RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 ORAI2Q96SN7 254 aa15.49■□□□□ 0.07
BBS4-205ENST00000562219 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
BBS4-205ENST00000562219 PXDNQ92626 1479 aa15.47■□□□□ 0.07
BBS4-205ENST00000562219 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
BBS4-205ENST00000562219 FMN2Q9NZ56 1722 aa15.47■□□□□ 0.07
BBS4-205ENST00000562219 MYOM2P54296 1465 aa15.46■□□□□ 0.07
BBS4-205ENST00000562219 TECPR2O15040 1411 aa15.46■□□□□ 0.07
BBS4-205ENST00000562219 KIF1AQ12756 1690 aa15.46■□□□□ 0.07
BBS4-205ENST00000562219 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
BBS4-205ENST00000562219 USP21Q9UK80 565 aa15.45■□□□□ 0.06
BBS4-205ENST00000562219 NPHP3Q7Z494 1330 aa15.44■□□□□ 0.06
BBS4-205ENST00000562219 ATAD2Q6PL18 1390 aa15.44■□□□□ 0.06
BBS4-205ENST00000562219 EP400Q96L91 3159 aa15.44■□□□□ 0.06
BBS4-205ENST00000562219 RGPD8O14715 1765 aaPredicted RBP15.44■□□□□ 0.06
BBS4-205ENST00000562219 ATRNO75882 1429 aa15.43■□□□□ 0.06
BBS4-205ENST00000562219 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
BBS4-205ENST00000562219 FNBP4Q8N3X1 1017 aaPredicted RBP15.43■□□□□ 0.06
BBS4-205ENST00000562219 TRPC5Q9UL62 973 aaPredicted RBP15.43■□□□□ 0.06
BBS4-205ENST00000562219 ANKRD30BQ9BXX2 1392 aa15.42■□□□□ 0.06
BBS4-205ENST00000562219 FOXD1Q16676 465 aa15.41■□□□□ 0.06
BBS4-205ENST00000562219 ESCO1Q5FWF5 840 aa15.41■□□□□ 0.06
BBS4-205ENST00000562219 PIK3C2GO75747 1445 aa15.41■□□□□ 0.06
BBS4-205ENST00000562219 ADGRF5Q8IZF2 1346 aa15.41■□□□□ 0.06
BBS4-205ENST00000562219 LRPPRCP42704 1394 aaKnown RBP15.4■□□□□ 0.06
BBS4-205ENST00000562219 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
BBS4-205ENST00000562219 USP32Q8NFA0 1604 aa15.39■□□□□ 0.05
BBS4-205ENST00000562219 ABCC11Q96J66 1382 aa15.38■□□□□ 0.05
BBS4-205ENST00000562219 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
BBS4-205ENST00000562219 FOXO3O43524 673 aa15.37■□□□□ 0.05
BBS4-205ENST00000562219 XPCQ01831 940 aaPredicted RBP15.37■□□□□ 0.05
BBS4-205ENST00000562219 STK26Q9P289 416 aa15.37■□□□□ 0.05
BBS4-205ENST00000562219 BRWD3Q6RI45 1802 aa15.37■□□□□ 0.05
BBS4-205ENST00000562219 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
BBS4-205ENST00000562219 YTHDC2Q9H6S0 1430 aaKnown RBP15.36■□□□□ 0.05
BBS4-205ENST00000562219 PLCH1Q4KWH8 1693 aa15.36■□□□□ 0.05
BBS4-205ENST00000562219 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
BBS4-205ENST00000562219 WAPLQ7Z5K2 1190 aa15.36■□□□□ 0.05
BBS4-205ENST00000562219 NWD2Q9ULI1 1742 aa15.35■□□□□ 0.05
BBS4-205ENST00000562219 GLI3P10071 1580 aa15.35■□□□□ 0.05
BBS4-205ENST00000562219 NUTM2FA1L443 756 aa15.34■□□□□ 0.05
BBS4-205ENST00000562219 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
BBS4-205ENST00000562219 MPHOSPH9Q99550 1183 aa15.34■□□□□ 0.05
BBS4-205ENST00000562219 NRXN1Q9ULB1 1477 aa15.33■□□□□ 0.05
BBS4-205ENST00000562219 SLIT2O94813 1529 aa15.33■□□□□ 0.05
BBS4-205ENST00000562219 SRCAPQ6ZRS2 3230 aa15.33■□□□□ 0.04
BBS4-205ENST00000562219 GJD4Q96KN9 370 aaPredicted RBP15.32■□□□□ 0.04
BBS4-205ENST00000562219 SPATA31A3Q5VYP0 1347 aa15.32■□□□□ 0.04
BBS4-205ENST00000562219 TNS3Q68CZ2 1445 aa15.31■□□□□ 0.04
BBS4-205ENST00000562219 RALGAPBQ86X10 1494 aa15.31■□□□□ 0.04
BBS4-205ENST00000562219 ADGRB2O60241 1585 aa15.3■□□□□ 0.04
BBS4-205ENST00000562219 CCDC125Q86Z20 511 aa15.29■□□□□ 0.04
BBS4-205ENST00000562219 UNC5CLQ8IV45 518 aa15.29■□□□□ 0.04
BBS4-205ENST00000562219 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
BBS4-205ENST00000562219 TRPM3Q9HCF6 1732 aaPredicted RBP15.29■□□□□ 0.04
BBS4-205ENST00000562219 DLC1Q96QB1 1528 aa15.28■□□□□ 0.04
BBS4-205ENST00000562219 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
BBS4-205ENST00000562219 C14orf93Q9H972 538 aaKnown RBP15.28■□□□□ 0.04
BBS4-205ENST00000562219 DHX57Q6P158 1386 aaKnown RBP15.27■□□□□ 0.04
BBS4-205ENST00000562219 NRAPQ86VF7 1730 aa15.27■□□□□ 0.04
BBS4-205ENST00000562219 KRT28Q7Z3Y7 464 aa15.27■□□□□ 0.04
BBS4-205ENST00000562219 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
BBS4-205ENST00000562219 ALS2Q96Q42 1657 aa15.26■□□□□ 0.03
BBS4-205ENST00000562219 PHF8Q9UPP1 1060 aa15.26■□□□□ 0.03
BBS4-205ENST00000562219 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
BBS4-205ENST00000562219 SBNO1A3KN83 1393 aa15.25■□□□□ 0.03
BBS4-205ENST00000562219 ANKARQ7Z5J8 1434 aa15.25■□□□□ 0.03
BBS4-205ENST00000562219 ARHGEF10O15013 1369 aa15.24■□□□□ 0.03
BBS4-205ENST00000562219 ADGRB1O14514 1584 aa15.24■□□□□ 0.03
BBS4-205ENST00000562219 CRYBG1Q9Y4K1 1723 aa15.24■□□□□ 0.03
BBS4-205ENST00000562219 HAP1P54257 671 aaPredicted RBP15.24■□□□□ 0.03
BBS4-205ENST00000562219 PSME1Q06323 249 aa15.24■□□□□ 0.03
BBS4-205ENST00000562219 ITSN1Q15811 1721 aa15.23■□□□□ 0.03
BBS4-205ENST00000562219 CFAP70Q5T0N1 1121 aa15.23■□□□□ 0.03
BBS4-205ENST00000562219 PRAM1Q96QH2 718 aa15.23■□□□□ 0.03
BBS4-205ENST00000562219 COL14A1Q05707 1796 aaKnown RBP15.23■□□□□ 0.03
BBS4-205ENST00000562219 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
BBS4-205ENST00000562219 VPS72Q15906 364 aa15.21■□□□□ 0.03
BBS4-205ENST00000562219 CABLES1Q8TDN4 633 aa15.21■□□□□ 0.03
BBS4-205ENST00000562219 ARHGEF28Q8N1W1 1705 aaKnown RBP15.2■□□□□ 0.02
BBS4-205ENST00000562219 TULP4Q9NRJ4 1543 aa15.2■□□□□ 0.02
BBS4-205ENST00000562219 LRP5O75197 1615 aa15.19■□□□□ 0.02
BBS4-205ENST00000562219 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
BBS4-205ENST00000562219 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
BBS4-205ENST00000562219 POGKQ9P215 609 aa15.19■□□□□ 0.02
BBS4-205ENST00000562219 RGPD1P0DJD0 1748 aa15.19■□□□□ 0.02
BBS4-205ENST00000562219 EIF3AQ14152 1382 aaKnown RBP15.19■□□□□ 0.02
BBS4-205ENST00000562219 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
BBS4-205ENST00000562219 RAB3GAP2Q9H2M9 1393 aa15.17■□□□□ 0.02
BBS4-205ENST00000562219 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
BBS4-205ENST00000562219 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
BBS4-205ENST00000562219 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
BBS4-205ENST00000562219 PMFBP1Q8TBY8 1022 aa15.16■□□□□ 0.02
BBS4-205ENST00000562219 GPRASP1Q5JY77 1395 aa15.15■□□□□ 0.02
BBS4-205ENST00000562219 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
BBS4-205ENST00000562219 KRT27Q7Z3Y8 459 aa15.15■□□□□ 0.02
BBS4-205ENST00000562219 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
BBS4-205ENST00000562219 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
BBS4-205ENST00000562219 TNS1Q9HBL0 1735 aaKnown RBP15.14■□□□□ 0.01
BBS4-205ENST00000562219 FAM83GA6ND36 823 aa15.14■□□□□ 0.01
BBS4-205ENST00000562219 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms