RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 DDX17Q92841 729 aaKnown RBP23.35■■□□□ 1.33
LPCAT4-205ENST00000563748 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
LPCAT4-205ENST00000563748 MEX3CQ5U5Q3 659 aaKnown RBP23.34■■□□□ 1.33
LPCAT4-205ENST00000563748 LRRC59Q96AG4 307 aaKnown RBP23.34■■□□□ 1.33
LPCAT4-205ENST00000563748 ORAI2Q96SN7 254 aa23.32■■□□□ 1.32
LPCAT4-205ENST00000563748 STK26Q9P289 416 aa23.32■■□□□ 1.32
LPCAT4-205ENST00000563748 PNPLA6Q8IY17 1366 aa23.32■■□□□ 1.32
LPCAT4-205ENST00000563748 YTHDC2Q9H6S0 1430 aaKnown RBP23.31■■□□□ 1.32
LPCAT4-205ENST00000563748 TMEM132EQ6IEE7 984 aa23.31■■□□□ 1.32
LPCAT4-205ENST00000563748 NUTM2BA6NNL0 878 aaPredicted RBP23.29■■□□□ 1.32
LPCAT4-205ENST00000563748 NUTM2EB1AL46 878 aaPredicted RBP23.29■■□□□ 1.32
LPCAT4-205ENST00000563748 WAPLQ7Z5K2 1190 aa23.29■■□□□ 1.32
LPCAT4-205ENST00000563748 NUTM2AQ8IVF1 878 aaPredicted RBP23.29■■□□□ 1.32
LPCAT4-205ENST00000563748 C14orf93Q9H972 538 aaKnown RBP23.29■■□□□ 1.32
LPCAT4-205ENST00000563748 SOS2Q07890 1332 aaPredicted RBP23.29■■□□□ 1.32
LPCAT4-205ENST00000563748 ZNF772Q68DY9 489 aaPredicted RBP23.28■■□□□ 1.32
LPCAT4-205ENST00000563748 PLEKHH1Q9ULM0 1364 aa23.28■■□□□ 1.32
LPCAT4-205ENST00000563748 FMN2Q9NZ56 1722 aa23.28■■□□□ 1.32
LPCAT4-205ENST00000563748 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
LPCAT4-205ENST00000563748 COL22A1Q8NFW1 1626 aaPredicted RBP23.24■■□□□ 1.31
LPCAT4-205ENST00000563748 CFAP70Q5T0N1 1121 aa23.24■■□□□ 1.31
LPCAT4-205ENST00000563748 PXDNQ92626 1479 aa23.23■■□□□ 1.31
LPCAT4-205ENST00000563748 DHX57Q6P158 1386 aaKnown RBP23.22■■□□□ 1.31
LPCAT4-205ENST00000563748 ESCO1Q5FWF5 840 aa23.22■■□□□ 1.31
LPCAT4-205ENST00000563748 AFF2P51816 1311 aa23.21■■□□□ 1.31
LPCAT4-205ENST00000563748 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
LPCAT4-205ENST00000563748 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
LPCAT4-205ENST00000563748 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
LPCAT4-205ENST00000563748 ADGRB1O14514 1584 aa23.2■■□□□ 1.3
LPCAT4-205ENST00000563748 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
LPCAT4-205ENST00000563748 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
LPCAT4-205ENST00000563748 CDK12Q9NYV4 1490 aaPredicted RBP23.16■■□□□ 1.3
LPCAT4-205ENST00000563748 C8orf37Q96NL8 207 aa23.15■■□□□ 1.3
LPCAT4-205ENST00000563748 FOXO3O43524 673 aa23.14■■□□□ 1.3
LPCAT4-205ENST00000563748 RXRBP28702 533 aa23.14■■□□□ 1.3
LPCAT4-205ENST00000563748 PRAM1Q96QH2 718 aa23.14■■□□□ 1.29
LPCAT4-205ENST00000563748 ADGRB2O60241 1585 aa23.14■■□□□ 1.29
LPCAT4-205ENST00000563748 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
LPCAT4-205ENST00000563748 ADAMTS2O95450 1211 aa23.13■■□□□ 1.29
LPCAT4-205ENST00000563748 DCAF11Q8TEB1 546 aa23.13■■□□□ 1.29
LPCAT4-205ENST00000563748 STAC3Q96MF2 364 aa23.13■■□□□ 1.29
LPCAT4-205ENST00000563748 XPCQ01831 940 aaPredicted RBP23.11■■□□□ 1.29
LPCAT4-205ENST00000563748 KDM2AQ9Y2K7 1162 aa23.11■■□□□ 1.29
LPCAT4-205ENST00000563748 ZNF316A6NFI3 1004 aaPredicted RBP23.1■■□□□ 1.29
LPCAT4-205ENST00000563748 NGLY1Q96IV0 654 aa23.1■■□□□ 1.29
LPCAT4-205ENST00000563748 USP32Q8NFA0 1604 aa23.09■■□□□ 1.29
LPCAT4-205ENST00000563748 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.29
LPCAT4-205ENST00000563748 QTRT2Q9H974 415 aaKnown RBP23.07■■□□□ 1.28
LPCAT4-205ENST00000563748 POGKQ9P215 609 aa23.07■■□□□ 1.28
LPCAT4-205ENST00000563748 ANKARQ7Z5J8 1434 aa23.06■■□□□ 1.28
LPCAT4-205ENST00000563748 SPATA31A3Q5VYP0 1347 aa23.06■■□□□ 1.28
LPCAT4-205ENST00000563748 ARHGEF28Q8N1W1 1705 aaKnown RBP23.06■■□□□ 1.28
LPCAT4-205ENST00000563748 RBM6P78332 1123 aaKnown RBP23.05■■□□□ 1.28
LPCAT4-205ENST00000563748 FNBP4Q8N3X1 1017 aaPredicted RBP23.05■■□□□ 1.28
LPCAT4-205ENST00000563748 PHF8Q9UPP1 1060 aa23.05■■□□□ 1.28
LPCAT4-205ENST00000563748 TRAK1Q9UPV9 953 aa23.05■■□□□ 1.28
LPCAT4-205ENST00000563748 RGS12O14924 1447 aa23.04■■□□□ 1.28
LPCAT4-205ENST00000563748 DIEXFQ68CQ4 756 aaKnown RBP23.03■■□□□ 1.28
LPCAT4-205ENST00000563748 KRT28Q7Z3Y7 464 aa23.03■■□□□ 1.28
LPCAT4-205ENST00000563748 KIAA1210Q9ULL0 1709 aa23.03■■□□□ 1.28
LPCAT4-205ENST00000563748 USP21Q9UK80 565 aa23.02■■□□□ 1.28
LPCAT4-205ENST00000563748 TNS3Q68CZ2 1445 aa23.01■■□□□ 1.27
LPCAT4-205ENST00000563748 ATRNO75882 1429 aa23.01■■□□□ 1.27
LPCAT4-205ENST00000563748 UPF1Q92900 1129 aaKnown RBP eCLIP23■■□□□ 1.27
LPCAT4-205ENST00000563748 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
LPCAT4-205ENST00000563748 TULP4Q9NRJ4 1543 aa22.99■■□□□ 1.27
LPCAT4-205ENST00000563748 EIF3AQ14152 1382 aaKnown RBP22.99■■□□□ 1.27
LPCAT4-205ENST00000563748 BCL9LQ86UU0 1499 aa22.99■■□□□ 1.27
LPCAT4-205ENST00000563748 ABCA3Q99758 1704 aa22.99■■□□□ 1.27
LPCAT4-205ENST00000563748 HIRIP3Q9BW71 556 aaPredicted RBP22.99■■□□□ 1.27
LPCAT4-205ENST00000563748 SBNO1A3KN83 1393 aa22.98■■□□□ 1.27
LPCAT4-205ENST00000563748 PSME1Q06323 249 aa22.98■■□□□ 1.27
LPCAT4-205ENST00000563748 TRPC5Q9UL62 973 aaPredicted RBP22.98■■□□□ 1.27
LPCAT4-205ENST00000563748 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
LPCAT4-205ENST00000563748 TRPM3Q9HCF6 1732 aaPredicted RBP22.97■■□□□ 1.27
LPCAT4-205ENST00000563748 PRR36Q9H6K5 1346 aa22.95■■□□□ 1.26
LPCAT4-205ENST00000563748 ITSN1Q15811 1721 aa22.95■■□□□ 1.26
LPCAT4-205ENST00000563748 WASLO00401 505 aaPredicted RBP22.94■■□□□ 1.26
LPCAT4-205ENST00000563748 PMFBP1Q8TBY8 1022 aa22.94■■□□□ 1.26
LPCAT4-205ENST00000563748 ALS2Q96Q42 1657 aa22.93■■□□□ 1.26
LPCAT4-205ENST00000563748 SLIT2O94813 1529 aa22.93■■□□□ 1.26
LPCAT4-205ENST00000563748 ARHGEF10O15013 1369 aa22.93■■□□□ 1.26
LPCAT4-205ENST00000563748 PLCH1Q4KWH8 1693 aa22.9■■□□□ 1.26
LPCAT4-205ENST00000563748 ATP7BP35670 1465 aa22.9■■□□□ 1.26
LPCAT4-205ENST00000563748 NWD2Q9ULI1 1742 aa22.9■■□□□ 1.26
LPCAT4-205ENST00000563748 CABLES1Q8TDN4 633 aa22.89■■□□□ 1.25
LPCAT4-205ENST00000563748 GPRASP1Q5JY77 1395 aa22.88■■□□□ 1.25
LPCAT4-205ENST00000563748 TOPAZ1Q8N9V7 1692 aa22.87■■□□□ 1.25
LPCAT4-205ENST00000563748 LMOD2Q6P5Q4 547 aa22.87■■□□□ 1.25
LPCAT4-205ENST00000563748 UNC5CLQ8IV45 518 aa22.87■■□□□ 1.25
LPCAT4-205ENST00000563748 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
LPCAT4-205ENST00000563748 GLI3P10071 1580 aa22.86■■□□□ 1.25
LPCAT4-205ENST00000563748 HAP1P54257 671 aaPredicted RBP22.86■■□□□ 1.25
LPCAT4-205ENST00000563748 GJD4Q96KN9 370 aaPredicted RBP22.86■■□□□ 1.25
LPCAT4-205ENST00000563748 CRYBG1Q9Y4K1 1723 aa22.86■■□□□ 1.25
LPCAT4-205ENST00000563748 ATAD2Q6PL18 1390 aa22.85■■□□□ 1.25
LPCAT4-205ENST00000563748 NBPF1Q3BBV0 1214 aa22.85■■□□□ 1.25
LPCAT4-205ENST00000563748 RALGAPBQ86X10 1494 aa22.84■■□□□ 1.25
LPCAT4-205ENST00000563748 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
LPCAT4-205ENST00000563748 NGDNQ8NEJ9 315 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms