RNA–Protein interactions for RNA: ENST00000563753.1

NPTN-206, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-206ENST00000563753 NPHP3Q7Z494 1330 aa23.03■■□□□ 1.28
NPTN-206ENST00000563753 KIF1BO60333 1816 aa23.02■■□□□ 1.28
NPTN-206ENST00000563753 ATRNO75882 1429 aa22.99■■□□□ 1.27
NPTN-206ENST00000563753 FOXO3O43524 673 aa22.99■■□□□ 1.27
NPTN-206ENST00000563753 XPCQ01831 940 aaPredicted RBP22.97■■□□□ 1.27
NPTN-206ENST00000563753 STK26Q9P289 416 aa22.97■■□□□ 1.27
NPTN-206ENST00000563753 MYOM2P54296 1465 aa22.97■■□□□ 1.27
NPTN-206ENST00000563753 FOXD1Q16676 465 aa22.96■■□□□ 1.27
NPTN-206ENST00000563753 LRPPRCP42704 1394 aaKnown RBP22.95■■□□□ 1.26
NPTN-206ENST00000563753 WAPLQ7Z5K2 1190 aa22.95■■□□□ 1.26
NPTN-206ENST00000563753 ADGRF5Q8IZF2 1346 aa22.95■■□□□ 1.26
NPTN-206ENST00000563753 NUTM2FA1L443 756 aa22.94■■□□□ 1.26
NPTN-206ENST00000563753 COL22A1Q8NFW1 1626 aaPredicted RBP22.93■■□□□ 1.26
NPTN-206ENST00000563753 BCL9LQ86UU0 1499 aa22.93■■□□□ 1.26
NPTN-206ENST00000563753 PXDNQ92626 1479 aa22.93■■□□□ 1.26
NPTN-206ENST00000563753 RGL3Q3MIN7 710 aa22.93■■□□□ 1.26
NPTN-206ENST00000563753 ZRANB1Q9UGI0 708 aa22.93■■□□□ 1.26
NPTN-206ENST00000563753 CDC42BPGQ6DT37 1551 aa22.93■■□□□ 1.26
NPTN-206ENST00000563753 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
NPTN-206ENST00000563753 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
NPTN-206ENST00000563753 TMEM132EQ6IEE7 984 aa22.89■■□□□ 1.25
NPTN-206ENST00000563753 CCDC144AA2RUR9 1427 aa22.89■■□□□ 1.25
NPTN-206ENST00000563753 TECPR2O15040 1411 aa22.89■■□□□ 1.25
NPTN-206ENST00000563753 PPLO60437 1756 aa22.88■■□□□ 1.25
NPTN-206ENST00000563753 ABCC11Q96J66 1382 aa22.88■■□□□ 1.25
NPTN-206ENST00000563753 ANKRD30BQ9BXX2 1392 aa22.88■■□□□ 1.25
NPTN-206ENST00000563753 UNC5CLQ8IV45 518 aa22.87■■□□□ 1.25
NPTN-206ENST00000563753 PLEKHH1Q9ULM0 1364 aa22.87■■□□□ 1.25
NPTN-206ENST00000563753 SPATA31A3Q5VYP0 1347 aa22.85■■□□□ 1.25
NPTN-206ENST00000563753 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
NPTN-206ENST00000563753 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.25
NPTN-206ENST00000563753 KRT28Q7Z3Y7 464 aa22.83■■□□□ 1.25
NPTN-206ENST00000563753 MPHOSPH9Q99550 1183 aa22.83■■□□□ 1.25
NPTN-206ENST00000563753 SIRT1Q96EB6 747 aa22.8■■□□□ 1.24
NPTN-206ENST00000563753 YTHDC2Q9H6S0 1430 aaKnown RBP22.8■■□□□ 1.24
NPTN-206ENST00000563753 RALGAPBQ86X10 1494 aa22.79■■□□□ 1.24
NPTN-206ENST00000563753 SLIT2O94813 1529 aa22.79■■□□□ 1.24
NPTN-206ENST00000563753 HAP1P54257 671 aaPredicted RBP22.79■■□□□ 1.24
NPTN-206ENST00000563753 PIK3C2GO75747 1445 aa22.79■■□□□ 1.24
NPTN-206ENST00000563753 PSME1Q06323 249 aa22.78■■□□□ 1.24
NPTN-206ENST00000563753 PHF8Q9UPP1 1060 aa22.78■■□□□ 1.24
NPTN-206ENST00000563753 BLMP54132 1417 aaPredicted RBP22.76■■□□□ 1.23
NPTN-206ENST00000563753 C14orf93Q9H972 538 aaKnown RBP22.76■■□□□ 1.23
NPTN-206ENST00000563753 PLEKHG5O94827 1062 aa22.75■■□□□ 1.23
NPTN-206ENST00000563753 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
NPTN-206ENST00000563753 VPS72Q15906 364 aa22.74■■□□□ 1.23
NPTN-206ENST00000563753 SEPT12Q8IYM1 358 aa22.74■■□□□ 1.23
NPTN-206ENST00000563753 MARF1Q9Y4F3 1742 aaKnown RBP22.74■■□□□ 1.23
NPTN-206ENST00000563753 EP400Q96L91 3159 aa22.73■■□□□ 1.23
NPTN-206ENST00000563753 TNS3Q68CZ2 1445 aa22.73■■□□□ 1.23
NPTN-206ENST00000563753 GLI3P10071 1580 aa22.72■■□□□ 1.23
NPTN-206ENST00000563753 SF3B2Q13435 895 aaKnown RBP22.72■■□□□ 1.23
NPTN-206ENST00000563753 CFAP70Q5T0N1 1121 aa22.72■■□□□ 1.23
NPTN-206ENST00000563753 LMOD2Q6P5Q4 547 aa22.72■■□□□ 1.23
NPTN-206ENST00000563753 DEFB132Q7Z7B7 95 aa22.72■■□□□ 1.23
NPTN-206ENST00000563753 CCDC9Q9Y3X0 531 aaKnown RBP22.72■■□□□ 1.23
NPTN-206ENST00000563753 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
NPTN-206ENST00000563753 KIF1AQ12756 1690 aa22.71■■□□□ 1.23
NPTN-206ENST00000563753 FMN2Q9NZ56 1722 aa22.71■■□□□ 1.23
NPTN-206ENST00000563753 KNDC1Q76NI1 1749 aa22.71■■□□□ 1.23
NPTN-206ENST00000563753 SAFB2Q14151 953 aaKnown RBP eCLIP22.7■■□□□ 1.22
NPTN-206ENST00000563753 PRAM1Q96QH2 718 aa22.7■■□□□ 1.22
NPTN-206ENST00000563753 SBNO1A3KN83 1393 aa22.7■■□□□ 1.22
NPTN-206ENST00000563753 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.7■■□□□ 1.22
NPTN-206ENST00000563753 USP32Q8NFA0 1604 aa22.69■■□□□ 1.22
NPTN-206ENST00000563753 ONECUT3O60422 494 aaPredicted RBP22.69■■□□□ 1.22
NPTN-206ENST00000563753 ARHGEF10O15013 1369 aa22.68■■□□□ 1.22
NPTN-206ENST00000563753 IFT172Q9UG01 1749 aa22.68■■□□□ 1.22
NPTN-206ENST00000563753 POGKQ9P215 609 aa22.67■■□□□ 1.22
NPTN-206ENST00000563753 NRXN1Q9ULB1 1477 aa22.66■■□□□ 1.22
NPTN-206ENST00000563753 FAM83GA6ND36 823 aa22.66■■□□□ 1.22
NPTN-206ENST00000563753 KRT27Q7Z3Y8 459 aa22.66■■□□□ 1.22
NPTN-206ENST00000563753 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
NPTN-206ENST00000563753 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
NPTN-206ENST00000563753 A0A0G2JS52 829 aa22.63■■□□□ 1.21
NPTN-206ENST00000563753 MYT1Q01538 1121 aa22.63■■□□□ 1.21
NPTN-206ENST00000563753 ANKARQ7Z5J8 1434 aa22.61■■□□□ 1.21
NPTN-206ENST00000563753 FAM98CQ17RN3 349 aaKnown RBP22.59■■□□□ 1.21
NPTN-206ENST00000563753 BTG4Q9NY30 223 aa22.59■■□□□ 1.21
NPTN-206ENST00000563753 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
NPTN-206ENST00000563753 BAG6P46379 1132 aa22.57■■□□□ 1.2
NPTN-206ENST00000563753 TRAK1Q9UPV9 953 aa22.57■■□□□ 1.2
NPTN-206ENST00000563753 GPRASP1Q5JY77 1395 aa22.57■■□□□ 1.2
NPTN-206ENST00000563753 DLC1Q96QB1 1528 aa22.56■■□□□ 1.2
NPTN-206ENST00000563753 BRWD3Q6RI45 1802 aa22.55■■□□□ 1.2
NPTN-206ENST00000563753 NWD2Q9ULI1 1742 aa22.55■■□□□ 1.2
NPTN-206ENST00000563753 RGPD8O14715 1765 aaPredicted RBP22.55■■□□□ 1.2
NPTN-206ENST00000563753 MINK1Q8N4C8 1332 aaPredicted RBP22.55■■□□□ 1.2
NPTN-206ENST00000563753 PLCH1Q4KWH8 1693 aa22.54■■□□□ 1.2
NPTN-206ENST00000563753 EIF3AQ14152 1382 aaKnown RBP22.53■■□□□ 1.2
NPTN-206ENST00000563753 PSDA5PKW4 1024 aaPredicted RBP22.53■■□□□ 1.2
NPTN-206ENST00000563753 PRR36Q9H6K5 1346 aa22.53■■□□□ 1.2
NPTN-206ENST00000563753 WASLO00401 505 aaPredicted RBP22.51■■□□□ 1.19
NPTN-206ENST00000563753 NGDNQ8NEJ9 315 aaKnown RBP22.51■■□□□ 1.19
NPTN-206ENST00000563753 PAK3O75914 559 aaPredicted RBP22.5■■□□□ 1.19
NPTN-206ENST00000563753 KDM2AQ9Y2K7 1162 aa22.5■■□□□ 1.19
NPTN-206ENST00000563753 SPATA31A5Q5VU36 1347 aa22.5■■□□□ 1.19
NPTN-206ENST00000563753 SPATA31A7Q8IWB4 1347 aa22.5■■□□□ 1.19
NPTN-206ENST00000563753 ABCA3Q99758 1704 aa22.49■■□□□ 1.19
NPTN-206ENST00000563753 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms