RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 DDX17Q92841 729 aaKnown RBP34.51■■■■□ 3.12
TMEM170A-202ENST00000561878 YTHDC2Q9H6S0 1430 aaKnown RBP34.5■■■■□ 3.11
TMEM170A-202ENST00000561878 NUTM2BA6NNL0 878 aaPredicted RBP34.49■■■■□ 3.11
TMEM170A-202ENST00000561878 NUTM2EB1AL46 878 aaPredicted RBP34.49■■■■□ 3.11
TMEM170A-202ENST00000561878 NUTM2AQ8IVF1 878 aaPredicted RBP34.49■■■■□ 3.11
TMEM170A-202ENST00000561878 ORAI2Q96SN7 254 aa34.49■■■■□ 3.11
TMEM170A-202ENST00000561878 C14orf93Q9H972 538 aaKnown RBP34.48■■■■□ 3.11
TMEM170A-202ENST00000561878 ZNF772Q68DY9 489 aaPredicted RBP34.47■■■■□ 3.11
TMEM170A-202ENST00000561878 WAPLQ7Z5K2 1190 aa34.46■■■■□ 3.11
TMEM170A-202ENST00000561878 PNPLA6Q8IY17 1366 aa34.46■■■■□ 3.11
TMEM170A-202ENST00000561878 DHX57Q6P158 1386 aaKnown RBP34.44■■■■□ 3.1
TMEM170A-202ENST00000561878 SOS2Q07890 1332 aaPredicted RBP34.43■■■■□ 3.1
TMEM170A-202ENST00000561878 PLEKHH1Q9ULM0 1364 aa34.41■■■■□ 3.1
TMEM170A-202ENST00000561878 CFAP70Q5T0N1 1121 aa34.41■■■■□ 3.1
TMEM170A-202ENST00000561878 SIRT1Q96EB6 747 aa34.41■■■■□ 3.1
TMEM170A-202ENST00000561878 ESCO1Q5FWF5 840 aa34.4■■■■□ 3.1
TMEM170A-202ENST00000561878 NPHP3Q7Z494 1330 aa34.38■■■■□ 3.09
TMEM170A-202ENST00000561878 FMN2Q9NZ56 1722 aa34.36■■■■□ 3.09
TMEM170A-202ENST00000561878 STAC3Q96MF2 364 aa34.33■■■■□ 3.09
TMEM170A-202ENST00000561878 AFF2P51816 1311 aa34.31■■■■□ 3.08
TMEM170A-202ENST00000561878 NUTM2FA1L443 756 aa34.31■■■■□ 3.08
TMEM170A-202ENST00000561878 DLC1Q96QB1 1528 aa34.3■■■■□ 3.08
TMEM170A-202ENST00000561878 DCAF11Q8TEB1 546 aa34.3■■■■□ 3.08
TMEM170A-202ENST00000561878 KIF1AQ12756 1690 aa34.29■■■■□ 3.08
TMEM170A-202ENST00000561878 C8orf37Q96NL8 207 aa34.29■■■■□ 3.08
TMEM170A-202ENST00000561878 COL22A1Q8NFW1 1626 aaPredicted RBP34.29■■■■□ 3.08
TMEM170A-202ENST00000561878 PXDNQ92626 1479 aa34.28■■■■□ 3.08
TMEM170A-202ENST00000561878 KDM2AQ9Y2K7 1162 aa34.28■■■■□ 3.08
TMEM170A-202ENST00000561878 FOXO3O43524 673 aa34.27■■■■□ 3.08
TMEM170A-202ENST00000561878 PRAM1Q96QH2 718 aa34.27■■■■□ 3.08
TMEM170A-202ENST00000561878 ADGRB1O14514 1584 aa34.27■■■■□ 3.08
TMEM170A-202ENST00000561878 RXRBP28702 533 aa34.25■■■■□ 3.07
TMEM170A-202ENST00000561878 ADAMTS2O95450 1211 aa34.24■■■■□ 3.07
TMEM170A-202ENST00000561878 POGKQ9P215 609 aa34.24■■■■□ 3.07
TMEM170A-202ENST00000561878 SAFB2Q14151 953 aaKnown RBP eCLIP34.21■■■■□ 3.07
TMEM170A-202ENST00000561878 XPCQ01831 940 aaPredicted RBP34.2■■■■□ 3.07
TMEM170A-202ENST00000561878 NGLY1Q96IV0 654 aa34.2■■■■□ 3.07
TMEM170A-202ENST00000561878 CDK12Q9NYV4 1490 aaPredicted RBP34.2■■■■□ 3.06
TMEM170A-202ENST00000561878 ADGRB2O60241 1585 aa34.19■■■■□ 3.06
TMEM170A-202ENST00000561878 RGPD8O14715 1765 aaPredicted RBP34.18■■■■□ 3.06
TMEM170A-202ENST00000561878 TRAK1Q9UPV9 953 aa34.18■■■■□ 3.06
TMEM170A-202ENST00000561878 QTRT2Q9H974 415 aaKnown RBP34.14■■■■□ 3.06
TMEM170A-202ENST00000561878 PHF8Q9UPP1 1060 aa34.14■■■■□ 3.06
TMEM170A-202ENST00000561878 ANKARQ7Z5J8 1434 aa34.13■■■■□ 3.05
TMEM170A-202ENST00000561878 RBM6P78332 1123 aaKnown RBP34.11■■■■□ 3.05
TMEM170A-202ENST00000561878 KRT28Q7Z3Y7 464 aa34.11■■■■□ 3.05
TMEM170A-202ENST00000561878 MARF1Q9Y4F3 1742 aaKnown RBP34.1■■■■□ 3.05
TMEM170A-202ENST00000561878 SPATA31A3Q5VYP0 1347 aa34.1■■■■□ 3.05
TMEM170A-202ENST00000561878 EIF3AQ14152 1382 aaKnown RBP34.1■■■■□ 3.05
TMEM170A-202ENST00000561878 PSME1Q06323 249 aa34.09■■■■□ 3.05
TMEM170A-202ENST00000561878 USP21Q9UK80 565 aa34.09■■■■□ 3.05
TMEM170A-202ENST00000561878 FNBP4Q8N3X1 1017 aaPredicted RBP34.07■■■■□ 3.04
TMEM170A-202ENST00000561878 USP32Q8NFA0 1604 aa34.07■■■■□ 3.04
TMEM170A-202ENST00000561878 MINK1Q8N4C8 1332 aaPredicted RBP34.05■■■■□ 3.04
TMEM170A-202ENST00000561878 ARHGEF28Q8N1W1 1705 aaKnown RBP34.05■■■■□ 3.04
TMEM170A-202ENST00000561878 TNS3Q68CZ2 1445 aa34.04■■■■□ 3.04
TMEM170A-202ENST00000561878 KIAA1210Q9ULL0 1709 aa34.04■■■■□ 3.04
TMEM170A-202ENST00000561878 HIRIP3Q9BW71 556 aaPredicted RBP34.04■■■■□ 3.04
TMEM170A-202ENST00000561878 TRPC5Q9UL62 973 aaPredicted RBP34.04■■■■□ 3.04
TMEM170A-202ENST00000561878 TULP4Q9NRJ4 1543 aa34.02■■■■□ 3.04
TMEM170A-202ENST00000561878 RGS12O14924 1447 aa34.02■■■■□ 3.04
TMEM170A-202ENST00000561878 SBNO1A3KN83 1393 aa34.01■■■■□ 3.04
TMEM170A-202ENST00000561878 WASLO00401 505 aaPredicted RBP33.99■■■■□ 3.03
TMEM170A-202ENST00000561878 PMFBP1Q8TBY8 1022 aa33.98■■■■□ 3.03
TMEM170A-202ENST00000561878 ATRNO75882 1429 aa33.97■■■■□ 3.03
TMEM170A-202ENST00000561878 UPF1Q92900 1129 aaKnown RBP eCLIP33.97■■■■□ 3.03
TMEM170A-202ENST00000561878 ARHGEF10O15013 1369 aa33.97■■■■□ 3.03
TMEM170A-202ENST00000561878 HAP1P54257 671 aaPredicted RBP33.96■■■■□ 3.03
TMEM170A-202ENST00000561878 BCL9LQ86UU0 1499 aa33.94■■■■□ 3.02
TMEM170A-202ENST00000561878 LMOD2Q6P5Q4 547 aa33.93■■■■□ 3.02
TMEM170A-202ENST00000561878 PRR36Q9H6K5 1346 aa33.93■■■■□ 3.02
TMEM170A-202ENST00000561878 GPRASP1Q5JY77 1395 aa33.93■■■■□ 3.02
TMEM170A-202ENST00000561878 ITSN1Q15811 1721 aa33.92■■■■□ 3.02
TMEM170A-202ENST00000561878 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.92■■■■□ 3.02
TMEM170A-202ENST00000561878 TRPM3Q9HCF6 1732 aaPredicted RBP33.9■■■■□ 3.02
TMEM170A-202ENST00000561878 ABCA3Q99758 1704 aa33.89■■■■□ 3.02
TMEM170A-202ENST00000561878 SLIT2O94813 1529 aa33.88■■■■□ 3.01
TMEM170A-202ENST00000561878 ATP7BP35670 1465 aa33.85■■■■□ 3.01
TMEM170A-202ENST00000561878 NGDNQ8NEJ9 315 aaKnown RBP33.85■■■■□ 3.01
TMEM170A-202ENST00000561878 CABLES1Q8TDN4 633 aa33.85■■■■□ 3.01
TMEM170A-202ENST00000561878 NBPF1Q3BBV0 1214 aa33.84■■■■□ 3.01
TMEM170A-202ENST00000561878 UNC5CLQ8IV45 518 aa33.84■■■■□ 3.01
TMEM170A-202ENST00000561878 ALS2Q96Q42 1657 aa33.84■■■■□ 3.01
TMEM170A-202ENST00000561878 PLEKHG5O94827 1062 aa33.83■■■■□ 3.01
TMEM170A-202ENST00000561878 NUDT16Q96DE0 195 aaKnown RBP33.82■■■■□ 3
TMEM170A-202ENST00000561878 GJD4Q96KN9 370 aaPredicted RBP33.82■■■■□ 3
TMEM170A-202ENST00000561878 ATAD2Q6PL18 1390 aa33.81■■■■□ 3
TMEM170A-202ENST00000561878 CDK19Q9BWU1 502 aa33.8■■■■□ 3
TMEM170A-202ENST00000561878 PLCH1Q4KWH8 1693 aa33.8■■■■□ 3
TMEM170A-202ENST00000561878 NWD2Q9ULI1 1742 aa33.79■■■■□ 3
TMEM170A-202ENST00000561878 L3MBTL2Q969R5 705 aa33.79■■■■□ 3
TMEM170A-202ENST00000561878 TOPAZ1Q8N9V7 1692 aa33.76■■■□□ 2.99
TMEM170A-202ENST00000561878 SIN3AQ96ST3 1273 aa33.75■■■□□ 2.99
TMEM170A-202ENST00000561878 CENPJQ9HC77 1338 aaPredicted RBP33.75■■■□□ 2.99
TMEM170A-202ENST00000561878 RALGAPBQ86X10 1494 aa33.75■■■□□ 2.99
TMEM170A-202ENST00000561878 PAK3O75914 559 aaPredicted RBP33.74■■■□□ 2.99
TMEM170A-202ENST00000561878 GLI3P10071 1580 aa33.72■■■□□ 2.99
TMEM170A-202ENST00000561878 NEUROD1Q13562 356 aa33.72■■■□□ 2.99
TMEM170A-202ENST00000561878 CCDC61Q9Y6R9 512 aa33.72■■■□□ 2.99
TMEM170A-202ENST00000561878 QRICH2Q9H0J4 1663 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms