RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 AMHR2Q16671 573 aa7.18□□□□□ -1.26
LINC01416-201ENST00000563553 SYMPKQ92797 1274 aaKnown RBP7.17□□□□□ -1.26
LINC01416-201ENST00000563553 PCDHGC3Q9UN70 934 aa7.17□□□□□ -1.26
LINC01416-201ENST00000563553 DXOO77932 396 aaKnown RBP7.16□□□□□ -1.26
LINC01416-201ENST00000563553 USP46P62068 366 aa7.16□□□□□ -1.26
LINC01416-201ENST00000563553 RPIAP49247 311 aa7.16□□□□□ -1.26
LINC01416-201ENST00000563553 GRIPAP1Q4V328 841 aa7.16□□□□□ -1.26
LINC01416-201ENST00000563553 USB1Q9BQ65 265 aaKnown RBP7.16□□□□□ -1.26
LINC01416-201ENST00000563553 SSTR3P32745 418 aaPredicted RBP7.15□□□□□ -1.27
LINC01416-201ENST00000563553 MYT1Q01538 1121 aa7.15□□□□□ -1.27
LINC01416-201ENST00000563553 Q3C1V9 767 aa7.15□□□□□ -1.27
LINC01416-201ENST00000563553 GIGYF2Q6Y7W6 1299 aaKnown RBP7.14□□□□□ -1.27
LINC01416-201ENST00000563553 PARP9Q8IXQ6 854 aa7.13□□□□□ -1.27
LINC01416-201ENST00000563553 SPIRE2Q8WWL2 714 aa7.13□□□□□ -1.27
LINC01416-201ENST00000563553 TOR4AQ9NXH8 423 aa7.13□□□□□ -1.27
LINC01416-201ENST00000563553 KRI1Q8N9T8 703 aaKnown RBP7.12□□□□□ -1.27
LINC01416-201ENST00000563553 TRIM66O15016 1216 aa7.12□□□□□ -1.27
LINC01416-201ENST00000563553 FOXC1Q12948 553 aa7.12□□□□□ -1.27
LINC01416-201ENST00000563553 DGAT1O75907 488 aa7.11□□□□□ -1.27
LINC01416-201ENST00000563553 MS4A1P11836 297 aa7.11□□□□□ -1.27
LINC01416-201ENST00000563553 MOXD2PA6NHM9 499 aa7.11□□□□□ -1.27
LINC01416-201ENST00000563553 POTECB2RU33 542 aa7.11□□□□□ -1.27
LINC01416-201ENST00000563553 NDUFV2P19404 249 aa7.11□□□□□ -1.27
LINC01416-201ENST00000563553 TRIM32Q13049 653 aa7.11□□□□□ -1.27
LINC01416-201ENST00000563553 TTLL12Q14166 644 aaPredicted RBP7.11□□□□□ -1.27
LINC01416-201ENST00000563553 FAM187AA6NFU0 413 aa7.1□□□□□ -1.27
LINC01416-201ENST00000563553 PKDCCQ504Y2 493 aa7.1□□□□□ -1.27
LINC01416-201ENST00000563553 ST8SIA5O15466 376 aa7.09□□□□□ -1.27
LINC01416-201ENST00000563553 FDX1P10109 184 aa7.09□□□□□ -1.27
LINC01416-201ENST00000563553 SKOR1P84550 965 aa7.09□□□□□ -1.27
LINC01416-201ENST00000563553 JUNDP17535 347 aa7.09□□□□□ -1.28
LINC01416-201ENST00000563553 RETREG3Q86VR2 466 aa7.09□□□□□ -1.28
LINC01416-201ENST00000563553 NUTM1Q86Y26 1132 aa7.09□□□□□ -1.28
LINC01416-201ENST00000563553 CD2BP2O95400 341 aaKnown RBP7.08□□□□□ -1.28
LINC01416-201ENST00000563553 AAASQ9NRG9 546 aa7.08□□□□□ -1.28
LINC01416-201ENST00000563553 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
LINC01416-201ENST00000563553 BEGAINQ9BUH8 593 aa7.07□□□□□ -1.28
LINC01416-201ENST00000563553 WNT7AO00755 349 aa7.07□□□□□ -1.28
LINC01416-201ENST00000563553 AVPP01185 164 aa7.07□□□□□ -1.28
LINC01416-201ENST00000563553 DACH1Q9UI36 760 aa7.06□□□□□ -1.28
LINC01416-201ENST00000563553 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
LINC01416-201ENST00000563553 MRGPRX2Q96LB1 330 aa7.06□□□□□ -1.28
LINC01416-201ENST00000563553 AK7Q96M32 723 aa7.05□□□□□ -1.28
LINC01416-201ENST00000563553 TBC1D2Q9BYX2 928 aa7.05□□□□□ -1.28
LINC01416-201ENST00000563553 ZBTB24O43167 697 aaPredicted RBP7.04□□□□□ -1.28
LINC01416-201ENST00000563553 SMPD1P17405 629 aa7.04□□□□□ -1.28
LINC01416-201ENST00000563553 ZNF787Q6DD87 383 aa7.04□□□□□ -1.28
LINC01416-201ENST00000563553 RSBN1LQ6PCB5 846 aaPredicted RBP7.04□□□□□ -1.28
LINC01416-201ENST00000563553 PCDHB15Q9Y5E8 787 aa7.04□□□□□ -1.28
LINC01416-201ENST00000563553 C6orf229H3BNL8 230 aa7.04□□□□□ -1.28
LINC01416-201ENST00000563553 CCDC24Q8N4L8 307 aa7.04□□□□□ -1.28
LINC01416-201ENST00000563553 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
LINC01416-201ENST00000563553 SLC24A3Q9HC58 644 aa7.04□□□□□ -1.28
LINC01416-201ENST00000563553 J3QL48 77 aa7.02□□□□□ -1.28
LINC01416-201ENST00000563553 PDE4DQ08499 809 aa7.02□□□□□ -1.28
LINC01416-201ENST00000563553 GJA5P36382 358 aa7.02□□□□□ -1.29
LINC01416-201ENST00000563553 CYP4X1Q8N118 509 aa7.02□□□□□ -1.29
LINC01416-201ENST00000563553 PRR7Q8TB68 274 aa7.01□□□□□ -1.29
LINC01416-201ENST00000563553 CFAP99D6REC4 459 aa7.01□□□□□ -1.29
LINC01416-201ENST00000563553 SPTLC1O15269 473 aa7.01□□□□□ -1.29
LINC01416-201ENST00000563553 WNT7BP56706 349 aa7.01□□□□□ -1.29
LINC01416-201ENST00000563553 MTMR2Q13614 643 aa7.01□□□□□ -1.29
LINC01416-201ENST00000563553 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
LINC01416-201ENST00000563553 ZNF775Q96BV0 537 aaPredicted RBP7.01□□□□□ -1.29
LINC01416-201ENST00000563553 PTPRNQ16849 979 aa7□□□□□ -1.29
LINC01416-201ENST00000563553 SNIP1Q8TAD8 396 aaKnown RBP7□□□□□ -1.29
LINC01416-201ENST00000563553 SIAH2O43255 324 aa7□□□□□ -1.29
LINC01416-201ENST00000563553 CCNYL3P0C7X3 344 aa7□□□□□ -1.29
LINC01416-201ENST00000563553 SMCPP49901 116 aaPredicted RBP7□□□□□ -1.29
LINC01416-201ENST00000563553 DESI1Q6ICB0 168 aa7□□□□□ -1.29
LINC01416-201ENST00000563553 LIMD1Q9UGP4 676 aa7□□□□□ -1.29
LINC01416-201ENST00000563553 EVA1BQ9NVM1 165 aa6.99□□□□□ -1.29
LINC01416-201ENST00000563553 HRCP23327 699 aa6.99□□□□□ -1.29
LINC01416-201ENST00000563553 SH3BP2P78314 561 aa6.99□□□□□ -1.29
LINC01416-201ENST00000563553 MYSM1Q5VVJ2 828 aa6.99□□□□□ -1.29
LINC01416-201ENST00000563553 TTC24A2A3L6 582 aaPredicted RBP6.98□□□□□ -1.29
LINC01416-201ENST00000563553 CABLES1Q8TDN4 633 aa6.98□□□□□ -1.29
LINC01416-201ENST00000563553 HPS1Q92902 700 aa6.98□□□□□ -1.29
LINC01416-201ENST00000563553 UNC93B1Q9H1C4 597 aa6.98□□□□□ -1.29
LINC01416-201ENST00000563553 QPCTQ16769 361 aa6.98□□□□□ -1.29
LINC01416-201ENST00000563553 SPDYE5A6NIY4 337 aa6.96□□□□□ -1.29
LINC01416-201ENST00000563553 F12P00748 615 aaPredicted RBP6.96□□□□□ -1.29
LINC01416-201ENST00000563553 CTC1Q2NKJ3 1217 aa6.96□□□□□ -1.29
LINC01416-201ENST00000563553 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.29
LINC01416-201ENST00000563553 RIC3Q7Z5B4 369 aa6.96□□□□□ -1.29
LINC01416-201ENST00000563553 GMPR2Q9P2T1 348 aaKnown RBP6.96□□□□□ -1.29
LINC01416-201ENST00000563553 AXIN1O15169 862 aa6.96□□□□□ -1.3
LINC01416-201ENST00000563553 PER1O15534 1290 aaPredicted RBP6.96□□□□□ -1.3
LINC01416-201ENST00000563553 KCNH2Q12809 1159 aa6.96□□□□□ -1.3
LINC01416-201ENST00000563553 LYPD8Q6UX82 237 aa6.96□□□□□ -1.3
LINC01416-201ENST00000563553 FBXO31Q5XUX0 539 aaPredicted RBP6.95□□□□□ -1.3
LINC01416-201ENST00000563553 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
LINC01416-201ENST00000563553 PRPF38BQ5VTL8 546 aaKnown RBP6.95□□□□□ -1.3
LINC01416-201ENST00000563553 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
LINC01416-201ENST00000563553 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
LINC01416-201ENST00000563553 BAP1Q92560 729 aa6.94□□□□□ -1.3
LINC01416-201ENST00000563553 ZBTB3Q9H5J0 574 aa6.94□□□□□ -1.3
LINC01416-201ENST00000563553 LILRB3O75022 631 aa6.93□□□□□ -1.3
LINC01416-201ENST00000563553 CSPP1Q1MSJ5 1256 aa6.93□□□□□ -1.3
LINC01416-201ENST00000563553 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms