RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 HFM1A2PYH4 1435 aa30.64■■■□□ 2.49
PDXDC1-207ENST00000562119 KIF1BO60333 1816 aa30.63■■■□□ 2.49
PDXDC1-207ENST00000562119 FOXD1Q16676 465 aa30.63■■■□□ 2.49
PDXDC1-207ENST00000562119 PXDNQ92626 1479 aa30.62■■■□□ 2.49
PDXDC1-207ENST00000562119 ESCO1Q5FWF5 840 aa30.61■■■□□ 2.49
PDXDC1-207ENST00000562119 CCDC125Q86Z20 511 aa30.61■■■□□ 2.49
PDXDC1-207ENST00000562119 NPHP3Q7Z494 1330 aa30.61■■■□□ 2.49
PDXDC1-207ENST00000562119 XPCQ01831 940 aaPredicted RBP30.59■■■□□ 2.49
PDXDC1-207ENST00000562119 GJD4Q96KN9 370 aaPredicted RBP30.59■■■□□ 2.49
PDXDC1-207ENST00000562119 PPARGC1BQ86YN6 1023 aaKnown RBP30.58■■■□□ 2.49
PDXDC1-207ENST00000562119 FOXO3O43524 673 aa30.57■■■□□ 2.48
PDXDC1-207ENST00000562119 CDC42BPGQ6DT37 1551 aa30.56■■■□□ 2.48
PDXDC1-207ENST00000562119 RPGRIP1LQ68CZ1 1315 aa30.55■■■□□ 2.48
PDXDC1-207ENST00000562119 MARF1Q9Y4F3 1742 aaKnown RBP30.53■■■□□ 2.48
PDXDC1-207ENST00000562119 NAIPQ13075 1403 aa30.52■■■□□ 2.48
PDXDC1-207ENST00000562119 NUTM2FA1L443 756 aa30.48■■■□□ 2.47
PDXDC1-207ENST00000562119 RALGAPBQ86X10 1494 aa30.48■■■□□ 2.47
PDXDC1-207ENST00000562119 PPLO60437 1756 aa30.48■■■□□ 2.47
PDXDC1-207ENST00000562119 GLI3P10071 1580 aa30.47■■■□□ 2.47
PDXDC1-207ENST00000562119 UNC5CLQ8IV45 518 aa30.47■■■□□ 2.47
PDXDC1-207ENST00000562119 SLIT2O94813 1529 aa30.47■■■□□ 2.47
PDXDC1-207ENST00000562119 BLMP54132 1417 aaPredicted RBP30.47■■■□□ 2.47
PDXDC1-207ENST00000562119 LRPPRCP42704 1394 aaKnown RBP30.46■■■□□ 2.47
PDXDC1-207ENST00000562119 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.45■■■□□ 2.47
PDXDC1-207ENST00000562119 WAPLQ7Z5K2 1190 aa30.45■■■□□ 2.47
PDXDC1-207ENST00000562119 DEFB132Q7Z7B7 95 aa30.43■■■□□ 2.46
PDXDC1-207ENST00000562119 STK26Q9P289 416 aa30.42■■■□□ 2.46
PDXDC1-207ENST00000562119 SPATA31A3Q5VYP0 1347 aa30.42■■■□□ 2.46
PDXDC1-207ENST00000562119 ADGRF5Q8IZF2 1346 aa30.42■■■□□ 2.46
PDXDC1-207ENST00000562119 TECPR2O15040 1411 aa30.41■■■□□ 2.46
PDXDC1-207ENST00000562119 PLEKHH1Q9ULM0 1364 aa30.4■■■□□ 2.46
PDXDC1-207ENST00000562119 SLC4A1APQ9BWU0 796 aaKnown RBP30.39■■■□□ 2.46
PDXDC1-207ENST00000562119 RRBP1Q9P2E9 1410 aaKnown RBP30.36■■■□□ 2.45
PDXDC1-207ENST00000562119 USP32Q8NFA0 1604 aa30.36■■■□□ 2.45
PDXDC1-207ENST00000562119 SEPT12Q8IYM1 358 aa30.35■■■□□ 2.45
PDXDC1-207ENST00000562119 BRWD3Q6RI45 1802 aa30.35■■■□□ 2.45
PDXDC1-207ENST00000562119 ABCC11Q96J66 1382 aa30.34■■■□□ 2.45
PDXDC1-207ENST00000562119 CCDC144AA2RUR9 1427 aa30.33■■■□□ 2.45
PDXDC1-207ENST00000562119 TMEM132EQ6IEE7 984 aa30.33■■■□□ 2.45
PDXDC1-207ENST00000562119 KRT28Q7Z3Y7 464 aa30.33■■■□□ 2.45
PDXDC1-207ENST00000562119 FMN2Q9NZ56 1722 aa30.31■■■□□ 2.44
PDXDC1-207ENST00000562119 VPS72Q15906 364 aa30.31■■■□□ 2.44
PDXDC1-207ENST00000562119 SF3B2Q13435 895 aaKnown RBP30.3■■■□□ 2.44
PDXDC1-207ENST00000562119 CABLES1Q8TDN4 633 aa30.3■■■□□ 2.44
PDXDC1-207ENST00000562119 KIF1AQ12756 1690 aa30.3■■■□□ 2.44
PDXDC1-207ENST00000562119 ONECUT3O60422 494 aaPredicted RBP30.29■■■□□ 2.44
PDXDC1-207ENST00000562119 RGL3Q3MIN7 710 aa30.29■■■□□ 2.44
PDXDC1-207ENST00000562119 TNS3Q68CZ2 1445 aa30.27■■■□□ 2.44
PDXDC1-207ENST00000562119 SPATA31E1Q6ZUB1 1445 aa30.27■■■□□ 2.44
PDXDC1-207ENST00000562119 KNDC1Q76NI1 1749 aa30.27■■■□□ 2.44
PDXDC1-207ENST00000562119 HAP1P54257 671 aaPredicted RBP30.25■■■□□ 2.43
PDXDC1-207ENST00000562119 ANKRD30BQ9BXX2 1392 aa30.25■■■□□ 2.43
PDXDC1-207ENST00000562119 LRP5O75197 1615 aa30.25■■■□□ 2.43
PDXDC1-207ENST00000562119 PLEKHG5O94827 1062 aa30.24■■■□□ 2.43
PDXDC1-207ENST00000562119 KRT27Q7Z3Y8 459 aa30.24■■■□□ 2.43
PDXDC1-207ENST00000562119 PIK3C2GO75747 1445 aa30.23■■■□□ 2.43
PDXDC1-207ENST00000562119 YTHDC2Q9H6S0 1430 aaKnown RBP30.23■■■□□ 2.43
PDXDC1-207ENST00000562119 PHF8Q9UPP1 1060 aa30.23■■■□□ 2.43
PDXDC1-207ENST00000562119 CCDC9Q9Y3X0 531 aaKnown RBP30.23■■■□□ 2.43
PDXDC1-207ENST00000562119 PLCH1Q4KWH8 1693 aa30.22■■■□□ 2.43
PDXDC1-207ENST00000562119 IFT172Q9UG01 1749 aa30.21■■■□□ 2.43
PDXDC1-207ENST00000562119 PSME1Q06323 249 aa30.2■■■□□ 2.43
PDXDC1-207ENST00000562119 NWD2Q9ULI1 1742 aa30.19■■■□□ 2.42
PDXDC1-207ENST00000562119 PSDA5PKW4 1024 aaPredicted RBP30.19■■■□□ 2.42
PDXDC1-207ENST00000562119 SIRT1Q96EB6 747 aa30.18■■■□□ 2.42
PDXDC1-207ENST00000562119 SBNO1A3KN83 1393 aa30.17■■■□□ 2.42
PDXDC1-207ENST00000562119 FAM83GA6ND36 823 aa30.17■■■□□ 2.42
PDXDC1-207ENST00000562119 RGPD8O14715 1765 aaPredicted RBP30.16■■■□□ 2.42
PDXDC1-207ENST00000562119 LMOD2Q6P5Q4 547 aa30.16■■■□□ 2.42
PDXDC1-207ENST00000562119 NRXN1Q9ULB1 1477 aa30.16■■■□□ 2.42
PDXDC1-207ENST00000562119 ABCA3Q99758 1704 aa30.16■■■□□ 2.42
PDXDC1-207ENST00000562119 HRCP23327 699 aa30.15■■■□□ 2.42
PDXDC1-207ENST00000562119 ARHGEF10O15013 1369 aa30.14■■■□□ 2.41
PDXDC1-207ENST00000562119 BAG6P46379 1132 aa30.13■■■□□ 2.41
PDXDC1-207ENST00000562119 A0A0G2JS52 829 aa30.11■■■□□ 2.41
PDXDC1-207ENST00000562119 MYT1Q01538 1121 aa30.11■■■□□ 2.41
PDXDC1-207ENST00000562119 FAM98CQ17RN3 349 aaKnown RBP30.11■■■□□ 2.41
PDXDC1-207ENST00000562119 C14orf93Q9H972 538 aaKnown RBP30.11■■■□□ 2.41
PDXDC1-207ENST00000562119 SAFB2Q14151 953 aaKnown RBP eCLIP30.08■■■□□ 2.41
PDXDC1-207ENST00000562119 NRAPQ86VF7 1730 aa30.08■■■□□ 2.41
PDXDC1-207ENST00000562119 PMFBP1Q8TBY8 1022 aa30.07■■■□□ 2.4
PDXDC1-207ENST00000562119 PRAM1Q96QH2 718 aa30.07■■■□□ 2.4
PDXDC1-207ENST00000562119 MPHOSPH9Q99550 1183 aa30.07■■■□□ 2.4
PDXDC1-207ENST00000562119 BTG4Q9NY30 223 aa30.07■■■□□ 2.4
PDXDC1-207ENST00000562119 EN1Q05925 392 aaPredicted RBP30.06■■■□□ 2.4
PDXDC1-207ENST00000562119 CFAP70Q5T0N1 1121 aa30.06■■■□□ 2.4
PDXDC1-207ENST00000562119 FAM182BQ5T319 152 aa30.05■■■□□ 2.4
PDXDC1-207ENST00000562119 DHX57Q6P158 1386 aaKnown RBP30.04■■■□□ 2.4
PDXDC1-207ENST00000562119 ANKARQ7Z5J8 1434 aa30.01■■■□□ 2.39
PDXDC1-207ENST00000562119 R3HDM1Q15032 1099 aaKnown RBP30■■■□□ 2.39
PDXDC1-207ENST00000562119 TRPM3Q9HCF6 1732 aaPredicted RBP29.99■■■□□ 2.39
PDXDC1-207ENST00000562119 SPATA31A5Q5VU36 1347 aa29.97■■■□□ 2.39
PDXDC1-207ENST00000562119 SPATA31A7Q8IWB4 1347 aa29.97■■■□□ 2.39
PDXDC1-207ENST00000562119 RGPD1P0DJD0 1748 aa29.96■■■□□ 2.39
PDXDC1-207ENST00000562119 COL14A1Q05707 1796 aaKnown RBP29.96■■■□□ 2.39
PDXDC1-207ENST00000562119 POGKQ9P215 609 aa29.96■■■□□ 2.39
PDXDC1-207ENST00000562119 DISP2A7MBM2 1401 aa29.96■■■□□ 2.39
PDXDC1-207ENST00000562119 ALS2Q96Q42 1657 aa29.95■■■□□ 2.38
PDXDC1-207ENST00000562119 DLC1Q96QB1 1528 aa29.94■■■□□ 2.38
PDXDC1-207ENST00000562119 ADGRB2O60241 1585 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms