RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 DHX57Q6P158 1386 aaKnown RBP37.25■■■■□ 3.55
MSLN-203ENST00000561896 CFAP70Q5T0N1 1121 aa37.24■■■■□ 3.55
MSLN-203ENST00000561896 LRRC59Q96AG4 307 aaKnown RBP37.24■■■■□ 3.55
MSLN-203ENST00000561896 WAPLQ7Z5K2 1190 aa37.23■■■■□ 3.55
MSLN-203ENST00000561896 LRP6O75581 1613 aa37.18■■■■□ 3.54
MSLN-203ENST00000561896 ORAI2Q96SN7 254 aa37.18■■■■□ 3.54
MSLN-203ENST00000561896 PLEKHH1Q9ULM0 1364 aa37.17■■■■□ 3.54
MSLN-203ENST00000561896 DCAF11Q8TEB1 546 aa37.17■■■■□ 3.54
MSLN-203ENST00000561896 DLC1Q96QB1 1528 aa37.15■■■■□ 3.54
MSLN-203ENST00000561896 SOS2Q07890 1332 aaPredicted RBP37.14■■■■□ 3.54
MSLN-203ENST00000561896 ADGRB1O14514 1584 aa37.14■■■■□ 3.54
MSLN-203ENST00000561896 DDX17Q92841 729 aaKnown RBP37.14■■■■□ 3.54
MSLN-203ENST00000561896 FMN2Q9NZ56 1722 aa37.1■■■■□ 3.53
MSLN-203ENST00000561896 KDM2AQ9Y2K7 1162 aa37.1■■■■□ 3.53
MSLN-203ENST00000561896 PNPLA6Q8IY17 1366 aa37.09■■■■□ 3.53
MSLN-203ENST00000561896 ESCO1Q5FWF5 840 aa37.08■■■■□ 3.53
MSLN-203ENST00000561896 MEX3CQ5U5Q3 659 aaKnown RBP37.08■■■■□ 3.53
MSLN-203ENST00000561896 POTEAQ6S8J7 498 aa37.08■■■■□ 3.53
MSLN-203ENST00000561896 NPHP3Q7Z494 1330 aa37.07■■■■□ 3.52
MSLN-203ENST00000561896 PRAM1Q96QH2 718 aa37.04■■■■□ 3.52
MSLN-203ENST00000561896 ZNF772Q68DY9 489 aaPredicted RBP37.01■■■■□ 3.52
MSLN-203ENST00000561896 NUTM2BA6NNL0 878 aaPredicted RBP37■■■■□ 3.51
MSLN-203ENST00000561896 NUTM2EB1AL46 878 aaPredicted RBP37■■■■□ 3.51
MSLN-203ENST00000561896 NUTM2AQ8IVF1 878 aaPredicted RBP37■■■■□ 3.51
MSLN-203ENST00000561896 KIF1AQ12756 1690 aa36.99■■■■□ 3.51
MSLN-203ENST00000561896 POGKQ9P215 609 aa36.99■■■■□ 3.51
MSLN-203ENST00000561896 PXDNQ92626 1479 aa36.99■■■■□ 3.51
MSLN-203ENST00000561896 ADGRB2O60241 1585 aa36.98■■■■□ 3.51
MSLN-203ENST00000561896 NUTM2FA1L443 756 aa36.96■■■■□ 3.51
MSLN-203ENST00000561896 COL22A1Q8NFW1 1626 aaPredicted RBP36.96■■■■□ 3.51
MSLN-203ENST00000561896 FOXO3O43524 673 aa36.95■■■■□ 3.51
MSLN-203ENST00000561896 TRAK1Q9UPV9 953 aa36.95■■■■□ 3.51
MSLN-203ENST00000561896 KIAA1210Q9ULL0 1709 aa36.95■■■■□ 3.51
MSLN-203ENST00000561896 RGPD8O14715 1765 aaPredicted RBP36.93■■■■□ 3.5
MSLN-203ENST00000561896 SAFB2Q14151 953 aaKnown RBP eCLIP36.92■■■■□ 3.5
MSLN-203ENST00000561896 ANKARQ7Z5J8 1434 aa36.9■■■■□ 3.5
MSLN-203ENST00000561896 ARHGEF28Q8N1W1 1705 aaKnown RBP36.86■■■■□ 3.49
MSLN-203ENST00000561896 PHF8Q9UPP1 1060 aa36.85■■■■□ 3.49
MSLN-203ENST00000561896 EIF3AQ14152 1382 aaKnown RBP36.85■■■■□ 3.49
MSLN-203ENST00000561896 AFF2P51816 1311 aa36.85■■■■□ 3.49
MSLN-203ENST00000561896 USP32Q8NFA0 1604 aa36.82■■■■□ 3.49
MSLN-203ENST00000561896 XPCQ01831 940 aaPredicted RBP36.82■■■■□ 3.48
MSLN-203ENST00000561896 C8orf37Q96NL8 207 aa36.82■■■■□ 3.48
MSLN-203ENST00000561896 SPATA31A3Q5VYP0 1347 aa36.79■■■■□ 3.48
MSLN-203ENST00000561896 ADAMTS2O95450 1211 aa36.78■■■■□ 3.48
MSLN-203ENST00000561896 KRT28Q7Z3Y7 464 aa36.78■■■■□ 3.48
MSLN-203ENST00000561896 MINK1Q8N4C8 1332 aaPredicted RBP36.78■■■■□ 3.48
MSLN-203ENST00000561896 TULP4Q9NRJ4 1543 aa36.77■■■■□ 3.48
MSLN-203ENST00000561896 WASLO00401 505 aaPredicted RBP36.77■■■■□ 3.48
MSLN-203ENST00000561896 PSME1Q06323 249 aa36.77■■■■□ 3.48
MSLN-203ENST00000561896 NGLY1Q96IV0 654 aa36.76■■■■□ 3.48
MSLN-203ENST00000561896 HIRIP3Q9BW71 556 aaPredicted RBP36.76■■■■□ 3.48
MSLN-203ENST00000561896 RXRBP28702 533 aa36.75■■■■□ 3.47
MSLN-203ENST00000561896 CDK12Q9NYV4 1490 aaPredicted RBP36.74■■■■□ 3.47
MSLN-203ENST00000561896 MARF1Q9Y4F3 1742 aaKnown RBP36.73■■■■□ 3.47
MSLN-203ENST00000561896 SBNO1A3KN83 1393 aa36.73■■■■□ 3.47
MSLN-203ENST00000561896 L3MBTL2Q969R5 705 aa36.72■■■■□ 3.47
MSLN-203ENST00000561896 TNS3Q68CZ2 1445 aa36.71■■■■□ 3.47
MSLN-203ENST00000561896 FNBP4Q8N3X1 1017 aaPredicted RBP36.7■■■■□ 3.47
MSLN-203ENST00000561896 NBPF1Q3BBV0 1214 aa36.69■■■■□ 3.46
MSLN-203ENST00000561896 SIN3AQ96ST3 1273 aa36.69■■■■□ 3.46
MSLN-203ENST00000561896 PRR36Q9H6K5 1346 aa36.68■■■■□ 3.46
MSLN-203ENST00000561896 QTRT2Q9H974 415 aaKnown RBP36.68■■■■□ 3.46
MSLN-203ENST00000561896 PMFBP1Q8TBY8 1022 aa36.66■■■■□ 3.46
MSLN-203ENST00000561896 ITSN1Q15811 1721 aa36.65■■■■□ 3.46
MSLN-203ENST00000561896 ARHGEF10O15013 1369 aa36.65■■■■□ 3.46
MSLN-203ENST00000561896 RBM6P78332 1123 aaKnown RBP36.64■■■■□ 3.46
MSLN-203ENST00000561896 TRIM26Q12899 539 aaPredicted RBP36.64■■■■□ 3.46
MSLN-203ENST00000561896 USP21Q9UK80 565 aa36.63■■■■□ 3.45
MSLN-203ENST00000561896 GPRASP1Q5JY77 1395 aa36.61■■■■□ 3.45
MSLN-203ENST00000561896 ATP7BP35670 1465 aa36.61■■■■□ 3.45
MSLN-203ENST00000561896 TRPM3Q9HCF6 1732 aaPredicted RBP36.6■■■■□ 3.45
MSLN-203ENST00000561896 NEUROD1Q13562 356 aa36.6■■■■□ 3.45
MSLN-203ENST00000561896 TRPC5Q9UL62 973 aaPredicted RBP36.59■■■■□ 3.45
MSLN-203ENST00000561896 TRPM1Q7Z4N2 1603 aa36.58■■■■□ 3.45
MSLN-203ENST00000561896 NUDT16Q96DE0 195 aaKnown RBP36.57■■■■□ 3.44
MSLN-203ENST00000561896 CDK19Q9BWU1 502 aa36.57■■■■□ 3.44
MSLN-203ENST00000561896 ATRNO75882 1429 aa36.55■■■■□ 3.44
MSLN-203ENST00000561896 BCL9LQ86UU0 1499 aa36.55■■■■□ 3.44
MSLN-203ENST00000561896 CENPJQ9HC77 1338 aaPredicted RBP36.55■■■■□ 3.44
MSLN-203ENST00000561896 ALS2Q96Q42 1657 aa36.54■■■■□ 3.44
MSLN-203ENST00000561896 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.54■■■■□ 3.44
MSLN-203ENST00000561896 NGDNQ8NEJ9 315 aaKnown RBP36.53■■■■□ 3.44
MSLN-203ENST00000561896 ABCA3Q99758 1704 aa36.53■■■■□ 3.44
MSLN-203ENST00000561896 TOPAZ1Q8N9V7 1692 aa36.52■■■■□ 3.44
MSLN-203ENST00000561896 CCDC61Q9Y6R9 512 aa36.51■■■■□ 3.44
MSLN-203ENST00000561896 SLIT2O94813 1529 aa36.5■■■■□ 3.43
MSLN-203ENST00000561896 LMOD2Q6P5Q4 547 aa36.5■■■■□ 3.43
MSLN-203ENST00000561896 RGS12O14924 1447 aa36.5■■■■□ 3.43
MSLN-203ENST00000561896 QRICH2Q9H0J4 1663 aa36.48■■■■□ 3.43
MSLN-203ENST00000561896 HAP1P54257 671 aaPredicted RBP36.48■■■■□ 3.43
MSLN-203ENST00000561896 POLR3AO14802 1390 aaPredicted RBP36.46■■■■□ 3.43
MSLN-203ENST00000561896 CABLES1Q8TDN4 633 aa36.46■■■■□ 3.43
MSLN-203ENST00000561896 ROCK2O75116 1388 aaKnown RBP36.45■■■■□ 3.43
MSLN-203ENST00000561896 PLEKHG3A1L390 1219 aa36.45■■■■□ 3.43
MSLN-203ENST00000561896 UNC5CLQ8IV45 518 aa36.44■■■■□ 3.42
MSLN-203ENST00000561896 NWD2Q9ULI1 1742 aa36.42■■■■□ 3.42
MSLN-203ENST00000561896 UPF1Q92900 1129 aaKnown RBP eCLIP36.4■■■■□ 3.42
MSLN-203ENST00000561896 GJD4Q96KN9 370 aaPredicted RBP36.39■■■■□ 3.42
MSLN-203ENST00000561896 ACEP12821 1306 aa36.38■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms