RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 ADGRB1O14514 1584 aa18.49■□□□□ 0.55
PKM-208ENST00000563275 CFAP70Q5T0N1 1121 aa18.48■□□□□ 0.55
PKM-208ENST00000563275 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
PKM-208ENST00000563275 STK26Q9P289 416 aa18.48■□□□□ 0.55
PKM-208ENST00000563275 DHX57Q6P158 1386 aaKnown RBP18.47■□□□□ 0.55
PKM-208ENST00000563275 ORAI2Q96SN7 254 aa18.47■□□□□ 0.55
PKM-208ENST00000563275 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
PKM-208ENST00000563275 DLC1Q96QB1 1528 aa18.46■□□□□ 0.55
PKM-208ENST00000563275 POTEAQ6S8J7 498 aa18.46■□□□□ 0.55
PKM-208ENST00000563275 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
PKM-208ENST00000563275 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
PKM-208ENST00000563275 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
PKM-208ENST00000563275 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
PKM-208ENST00000563275 FMN2Q9NZ56 1722 aa18.41■□□□□ 0.54
PKM-208ENST00000563275 PXDNQ92626 1479 aa18.4■□□□□ 0.54
PKM-208ENST00000563275 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
PKM-208ENST00000563275 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
PKM-208ENST00000563275 PRAM1Q96QH2 718 aa18.37■□□□□ 0.53
PKM-208ENST00000563275 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
PKM-208ENST00000563275 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
PKM-208ENST00000563275 COL22A1Q8NFW1 1626 aaPredicted RBP18.37■□□□□ 0.53
PKM-208ENST00000563275 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
PKM-208ENST00000563275 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
PKM-208ENST00000563275 ZNF772Q68DY9 489 aaPredicted RBP18.34■□□□□ 0.53
PKM-208ENST00000563275 NUTM2BA6NNL0 878 aaPredicted RBP18.33■□□□□ 0.52
PKM-208ENST00000563275 NUTM2EB1AL46 878 aaPredicted RBP18.33■□□□□ 0.52
PKM-208ENST00000563275 FOXO3O43524 673 aa18.33■□□□□ 0.52
PKM-208ENST00000563275 NUTM2AQ8IVF1 878 aaPredicted RBP18.33■□□□□ 0.52
PKM-208ENST00000563275 KIF1AQ12756 1690 aa18.33■□□□□ 0.52
PKM-208ENST00000563275 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
PKM-208ENST00000563275 NUTM2FA1L443 756 aa18.32■□□□□ 0.52
PKM-208ENST00000563275 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
PKM-208ENST00000563275 USP32Q8NFA0 1604 aa18.31■□□□□ 0.52
PKM-208ENST00000563275 AFF2P51816 1311 aa18.3■□□□□ 0.52
PKM-208ENST00000563275 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
PKM-208ENST00000563275 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
PKM-208ENST00000563275 POGKQ9P215 609 aa18.29■□□□□ 0.52
PKM-208ENST00000563275 XPCQ01831 940 aaPredicted RBP18.28■□□□□ 0.52
PKM-208ENST00000563275 ARHGEF28Q8N1W1 1705 aaKnown RBP18.28■□□□□ 0.52
PKM-208ENST00000563275 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.52
PKM-208ENST00000563275 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.52
PKM-208ENST00000563275 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.51
PKM-208ENST00000563275 CDK12Q9NYV4 1490 aaPredicted RBP18.26■□□□□ 0.51
PKM-208ENST00000563275 C8orf37Q96NL8 207 aa18.26■□□□□ 0.51
PKM-208ENST00000563275 TULP4Q9NRJ4 1543 aa18.26■□□□□ 0.51
PKM-208ENST00000563275 PRR36Q9H6K5 1346 aa18.25■□□□□ 0.51
PKM-208ENST00000563275 ADAMTS2O95450 1211 aa18.24■□□□□ 0.51
PKM-208ENST00000563275 FNBP4Q8N3X1 1017 aaPredicted RBP18.24■□□□□ 0.51
PKM-208ENST00000563275 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
PKM-208ENST00000563275 EIF3AQ14152 1382 aaKnown RBP18.24■□□□□ 0.51
PKM-208ENST00000563275 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
PKM-208ENST00000563275 WASLO00401 505 aaPredicted RBP18.23■□□□□ 0.51
PKM-208ENST00000563275 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
PKM-208ENST00000563275 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
PKM-208ENST00000563275 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
PKM-208ENST00000563275 RXRBP28702 533 aa18.22■□□□□ 0.51
PKM-208ENST00000563275 NBPF1Q3BBV0 1214 aa18.22■□□□□ 0.51
PKM-208ENST00000563275 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
PKM-208ENST00000563275 ATP7BP35670 1465 aa18.2■□□□□ 0.5
PKM-208ENST00000563275 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
PKM-208ENST00000563275 SIN3AQ96ST3 1273 aa18.19■□□□□ 0.5
PKM-208ENST00000563275 BCL9LQ86UU0 1499 aa18.19■□□□□ 0.5
PKM-208ENST00000563275 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
PKM-208ENST00000563275 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
PKM-208ENST00000563275 ATRNO75882 1429 aa18.18■□□□□ 0.5
PKM-208ENST00000563275 PSME1Q06323 249 aa18.18■□□□□ 0.5
PKM-208ENST00000563275 QTRT2Q9H974 415 aaKnown RBP18.18■□□□□ 0.5
PKM-208ENST00000563275 RGS12O14924 1447 aa18.17■□□□□ 0.5
PKM-208ENST00000563275 RBM6P78332 1123 aaKnown RBP18.17■□□□□ 0.5
PKM-208ENST00000563275 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
PKM-208ENST00000563275 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
PKM-208ENST00000563275 USP21Q9UK80 565 aa18.16■□□□□ 0.5
PKM-208ENST00000563275 SLIT2O94813 1529 aa18.16■□□□□ 0.5
PKM-208ENST00000563275 TRPC5Q9UL62 973 aaPredicted RBP18.14■□□□□ 0.49
PKM-208ENST00000563275 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
PKM-208ENST00000563275 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
PKM-208ENST00000563275 ABCA3Q99758 1704 aa18.14■□□□□ 0.49
PKM-208ENST00000563275 TRPM1Q7Z4N2 1603 aa18.13■□□□□ 0.49
PKM-208ENST00000563275 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
PKM-208ENST00000563275 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
PKM-208ENST00000563275 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.12■□□□□ 0.49
PKM-208ENST00000563275 POLR3AO14802 1390 aaPredicted RBP18.12■□□□□ 0.49
PKM-208ENST00000563275 GPRASP1Q5JY77 1395 aa18.12■□□□□ 0.49
PKM-208ENST00000563275 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
PKM-208ENST00000563275 CENPJQ9HC77 1338 aaPredicted RBP18.11■□□□□ 0.49
PKM-208ENST00000563275 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
PKM-208ENST00000563275 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
PKM-208ENST00000563275 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
PKM-208ENST00000563275 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.49
PKM-208ENST00000563275 NEUROD1Q13562 356 aa18.09■□□□□ 0.49
PKM-208ENST00000563275 CCDC61Q9Y6R9 512 aa18.09■□□□□ 0.49
PKM-208ENST00000563275 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.48
PKM-208ENST00000563275 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.48
PKM-208ENST00000563275 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
PKM-208ENST00000563275 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
PKM-208ENST00000563275 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
PKM-208ENST00000563275 GJD4Q96KN9 370 aaPredicted RBP18.06■□□□□ 0.48
PKM-208ENST00000563275 GLI3P10071 1580 aa18.05■□□□□ 0.48
PKM-208ENST00000563275 NWD2Q9ULI1 1742 aa18.05■□□□□ 0.48
PKM-208ENST00000563275 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms