aaPredicted RBP36.92■■■■□ 3.5
SPG7-208ENST00000563783 NUTM2EB1AL46 878 aaPredicted RBP36.92■■■■□ 3.5
SPG7-208ENST00000563783 NUTM2AQ8IVF1 878 aaPredicted RBP36.92■■■■□ 3.5
SPG7-208ENST00000563783 PXDNQ92626 1479 aa36.91■■■■□ 3.5
SPG7-208ENST00000563783 ESCO1Q5FWF5 840 aa36.91■■■■□ 3.5
SPG7-208ENST00000563783 CDK12Q9NYV4 1490 aaPredicted RBP36.88■■■■□ 3.49
SPG7-208ENST00000563783 ADGRB2O60241 1585 aa36.87■■■■□ 3.49
SPG7-208ENST00000563783 AFF2P51816 1311 aa36.85■■■■□ 3.49
SPG7-208ENST00000563783 DCAF11Q8TEB1 546 aa36.81■■■■□ 3.48
SPG7-208ENST00000563783 RGPD8O14715 1765 aaPredicted RBP36.81■■■■□ 3.48
SPG7-208ENST00000563783 FOXO3O43524 673 aa36.78■■■■□ 3.48
SPG7-208ENST00000563783 PRAM1Q96QH2 718 aa36.78■■■■□ 3.48
SPG7-208ENST00000563783 MARF1Q9Y4F3 1742 aaKnown RBP36.78■■■■□ 3.48
SPG7-208ENST00000563783 RXRBP28702 533 aa36.77■■■■□ 3.48
SPG7-208ENST00000563783 ANKARQ7Z5J8 1434 aa36.76■■■■□ 3.48
SPG7-208ENST00000563783 C8orf37Q96NL8 207 aa36.76■■■■□ 3.48
SPG7-208ENST00000563783 KIAA1210Q9ULL0 1709 aa36.74■■■■□ 3.47
SPG7-208ENST00000563783 POGKQ9P215 609 aa36.73■■■■□ 3.47
SPG7-208ENST00000563783 NUTM2FA1L443 756 aa36.72■■■■□ 3.47
SPG7-208ENST00000563783 KDM2AQ9Y2K7 1162 aa36.72■■■■□ 3.47
SPG7-208ENST00000563783 EIF3AQ14152 1382 aaKnown RBP36.71■■■■□ 3.47
SPG7-208ENST00000563783 NGLY1Q96IV0 654 aa36.7■■■■□ 3.47
SPG7-208ENST00000563783 USP32Q8NFA0 1604 aa36.69■■■■□ 3.46
SPG7-208ENST00000563783 ADAMTS2O95450 1211 aa36.68■■■■□ 3.46
SPG7-208ENST00000563783 ARHGEF28Q8N1W1 1705 aaKnown RBP36.68■■■■□ 3.46
SPG7-208ENST00000563783 SPATA31A3Q5VYP0 1347 aa36.67■■■■□ 3.46
SPG7-208ENST00000563783 FNBP4Q8N3X1 1017 aaPredicted RBP36.67■■■■□ 3.46
SPG7-208ENST00000563783 PHF8Q9UPP1 1060 aa36.67■■■■□ 3.46
SPG7-208ENST00000563783 RBM6P78332 1123 aaKnown RBP36.66■■■■□ 3.46
SPG7-208ENST00000563783 QTRT2Q9H974 415 aaKnown RBP36.65■■■■□ 3.46
SPG7-208ENST00000563783 TRAK1Q9UPV9 953 aa36.64■■■■□ 3.46
SPG7-208ENST00000563783 XPCQ01831 940 aaPredicted RBP36.63■■■■□ 3.45
SPG7-208ENST00000563783 SAFB2Q14151 953 aaKnown RBP eCLIP36.63■■■■□ 3.45
SPG7-208ENST00000563783 SBNO1A3KN83 1393 aa36.63■■■■□ 3.45
SPG7-208ENST00000563783 PSME1Q06323 249 aa36.62■■■■□ 3.45
SPG7-208ENST00000563783 TNS3Q68CZ2 1445 aa36.61■■■■□ 3.45
SPG7-208ENST00000563783 TULP4Q9NRJ4 1543 aa36.61■■■■□ 3.45
SPG7-208ENST00000563783 KRT28Q7Z3Y7 464 aa36.61■■■■□ 3.45
SPG7-208ENST00000563783 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.59■■■■□ 3.45
SPG7-208ENST00000563783 USP21Q9UK80 565 aa36.58■■■■□ 3.45
SPG7-208ENST00000563783 TRPC5Q9UL62 973 aaPredicted RBP36.57■■■■□ 3.44
SPG7-208ENST00000563783 RGS12O14924 1447 aa36.56■■■■□ 3.44
SPG7-208ENST00000563783 ATRNO75882 1429 aa36.56■■■■□ 3.44
SPG7-208ENST00000563783 ITSN1Q15811 1721 aa36.56■■■■□ 3.44
SPG7-208ENST00000563783 ARHGEF10O15013 1369 aa36.55■■■■□ 3.44
SPG7-208ENST00000563783 WASLO00401 505 aaPredicted RBP36.53■■■■□ 3.44
SPG7-208ENST00000563783 TRPM3Q9HCF6 1732 aaPredicted RBP36.53■■■■□ 3.44
SPG7-208ENST00000563783 BCL9LQ86UU0 1499 aa36.52■■■■□ 3.44
SPG7-208ENST00000563783 MINK1Q8N4C8 1332 aaPredicted RBP36.52■■■■□ 3.44
SPG7-208ENST00000563783 ABCA3Q99758 1704 aa36.51■■■■□ 3.44
SPG7-208ENST00000563783 UPF1Q92900 1129 aaKnown RBP eCLIP36.49■■■■□ 3.43
SPG7-208ENST00000563783 HIRIP3Q9BW71 556 aaPredicted RBP36.49■■■■□ 3.43
SPG7-208ENST00000563783 SLIT2O94813 1529 aa36.48■■■■□ 3.43
SPG7-208ENST00000563783 PRR36Q9H6K5 1346 aa36.47■■■■□ 3.43
SPG7-208ENST00000563783 ALS2Q96Q42 1657 aa36.47■■■■□ 3.43
SPG7-208ENST00000563783 NWD2Q9ULI1 1742 aa36.45■■■■□ 3.43
SPG7-208ENST00000563783 ATP7BP35670 1465 aa36.44■■■■□ 3.42
SPG7-208ENST00000563783 GPRASP1Q5JY77 1395 aa36.44■■■■□ 3.42
SPG7-208ENST00000563783 PMFBP1Q8TBY8 1022 aa36.42■■■■□ 3.42
SPG7-208ENST00000563783 TOPAZ1Q8N9V7 1692 aa36.39■■■■□ 3.42
SPG7-208ENST00000563783 UNC5CLQ8IV45 518 aa36.37■■■■□ 3.41
SPG7-208ENST00000563783 PLCH1Q4KWH8 1693 aa36.37■■■■□ 3.41
SPG7-208ENST00000563783 HAP1P54257 671 aaPredicted RBP36.35■■■■□ 3.41
SPG7-208ENST00000563783 GJD4Q96KN9 370 aaPredicted RBP36.34■■■■□ 3.41
SPG7-208ENST00000563783 ATAD2Q6PL18 1390 aa36.33■■■■□ 3.41
SPG7-208ENST00000563783 NBPF1Q3BBV0 1214 aa36.33■■■■□ 3.41
SPG7-208ENST00000563783 NUDT16Q96DE0 195 aaKnown RBP36.33■■■■□ 3.41
SPG7-208ENST00000563783 CRYBG1Q9Y4K1 1723 aa36.33■■■■□ 3.41
SPG7-208ENST00000563783 NGDNQ8NEJ9 315 aaKnown RBP36.32■■■■□ 3.4
SPG7-208ENST00000563783 LMOD2Q6P5Q4 547 aa36.3■■■■□ 3.4
SPG7-208ENST00000563783 L3MBTL2Q969R5 705 aa36.3■■■■□ 3.4
SPG7-208ENST00000563783 CDK19Q9BWU1 502 aa36.3■■■■□ 3.4
SPG7-208ENST00000563783 TRPM1Q7Z4N2 1603 aa36.3■■■■□ 3.4
SPG7-208ENST00000563783 POLR3AO14802 1390 aaPredicted RBP36.29■■■■□ 3.4
SPG7-208ENST00000563783 GLI3P10071 1580 aa36.29■■■■□ 3.4
SPG7-208ENST00000563783 CABLES1Q8TDN4 633 aa36.29■■■■□ 3.4
SPG7-208ENST00000563783 RALGAPBQ86X10 1494 aa36.28■■■■□ 3.4
SPG7-208ENST00000563783 CCDC61Q9Y6R9 512 aa36.27■■■■□ 3.4
SPG7-208ENST00000563783 QRICH2Q9H0J4 1663 aa36.26■■■■□ 3.4
SPG7-208ENST00000563783 COL14A1Q05707 1796 aaKnown RBP36.26■■■■□ 3.4
SPG7-208ENST00000563783 CENPJQ9HC77 1338 aaPredicted RBP36.26■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms