RNA–Protein interactions for RNA: ENST00000561840.1

TRAPPC2L-202, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 5 BASIC

Gene TRAPPC2L, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-202ENST00000561840 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
TRAPPC2L-202ENST00000561840 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
TRAPPC2L-202ENST00000561840 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC2L-202ENST00000561840 PIK3C2GO75747 1445 aa17.11■□□□□ 0.33
TRAPPC2L-202ENST00000561840 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
TRAPPC2L-202ENST00000561840 YTHDC2Q9H6S0 1430 aaKnown RBP17.1■□□□□ 0.33
TRAPPC2L-202ENST00000561840 NUTM2FA1L443 756 aa17.09■□□□□ 0.33
TRAPPC2L-202ENST00000561840 POGKQ9P215 609 aa17.09■□□□□ 0.33
TRAPPC2L-202ENST00000561840 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
TRAPPC2L-202ENST00000561840 TECPR2O15040 1411 aa17.07■□□□□ 0.32
TRAPPC2L-202ENST00000561840 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC2L-202ENST00000561840 NPHP3Q7Z494 1330 aa17.06■□□□□ 0.32
TRAPPC2L-202ENST00000561840 FOXO3O43524 673 aa17.06■□□□□ 0.32
TRAPPC2L-202ENST00000561840 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRAPPC2L-202ENST00000561840 MYOM2P54296 1465 aa17.05■□□□□ 0.32
TRAPPC2L-202ENST00000561840 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
TRAPPC2L-202ENST00000561840 SHPRHQ149N8 1683 aa17.05■□□□□ 0.32
TRAPPC2L-202ENST00000561840 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
TRAPPC2L-202ENST00000561840 LRP6O75581 1613 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 ADAMTS2O95450 1211 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 NGLY1Q96IV0 654 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 TRAK1Q9UPV9 953 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
TRAPPC2L-202ENST00000561840 AFF2P51816 1311 aa17.02■□□□□ 0.32
TRAPPC2L-202ENST00000561840 RXRBP28702 533 aa17.02■□□□□ 0.32
TRAPPC2L-202ENST00000561840 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC2L-202ENST00000561840 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
TRAPPC2L-202ENST00000561840 PSME1Q06323 249 aa16.99■□□□□ 0.31
TRAPPC2L-202ENST00000561840 KRT28Q7Z3Y7 464 aa16.99■□□□□ 0.31
TRAPPC2L-202ENST00000561840 QTRT2Q9H974 415 aaKnown RBP16.99■□□□□ 0.31
TRAPPC2L-202ENST00000561840 LAMC1P11047 1609 aa16.99■□□□□ 0.31
TRAPPC2L-202ENST00000561840 PHF8Q9UPP1 1060 aa16.98■□□□□ 0.31
TRAPPC2L-202ENST00000561840 KNDC1Q76NI1 1749 aa16.98■□□□□ 0.31
TRAPPC2L-202ENST00000561840 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC2L-202ENST00000561840 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC2L-202ENST00000561840 RBM6P78332 1123 aaKnown RBP16.94■□□□□ 0.3
TRAPPC2L-202ENST00000561840 USP21Q9UK80 565 aa16.94■□□□□ 0.3
TRAPPC2L-202ENST00000561840 DLC1Q96QB1 1528 aa16.93■□□□□ 0.3
TRAPPC2L-202ENST00000561840 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC2L-202ENST00000561840 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
TRAPPC2L-202ENST00000561840 PMFBP1Q8TBY8 1022 aa16.93■□□□□ 0.3
TRAPPC2L-202ENST00000561840 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
TRAPPC2L-202ENST00000561840 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
TRAPPC2L-202ENST00000561840 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
TRAPPC2L-202ENST00000561840 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC2L-202ENST00000561840 FNBP4Q8N3X1 1017 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC2L-202ENST00000561840 TRPC5Q9UL62 973 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC2L-202ENST00000561840 PXDNQ92626 1479 aa16.9■□□□□ 0.3
TRAPPC2L-202ENST00000561840 ADGRB1O14514 1584 aa16.89■□□□□ 0.3
TRAPPC2L-202ENST00000561840 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
TRAPPC2L-202ENST00000561840 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
TRAPPC2L-202ENST00000561840 NGDNQ8NEJ9 315 aaKnown RBP16.88■□□□□ 0.29
TRAPPC2L-202ENST00000561840 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
TRAPPC2L-202ENST00000561840 KIF1AQ12756 1690 aa16.87■□□□□ 0.29
TRAPPC2L-202ENST00000561840 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
TRAPPC2L-202ENST00000561840 NBPF1Q3BBV0 1214 aa16.86■□□□□ 0.29
TRAPPC2L-202ENST00000561840 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
TRAPPC2L-202ENST00000561840 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC2L-202ENST00000561840 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
TRAPPC2L-202ENST00000561840 NUDT16Q96DE0 195 aaKnown RBP16.85■□□□□ 0.29
TRAPPC2L-202ENST00000561840 CDK19Q9BWU1 502 aa16.85■□□□□ 0.29
TRAPPC2L-202ENST00000561840 SBNO1A3KN83 1393 aa16.85■□□□□ 0.29
TRAPPC2L-202ENST00000561840 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC2L-202ENST00000561840 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC2L-202ENST00000561840 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
TRAPPC2L-202ENST00000561840 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
TRAPPC2L-202ENST00000561840 COL22A1Q8NFW1 1626 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC2L-202ENST00000561840 UPF1Q92900 1129 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAPPC2L-202ENST00000561840 TNS3Q68CZ2 1445 aa16.82■□□□□ 0.28
TRAPPC2L-202ENST00000561840 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
TRAPPC2L-202ENST00000561840 UNC5CLQ8IV45 518 aa16.81■□□□□ 0.28
TRAPPC2L-202ENST00000561840 ADGRB2O60241 1585 aa16.81■□□□□ 0.28
TRAPPC2L-202ENST00000561840 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC2L-202ENST00000561840 CCDC61Q9Y6R9 512 aa16.8■□□□□ 0.28
TRAPPC2L-202ENST00000561840 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC2L-202ENST00000561840 SRPK2P78362 688 aaKnown RBP16.79■□□□□ 0.28
TRAPPC2L-202ENST00000561840 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
TRAPPC2L-202ENST00000561840 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC2L-202ENST00000561840 CCDC9Q9Y3X0 531 aaKnown RBP16.78■□□□□ 0.28
TRAPPC2L-202ENST00000561840 KIAA1210Q9ULL0 1709 aa16.78■□□□□ 0.28
TRAPPC2L-202ENST00000561840 ATRNO75882 1429 aa16.78■□□□□ 0.28
TRAPPC2L-202ENST00000561840 BCL9LQ86UU0 1499 aa16.77■□□□□ 0.28
TRAPPC2L-202ENST00000561840 USP32Q8NFA0 1604 aa16.76■□□□□ 0.27
TRAPPC2L-202ENST00000561840 RGS12O14924 1447 aa16.76■□□□□ 0.27
TRAPPC2L-202ENST00000561840 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
TRAPPC2L-202ENST00000561840 FAM83GA6ND36 823 aa16.75■□□□□ 0.27
TRAPPC2L-202ENST00000561840 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
TRAPPC2L-202ENST00000561840 ARHGEF28Q8N1W1 1705 aaKnown RBP16.75■□□□□ 0.27
TRAPPC2L-202ENST00000561840 ACEP12821 1306 aa16.74■□□□□ 0.27
TRAPPC2L-202ENST00000561840 MARF1Q9Y4F3 1742 aaKnown RBP16.73■□□□□ 0.27
TRAPPC2L-202ENST00000561840 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
TRAPPC2L-202ENST00000561840 SLIT2O94813 1529 aa16.72■□□□□ 0.27
TRAPPC2L-202ENST00000561840 VPS72Q15906 364 aa16.72■□□□□ 0.27
TRAPPC2L-202ENST00000561840 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
TRAPPC2L-202ENST00000561840 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
TRAPPC2L-202ENST00000561840 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
TRAPPC2L-202ENST00000561840 NUTM2GQ5VZR2 741 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms