RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 HIC1Q14526 733 aa7.74□□□□□ -1.17
CAPN3-211ENST00000562199 KMT5BQ4FZB7 885 aa7.74□□□□□ -1.17
CAPN3-211ENST00000562199 PXYLP1Q8TE99 480 aa7.74□□□□□ -1.17
CAPN3-211ENST00000562199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.73□□□□□ -1.17
CAPN3-211ENST00000562199 NCLP19338 710 aaKnown RBP7.73□□□□□ -1.17
CAPN3-211ENST00000562199 TMED8Q6PL24 325 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-211ENST00000562199 ACTN4O43707 911 aaKnown RBP7.72□□□□□ -1.17
CAPN3-211ENST00000562199 FAM177A1Q8N128 213 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-211ENST00000562199 NLRP7Q8WX94 980 aa7.72□□□□□ -1.17
CAPN3-211ENST00000562199 CWC22Q9HCG8 908 aaKnown RBP7.72□□□□□ -1.17
CAPN3-211ENST00000562199 MTMR7Q9Y216 660 aa7.72□□□□□ -1.17
CAPN3-211ENST00000562199 V9GY48 417 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-211ENST00000562199 PPEF1O14829 653 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-211ENST00000562199 GNPATO15228 680 aa7.71□□□□□ -1.18
CAPN3-211ENST00000562199 RBM10P98175 930 aaKnown RBP7.71□□□□□ -1.18
CAPN3-211ENST00000562199 METTL3Q86U44 580 aaKnown RBP7.71□□□□□ -1.18
CAPN3-211ENST00000562199 ZNF428Q96B54 188 aa7.71□□□□□ -1.18
CAPN3-211ENST00000562199 RNF223E7ERA6 249 aa7.7□□□□□ -1.18
CAPN3-211ENST00000562199 RBM25P49756 843 aaKnown RBP7.7□□□□□ -1.18
CAPN3-211ENST00000562199 LAPTM4AQ15012 233 aa7.7□□□□□ -1.18
CAPN3-211ENST00000562199 PUS10Q3MIT2 529 aaKnown RBP7.7□□□□□ -1.18
CAPN3-211ENST00000562199 TMUB1Q9BVT8 246 aa7.7□□□□□ -1.18
CAPN3-211ENST00000562199 GPR37O15354 613 aa7.68□□□□□ -1.18
CAPN3-211ENST00000562199 S1PR4O95977 384 aa7.68□□□□□ -1.18
CAPN3-211ENST00000562199 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
CAPN3-211ENST00000562199 RDH13Q8NBN7 331 aa7.68□□□□□ -1.18
CAPN3-211ENST00000562199 PDZRN3Q9UPQ7 1066 aa7.68□□□□□ -1.18
CAPN3-211ENST00000562199 ARID4BQ4LE39 1312 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-211ENST00000562199 DDX11L8A8MPP1 907 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 LCE2BO14633 110 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 NR1I2O75469 434 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 SLC19A1P41440 591 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 TEX2Q8IWB9 1127 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 SCUBE3Q8IX30 993 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 PRDM16Q9HAZ2 1276 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 USP35Q9P2H5 1018 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 RB1CC1Q8TDY2 1594 aa7.67□□□□□ -1.18
CAPN3-211ENST00000562199 NRG2O14511 850 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-211ENST00000562199 SETQ01105 290 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-211ENST00000562199 FOXD4L5Q5VV16 416 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-211ENST00000562199 GPIHBP1Q8IV16 184 aa7.66□□□□□ -1.18
CAPN3-211ENST00000562199 FOXD4L4Q8WXT5 416 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-211ENST00000562199 EMID1Q96A84 441 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-211ENST00000562199 RSF1Q96T23 1441 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-211ENST00000562199 PHOX2BQ99453 314 aa7.65□□□□□ -1.18
CAPN3-211ENST00000562199 PLCD4Q9BRC7 762 aa7.65□□□□□ -1.18
CAPN3-211ENST00000562199 ADH1BP00325 375 aa7.64□□□□□ -1.19
CAPN3-211ENST00000562199 GLIPR1L2Q4G1C9 344 aa7.64□□□□□ -1.19
CAPN3-211ENST00000562199 SLC6A16Q9GZN6 736 aa7.64□□□□□ -1.19
CAPN3-211ENST00000562199 PPM1GO15355 546 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-211ENST00000562199 FUT2Q10981 343 aa7.62□□□□□ -1.19
CAPN3-211ENST00000562199 LIAT1Q6ZQX7 453 aa7.62□□□□□ -1.19
CAPN3-211ENST00000562199 ANKLE1Q8NAG6 615 aa7.62□□□□□ -1.19
CAPN3-211ENST00000562199 SPSB2Q99619 263 aa7.62□□□□□ -1.19
CAPN3-211ENST00000562199 CCDC27Q2M243 656 aa7.61□□□□□ -1.19
CAPN3-211ENST00000562199 SPRYD7Q5W111 196 aa7.61□□□□□ -1.19
CAPN3-211ENST00000562199 CNPY4Q8N129 248 aa7.61□□□□□ -1.19
CAPN3-211ENST00000562199 PRDM10Q9NQV6 1147 aa7.61□□□□□ -1.19
CAPN3-211ENST00000562199 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-211ENST00000562199 ARID3CA6NKF2 412 aa7.6□□□□□ -1.19
CAPN3-211ENST00000562199 PTMSP20962 102 aa7.6□□□□□ -1.19
CAPN3-211ENST00000562199 PLA2G2CQ5R387 149 aa7.6□□□□□ -1.19
CAPN3-211ENST00000562199 TRIM67Q6ZTA4 783 aa7.6□□□□□ -1.19
CAPN3-211ENST00000562199 SCRIBQ14160 1630 aa7.6□□□□□ -1.19
CAPN3-211ENST00000562199 E9PSI1 815 aa7.59□□□□□ -1.19
CAPN3-211ENST00000562199 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
CAPN3-211ENST00000562199 GRIPAP1Q4V328 841 aa7.59□□□□□ -1.19
CAPN3-211ENST00000562199 MORN1Q5T089 497 aa7.59□□□□□ -1.19
CAPN3-211ENST00000562199 ZNF598Q86UK7 904 aaKnown RBP7.59□□□□□ -1.19
CAPN3-211ENST00000562199 ATP6V1AP38606 617 aa7.58□□□□□ -1.2
CAPN3-211ENST00000562199 GCGRP47871 477 aa7.58□□□□□ -1.2
CAPN3-211ENST00000562199 ZNF697Q5TEC3 545 aa7.58□□□□□ -1.2
CAPN3-211ENST00000562199 TMCO4Q5TGY1 634 aa7.58□□□□□ -1.2
CAPN3-211ENST00000562199 SULF1Q8IWU6 871 aa7.58□□□□□ -1.2
CAPN3-211ENST00000562199 ZNF526Q8TF50 670 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-211ENST00000562199 SLC27A5Q9Y2P5 690 aa7.58□□□□□ -1.2
CAPN3-211ENST00000562199 TNFRSF10AO00220 468 aa7.57□□□□□ -1.2
CAPN3-211ENST00000562199 MAFGO15525 162 aa7.57□□□□□ -1.2
CAPN3-211ENST00000562199 MCCP23508 829 aa7.57□□□□□ -1.2
CAPN3-211ENST00000562199 MFAP1P55081 439 aaKnown RBP7.57□□□□□ -1.2
CAPN3-211ENST00000562199 NAP1L2Q9ULW6 460 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-211ENST00000562199 APBB1O00213 710 aa7.56□□□□□ -1.2
CAPN3-211ENST00000562199 EIF4G1Q04637 1599 aaKnown RBP7.55□□□□□ -1.2
CAPN3-211ENST00000562199 FMNL1O95466 1100 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-211ENST00000562199 DEKP35659 375 aaKnown RBP7.55□□□□□ -1.2
CAPN3-211ENST00000562199 FAM160A2Q8N612 972 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-211ENST00000562199 THAP11Q96EK4 314 aa7.55□□□□□ -1.2
CAPN3-211ENST00000562199 TRAIPQ9BWF2 469 aa7.55□□□□□ -1.2
CAPN3-211ENST00000562199 IRF6O14896 467 aa7.54□□□□□ -1.2
CAPN3-211ENST00000562199 ANAPC15P60006 121 aa7.54□□□□□ -1.2
CAPN3-211ENST00000562199 FOXC1Q12948 553 aa7.54□□□□□ -1.2
CAPN3-211ENST00000562199 PKDCCQ504Y2 493 aa7.54□□□□□ -1.2
CAPN3-211ENST00000562199 ZNF787Q6DD87 383 aa7.54□□□□□ -1.2
CAPN3-211ENST00000562199 IPO4Q8TEX9 1081 aaKnown RBP7.54□□□□□ -1.2
CAPN3-211ENST00000562199 PRDM9Q9NQV7 894 aa7.54□□□□□ -1.2
CAPN3-211ENST00000562199 FCF1Q9Y324 198 aaKnown RBP7.54□□□□□ -1.2
CAPN3-211ENST00000562199 MDM2Q00987 491 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-211ENST00000562199 MAP2K5Q13163 448 aa7.53□□□□□ -1.2
CAPN3-211ENST00000562199 RNF19BQ6ZMZ0 732 aa7.53□□□□□ -1.2
CAPN3-211ENST00000562199 CCDC125Q86Z20 511 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms