RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 FAM50AQ14320 339 aaKnown RBP12.93□□□□□ -0.34
CKLF-208ENST00000563092 QTRT2Q9H974 415 aaKnown RBP12.93□□□□□ -0.34
CKLF-208ENST00000563092 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
CKLF-208ENST00000563092 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
CKLF-208ENST00000563092 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
CKLF-208ENST00000563092 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
CKLF-208ENST00000563092 C8orf37Q96NL8 207 aa12.9□□□□□ -0.34
CKLF-208ENST00000563092 NUP155O75694 1391 aa12.9□□□□□ -0.34
CKLF-208ENST00000563092 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
CKLF-208ENST00000563092 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
CKLF-208ENST00000563092 NEXMIFQ5QGS0 1516 aa12.89□□□□□ -0.35
CKLF-208ENST00000563092 EP400Q96L91 3159 aa12.89□□□□□ -0.35
CKLF-208ENST00000563092 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
CKLF-208ENST00000563092 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
CKLF-208ENST00000563092 ATAD2Q6PL18 1390 aa12.88□□□□□ -0.35
CKLF-208ENST00000563092 NGLY1Q96IV0 654 aa12.87□□□□□ -0.35
CKLF-208ENST00000563092 SPHKAPQ2M3C7 1700 aa12.87□□□□□ -0.35
CKLF-208ENST00000563092 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
CKLF-208ENST00000563092 ATRNO75882 1429 aa12.87□□□□□ -0.35
CKLF-208ENST00000563092 MYOM2P54296 1465 aa12.85□□□□□ -0.35
CKLF-208ENST00000563092 ROBO2Q9HCK4 1378 aa12.84□□□□□ -0.35
CKLF-208ENST00000563092 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
CKLF-208ENST00000563092 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
CKLF-208ENST00000563092 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
CKLF-208ENST00000563092 ORAI2Q96SN7 254 aa12.83□□□□□ -0.36
CKLF-208ENST00000563092 USP21Q9UK80 565 aa12.83□□□□□ -0.36
CKLF-208ENST00000563092 BCL9LQ86UU0 1499 aa12.83□□□□□ -0.36
CKLF-208ENST00000563092 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
CKLF-208ENST00000563092 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
CKLF-208ENST00000563092 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
CKLF-208ENST00000563092 PXDNQ92626 1479 aa12.8□□□□□ -0.36
CKLF-208ENST00000563092 ZNF326Q5BKZ1 582 aaKnown RBP12.8□□□□□ -0.36
CKLF-208ENST00000563092 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
CKLF-208ENST00000563092 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
CKLF-208ENST00000563092 CDC42BPGQ6DT37 1551 aa12.78□□□□□ -0.36
CKLF-208ENST00000563092 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
CKLF-208ENST00000563092 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
CKLF-208ENST00000563092 RPGRIP1LQ68CZ1 1315 aa12.76□□□□□ -0.37
CKLF-208ENST00000563092 NPHP3Q7Z494 1330 aa12.76□□□□□ -0.37
CKLF-208ENST00000563092 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.76□□□□□ -0.37
CKLF-208ENST00000563092 MARF1Q9Y4F3 1742 aaKnown RBP12.76□□□□□ -0.37
CKLF-208ENST00000563092 SLIT2O94813 1529 aa12.75□□□□□ -0.37
CKLF-208ENST00000563092 GJD4Q96KN9 370 aaPredicted RBP12.75□□□□□ -0.37
CKLF-208ENST00000563092 KIF1BO60333 1816 aa12.74□□□□□ -0.37
CKLF-208ENST00000563092 GLI3P10071 1580 aa12.73□□□□□ -0.37
CKLF-208ENST00000563092 TECPR2O15040 1411 aa12.73□□□□□ -0.37
CKLF-208ENST00000563092 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
CKLF-208ENST00000563092 RALGAPBQ86X10 1494 aa12.72□□□□□ -0.37
CKLF-208ENST00000563092 NAIPQ13075 1403 aa12.72□□□□□ -0.37
CKLF-208ENST00000563092 ESCO1Q5FWF5 840 aa12.71□□□□□ -0.37
CKLF-208ENST00000563092 UNC5CLQ8IV45 518 aa12.71□□□□□ -0.37
CKLF-208ENST00000563092 PPLO60437 1756 aa12.71□□□□□ -0.38
CKLF-208ENST00000563092 LRPPRCP42704 1394 aaKnown RBP12.7□□□□□ -0.38
CKLF-208ENST00000563092 FOXO3O43524 673 aa12.7□□□□□ -0.38
CKLF-208ENST00000563092 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
CKLF-208ENST00000563092 ITGAEP38570 1179 aa12.7□□□□□ -0.38
CKLF-208ENST00000563092 LRP5O75197 1615 aa12.7□□□□□ -0.38
CKLF-208ENST00000563092 SPATA31A3Q5VYP0 1347 aa12.69□□□□□ -0.38
CKLF-208ENST00000563092 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
CKLF-208ENST00000563092 USP32Q8NFA0 1604 aa12.68□□□□□ -0.38
CKLF-208ENST00000563092 ABCC11Q96J66 1382 aa12.68□□□□□ -0.38
CKLF-208ENST00000563092 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
CKLF-208ENST00000563092 RRBP1Q9P2E9 1410 aaKnown RBP12.67□□□□□ -0.38
CKLF-208ENST00000563092 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
CKLF-208ENST00000563092 KNDC1Q76NI1 1749 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 FMN2Q9NZ56 1722 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 SPATA31E1Q6ZUB1 1445 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 ZBTB22O15209 634 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 VPS72Q15906 364 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.38
CKLF-208ENST00000563092 WAPLQ7Z5K2 1190 aa12.64□□□□□ -0.39
CKLF-208ENST00000563092 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
CKLF-208ENST00000563092 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
CKLF-208ENST00000563092 PLEKHH1Q9ULM0 1364 aa12.64□□□□□ -0.39
CKLF-208ENST00000563092 NWD2Q9ULI1 1742 aa12.63□□□□□ -0.39
CKLF-208ENST00000563092 PIK3C2GO75747 1445 aa12.62□□□□□ -0.39
CKLF-208ENST00000563092 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
CKLF-208ENST00000563092 ANKRD30BQ9BXX2 1392 aa12.62□□□□□ -0.39
CKLF-208ENST00000563092 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
CKLF-208ENST00000563092 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
CKLF-208ENST00000563092 KRT28Q7Z3Y7 464 aa12.61□□□□□ -0.39
CKLF-208ENST00000563092 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
CKLF-208ENST00000563092 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
CKLF-208ENST00000563092 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
CKLF-208ENST00000563092 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
CKLF-208ENST00000563092 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
CKLF-208ENST00000563092 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
CKLF-208ENST00000563092 STK26Q9P289 416 aa12.59□□□□□ -0.39
CKLF-208ENST00000563092 DISP2A7MBM2 1401 aa12.58□□□□□ -0.4
CKLF-208ENST00000563092 HRCP23327 699 aa12.58□□□□□ -0.4
CKLF-208ENST00000563092 SF3B2Q13435 895 aaKnown RBP12.58□□□□□ -0.4
CKLF-208ENST00000563092 TMEM132EQ6IEE7 984 aa12.58□□□□□ -0.4
CKLF-208ENST00000563092 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
CKLF-208ENST00000563092 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
CKLF-208ENST00000563092 FAM83GA6ND36 823 aa12.57□□□□□ -0.4
CKLF-208ENST00000563092 PSME1Q06323 249 aa12.57□□□□□ -0.4
CKLF-208ENST00000563092 CABLES1Q8TDN4 633 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms