RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 SNIP1Q8TAD8 396 aaKnown RBP9.11□□□□□ -0.95
DENND4A-205ENST00000562540 SLC27A5Q9Y2P5 690 aa9.11□□□□□ -0.95
DENND4A-205ENST00000562540 FMNL1O95466 1100 aaPredicted RBP9.1□□□□□ -0.95
DENND4A-205ENST00000562540 FECHP22830 423 aa9.1□□□□□ -0.95
DENND4A-205ENST00000562540 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
DENND4A-205ENST00000562540 ZBTB24O43167 697 aaPredicted RBP9.09□□□□□ -0.95
DENND4A-205ENST00000562540 GPR37O15354 613 aa9.08□□□□□ -0.96
DENND4A-205ENST00000562540 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
DENND4A-205ENST00000562540 PLCB2Q00722 1185 aa9.08□□□□□ -0.96
DENND4A-205ENST00000562540 HPS1Q92902 700 aa9.08□□□□□ -0.96
DENND4A-205ENST00000562540 MRGPRX2Q96LB1 330 aa9.08□□□□□ -0.96
DENND4A-205ENST00000562540 DAXXQ9UER7 740 aaPredicted RBP9.08□□□□□ -0.96
DENND4A-205ENST00000562540 DDX11L8A8MPP1 907 aa9.07□□□□□ -0.96
DENND4A-205ENST00000562540 ATP6V1AP38606 617 aa9.07□□□□□ -0.96
DENND4A-205ENST00000562540 TRIM32Q13049 653 aa9.06□□□□□ -0.96
DENND4A-205ENST00000562540 BRICD5Q6PL45 260 aa9.06□□□□□ -0.96
DENND4A-205ENST00000562540 RNF19BQ6ZMZ0 732 aa9.06□□□□□ -0.96
DENND4A-205ENST00000562540 NLRP7Q8WX94 980 aa9.06□□□□□ -0.96
DENND4A-205ENST00000562540 MSS51Q4VC12 460 aa9.05□□□□□ -0.96
DENND4A-205ENST00000562540 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
DENND4A-205ENST00000562540 GMPRP36959 345 aa9.04□□□□□ -0.96
DENND4A-205ENST00000562540 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
DENND4A-205ENST00000562540 FAM181BA6NEQ2 426 aa9.03□□□□□ -0.96
DENND4A-205ENST00000562540 SULF1Q8IWU6 871 aa9.03□□□□□ -0.96
DENND4A-205ENST00000562540 GPIHBP1Q8IV16 184 aa9.02□□□□□ -0.97
DENND4A-205ENST00000562540 ZSCAN1Q8NBB4 408 aa9.02□□□□□ -0.97
DENND4A-205ENST00000562540 GCGRP47871 477 aa9.01□□□□□ -0.97
DENND4A-205ENST00000562540 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
DENND4A-205ENST00000562540 PHOX2BQ99453 314 aa9□□□□□ -0.97
DENND4A-205ENST00000562540 NXF1Q9UBU9 619 aaKnown RBP9□□□□□ -0.97
DENND4A-205ENST00000562540 VEGFBP49765 207 aa8.98□□□□□ -0.97
DENND4A-205ENST00000562540 MMP16P51512 607 aa8.98□□□□□ -0.97
DENND4A-205ENST00000562540 HAP1P54257 671 aaPredicted RBP8.97□□□□□ -0.97
DENND4A-205ENST00000562540 SKOR1P84550 965 aa8.97□□□□□ -0.97
DENND4A-205ENST00000562540 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
DENND4A-205ENST00000562540 BMP1P13497 986 aa8.96□□□□□ -0.98
DENND4A-205ENST00000562540 GRIPAP1Q4V328 841 aa8.96□□□□□ -0.98
DENND4A-205ENST00000562540 RC3H1Q5TC82 1133 aaKnown RBP8.96□□□□□ -0.98
DENND4A-205ENST00000562540 IRF7Q92985 503 aa8.95□□□□□ -0.98
DENND4A-205ENST00000562540 ERBB4Q15303 1308 aa8.95□□□□□ -0.98
DENND4A-205ENST00000562540 TRIM46Q7Z4K8 759 aa8.94□□□□□ -0.98
DENND4A-205ENST00000562540 H3BM21 787 aa8.93□□□□□ -0.98
DENND4A-205ENST00000562540 DXOO77932 396 aaKnown RBP8.93□□□□□ -0.98
DENND4A-205ENST00000562540 SUZ12Q15022 739 aaKnown RBP8.93□□□□□ -0.98
DENND4A-205ENST00000562540 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
DENND4A-205ENST00000562540 Q3C1V9 767 aa8.92□□□□□ -0.98
DENND4A-205ENST00000562540 NPAS3Q8IXF0 933 aa8.92□□□□□ -0.98
DENND4A-205ENST00000562540 CD46P15529 392 aa8.9□□□□□ -0.98
DENND4A-205ENST00000562540 WNT7BP56706 349 aa8.9□□□□□ -0.98
DENND4A-205ENST00000562540 MAP2K5Q13163 448 aa8.9□□□□□ -0.98
DENND4A-205ENST00000562540 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.98
DENND4A-205ENST00000562540 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
DENND4A-205ENST00000562540 USB1Q9BQ65 265 aaKnown RBP8.89□□□□□ -0.99
DENND4A-205ENST00000562540 KDM2AQ9Y2K7 1162 aa8.88□□□□□ -0.99
DENND4A-205ENST00000562540 CAPN5O15484 640 aaPredicted RBP8.87□□□□□ -0.99
DENND4A-205ENST00000562540 KDM4AO75164 1064 aa8.87□□□□□ -0.99
DENND4A-205ENST00000562540 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
DENND4A-205ENST00000562540 SIAH2O43255 324 aa8.86□□□□□ -0.99
DENND4A-205ENST00000562540 IRF6O14896 467 aa8.85□□□□□ -0.99
DENND4A-205ENST00000562540 USP46P62068 366 aa8.85□□□□□ -0.99
DENND4A-205ENST00000562540 HLA-CQ95604 372 aa8.85□□□□□ -0.99
DENND4A-205ENST00000562540 ZFP42Q96MM3 310 aa8.83□□□□□ -1
DENND4A-205ENST00000562540 MINK1Q8N4C8 1332 aaPredicted RBP8.82□□□□□ -1
DENND4A-205ENST00000562540 CCDC102AQ96A19 550 aa8.82□□□□□ -1
DENND4A-205ENST00000562540 WASF2Q9Y6W5 498 aa8.82□□□□□ -1
DENND4A-205ENST00000562540 HOXA2O43364 376 aa8.81□□□□□ -1
DENND4A-205ENST00000562540 EHBP1Q8NDI1 1231 aa8.81□□□□□ -1
DENND4A-205ENST00000562540 GSK3AP49840 483 aa8.8□□□□□ -1
DENND4A-205ENST00000562540 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
DENND4A-205ENST00000562540 KCTD17Q8N5Z5 321 aa8.8□□□□□ -1
DENND4A-205ENST00000562540 GPCPD1Q9NPB8 672 aa8.79□□□□□ -1
DENND4A-205ENST00000562540 JUNDP17535 347 aa8.78□□□□□ -1
DENND4A-205ENST00000562540 CLCN1P35523 988 aa8.78□□□□□ -1
DENND4A-205ENST00000562540 GUCA2AQ02747 115 aa8.78□□□□□ -1
DENND4A-205ENST00000562540 SOBPA7XYQ1 873 aa8.77□□□□□ -1.01
DENND4A-205ENST00000562540 KCNMA1Q12791 1236 aa8.77□□□□□ -1.01
DENND4A-205ENST00000562540 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
DENND4A-205ENST00000562540 VSIG8P0DPA2 414 aa8.76□□□□□ -1.01
DENND4A-205ENST00000562540 VSIG10Q8N0Z9 540 aa8.76□□□□□ -1.01
DENND4A-205ENST00000562540 KRI1Q8N9T8 703 aaKnown RBP8.76□□□□□ -1.01
DENND4A-205ENST00000562540 SYMPKQ92797 1274 aaKnown RBP8.76□□□□□ -1.01
DENND4A-205ENST00000562540 SH3BP2P78314 561 aa8.75□□□□□ -1.01
DENND4A-205ENST00000562540 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
DENND4A-205ENST00000562540 TLL2Q9Y6L7 1015 aa8.75□□□□□ -1.01
DENND4A-205ENST00000562540 NUDT12Q9BQG2 462 aa8.74□□□□□ -1.01
DENND4A-205ENST00000562540 MRPL14Q6P1L8 145 aaKnown RBP8.73□□□□□ -1.01
DENND4A-205ENST00000562540 RETREG3Q86VR2 466 aa8.73□□□□□ -1.01
DENND4A-205ENST00000562540 PURBQ96QR8 312 aaKnown RBP8.73□□□□□ -1.01
DENND4A-205ENST00000562540 C6orf229H3BNL8 230 aa8.7□□□□□ -1.02
DENND4A-205ENST00000562540 FDX1P10109 184 aa8.7□□□□□ -1.02
DENND4A-205ENST00000562540 NNTQ13423 1086 aa8.7□□□□□ -1.02
DENND4A-205ENST00000562540 TIMP2P16035 220 aa8.69□□□□□ -1.02
DENND4A-205ENST00000562540 SCARF1Q14162 830 aa8.69□□□□□ -1.02
DENND4A-205ENST00000562540 LINC01559Q495D7 138 aa8.69□□□□□ -1.02
DENND4A-205ENST00000562540 MS4A1P11836 297 aa8.67□□□□□ -1.02
DENND4A-205ENST00000562540 RASSF7Q02833 373 aa8.67□□□□□ -1.02
DENND4A-205ENST00000562540 TMEM151AQ8N4L1 468 aa8.67□□□□□ -1.02
DENND4A-205ENST00000562540 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
DENND4A-205ENST00000562540 GDF11O95390 407 aa8.66□□□□□ -1.02
DENND4A-205ENST00000562540 CCNYL3P0C7X3 344 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms