RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 CFAP70Q5T0N1 1121 aa25.46■■□□□ 1.67
MAP1LC3B-202ENST00000561823 ORAI2Q96SN7 254 aa25.46■■□□□ 1.67
MAP1LC3B-202ENST00000561823 SIRT1Q96EB6 747 aa25.44■■□□□ 1.66
MAP1LC3B-202ENST00000561823 PLEKHH1Q9ULM0 1364 aa25.43■■□□□ 1.66
MAP1LC3B-202ENST00000561823 MEX3CQ5U5Q3 659 aaKnown RBP25.42■■□□□ 1.66
MAP1LC3B-202ENST00000561823 CDC42BPGQ6DT37 1551 aa25.42■■□□□ 1.66
MAP1LC3B-202ENST00000561823 DHX57Q6P158 1386 aaKnown RBP25.41■■□□□ 1.66
MAP1LC3B-202ENST00000561823 KNDC1Q76NI1 1749 aa25.4■■□□□ 1.66
MAP1LC3B-202ENST00000561823 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
MAP1LC3B-202ENST00000561823 LAMC1P11047 1609 aa25.39■■□□□ 1.66
MAP1LC3B-202ENST00000561823 NUTM2BA6NNL0 878 aaPredicted RBP25.39■■□□□ 1.66
MAP1LC3B-202ENST00000561823 NUTM2EB1AL46 878 aaPredicted RBP25.39■■□□□ 1.66
MAP1LC3B-202ENST00000561823 NUTM2AQ8IVF1 878 aaPredicted RBP25.39■■□□□ 1.66
MAP1LC3B-202ENST00000561823 ESCO1Q5FWF5 840 aa25.38■■□□□ 1.65
MAP1LC3B-202ENST00000561823 PNPLA6Q8IY17 1366 aa25.37■■□□□ 1.65
MAP1LC3B-202ENST00000561823 DCAF11Q8TEB1 546 aa25.37■■□□□ 1.65
MAP1LC3B-202ENST00000561823 STAC3Q96MF2 364 aa25.37■■□□□ 1.65
MAP1LC3B-202ENST00000561823 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
MAP1LC3B-202ENST00000561823 ZNF772Q68DY9 489 aaPredicted RBP25.34■■□□□ 1.65
MAP1LC3B-202ENST00000561823 NUTM2FA1L443 756 aa25.33■■□□□ 1.65
MAP1LC3B-202ENST00000561823 NPHP3Q7Z494 1330 aa25.32■■□□□ 1.64
MAP1LC3B-202ENST00000561823 PRAM1Q96QH2 718 aa25.31■■□□□ 1.64
MAP1LC3B-202ENST00000561823 FOXO3O43524 673 aa25.3■■□□□ 1.64
MAP1LC3B-202ENST00000561823 ADGRB1O14514 1584 aa25.3■■□□□ 1.64
MAP1LC3B-202ENST00000561823 DLC1Q96QB1 1528 aa25.28■■□□□ 1.64
MAP1LC3B-202ENST00000561823 SAFB2Q14151 953 aaKnown RBP eCLIP25.27■■□□□ 1.64
MAP1LC3B-202ENST00000561823 POGKQ9P215 609 aa25.27■■□□□ 1.64
MAP1LC3B-202ENST00000561823 PXDNQ92626 1479 aa25.26■■□□□ 1.63
MAP1LC3B-202ENST00000561823 FMN2Q9NZ56 1722 aa25.26■■□□□ 1.63
MAP1LC3B-202ENST00000561823 TRAK1Q9UPV9 953 aa25.25■■□□□ 1.63
MAP1LC3B-202ENST00000561823 AFF2P51816 1311 aa25.25■■□□□ 1.63
MAP1LC3B-202ENST00000561823 XPCQ01831 940 aaPredicted RBP25.24■■□□□ 1.63
MAP1LC3B-202ENST00000561823 C8orf37Q96NL8 207 aa25.24■■□□□ 1.63
MAP1LC3B-202ENST00000561823 ADAMTS2O95450 1211 aa25.22■■□□□ 1.63
MAP1LC3B-202ENST00000561823 RXRBP28702 533 aa25.19■■□□□ 1.62
MAP1LC3B-202ENST00000561823 NGLY1Q96IV0 654 aa25.19■■□□□ 1.62
MAP1LC3B-202ENST00000561823 PHF8Q9UPP1 1060 aa25.19■■□□□ 1.62
MAP1LC3B-202ENST00000561823 COL22A1Q8NFW1 1626 aaPredicted RBP25.18■■□□□ 1.62
MAP1LC3B-202ENST00000561823 KRT28Q7Z3Y7 464 aa25.17■■□□□ 1.62
MAP1LC3B-202ENST00000561823 KIF1AQ12756 1690 aa25.17■■□□□ 1.62
MAP1LC3B-202ENST00000561823 ADGRB2O60241 1585 aa25.15■■□□□ 1.62
MAP1LC3B-202ENST00000561823 ANKARQ7Z5J8 1434 aa25.15■■□□□ 1.62
MAP1LC3B-202ENST00000561823 HIRIP3Q9BW71 556 aaPredicted RBP25.15■■□□□ 1.62
MAP1LC3B-202ENST00000561823 QTRT2Q9H974 415 aaKnown RBP25.15■■□□□ 1.62
MAP1LC3B-202ENST00000561823 SPATA31A3Q5VYP0 1347 aa25.14■■□□□ 1.62
MAP1LC3B-202ENST00000561823 MINK1Q8N4C8 1332 aaPredicted RBP25.14■■□□□ 1.62
MAP1LC3B-202ENST00000561823 PSME1Q06323 249 aa25.12■■□□□ 1.61
MAP1LC3B-202ENST00000561823 FNBP4Q8N3X1 1017 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3B-202ENST00000561823 CDK12Q9NYV4 1490 aaPredicted RBP25.11■■□□□ 1.61
MAP1LC3B-202ENST00000561823 WASLO00401 505 aaPredicted RBP25.11■■□□□ 1.61
MAP1LC3B-202ENST00000561823 EIF3AQ14152 1382 aaKnown RBP25.1■■□□□ 1.61
MAP1LC3B-202ENST00000561823 RBM6P78332 1123 aaKnown RBP25.1■■□□□ 1.61
MAP1LC3B-202ENST00000561823 USP21Q9UK80 565 aa25.1■■□□□ 1.61
MAP1LC3B-202ENST00000561823 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
MAP1LC3B-202ENST00000561823 USP32Q8NFA0 1604 aa25.09■■□□□ 1.61
MAP1LC3B-202ENST00000561823 PMFBP1Q8TBY8 1022 aa25.09■■□□□ 1.61
MAP1LC3B-202ENST00000561823 PRR36Q9H6K5 1346 aa25.08■■□□□ 1.6
MAP1LC3B-202ENST00000561823 SBNO1A3KN83 1393 aa25.07■■□□□ 1.6
MAP1LC3B-202ENST00000561823 NBPF1Q3BBV0 1214 aa25.07■■□□□ 1.6
MAP1LC3B-202ENST00000561823 TNS3Q68CZ2 1445 aa25.06■■□□□ 1.6
MAP1LC3B-202ENST00000561823 TULP4Q9NRJ4 1543 aa25.06■■□□□ 1.6
MAP1LC3B-202ENST00000561823 KIAA1210Q9ULL0 1709 aa25.06■■□□□ 1.6
MAP1LC3B-202ENST00000561823 L3MBTL2Q969R5 705 aa25.05■■□□□ 1.6
MAP1LC3B-202ENST00000561823 TRPC5Q9UL62 973 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3B-202ENST00000561823 ARHGEF28Q8N1W1 1705 aaKnown RBP25.05■■□□□ 1.6
MAP1LC3B-202ENST00000561823 SIN3AQ96ST3 1273 aa25.04■■□□□ 1.6
MAP1LC3B-202ENST00000561823 ARHGEF10O15013 1369 aa25.01■■□□□ 1.59
MAP1LC3B-202ENST00000561823 RGS12O14924 1447 aa25.01■■□□□ 1.59
MAP1LC3B-202ENST00000561823 BCL9LQ86UU0 1499 aa25.01■■□□□ 1.59
MAP1LC3B-202ENST00000561823 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
MAP1LC3B-202ENST00000561823 ATRNO75882 1429 aa25■■□□□ 1.59
MAP1LC3B-202ENST00000561823 GPRASP1Q5JY77 1395 aa24.99■■□□□ 1.59
MAP1LC3B-202ENST00000561823 NUDT16Q96DE0 195 aaKnown RBP24.99■■□□□ 1.59
MAP1LC3B-202ENST00000561823 CDK19Q9BWU1 502 aa24.99■■□□□ 1.59
MAP1LC3B-202ENST00000561823 NEUROD1Q13562 356 aa24.98■■□□□ 1.59
MAP1LC3B-202ENST00000561823 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
MAP1LC3B-202ENST00000561823 CABLES1Q8TDN4 633 aa24.98■■□□□ 1.59
MAP1LC3B-202ENST00000561823 UPF1Q92900 1129 aaKnown RBP eCLIP24.98■■□□□ 1.59
MAP1LC3B-202ENST00000561823 HAP1P54257 671 aaPredicted RBP24.97■■□□□ 1.59
MAP1LC3B-202ENST00000561823 MARF1Q9Y4F3 1742 aaKnown RBP24.97■■□□□ 1.59
MAP1LC3B-202ENST00000561823 ATP7BP35670 1465 aa24.96■■□□□ 1.59
MAP1LC3B-202ENST00000561823 PLEKHG5O94827 1062 aa24.94■■□□□ 1.58
MAP1LC3B-202ENST00000561823 UNC5CLQ8IV45 518 aa24.94■■□□□ 1.58
MAP1LC3B-202ENST00000561823 SLIT2O94813 1529 aa24.94■■□□□ 1.58
MAP1LC3B-202ENST00000561823 TRPM3Q9HCF6 1732 aaPredicted RBP24.92■■□□□ 1.58
MAP1LC3B-202ENST00000561823 CENPJQ9HC77 1338 aaPredicted RBP24.92■■□□□ 1.58
MAP1LC3B-202ENST00000561823 CCDC61Q9Y6R9 512 aa24.92■■□□□ 1.58
MAP1LC3B-202ENST00000561823 GJD4Q96KN9 370 aaPredicted RBP24.91■■□□□ 1.58
MAP1LC3B-202ENST00000561823 PLEKHG3A1L390 1219 aa24.88■■□□□ 1.57
MAP1LC3B-202ENST00000561823 PAK3O75914 559 aaPredicted RBP24.88■■□□□ 1.57
MAP1LC3B-202ENST00000561823 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
MAP1LC3B-202ENST00000561823 ALS2Q96Q42 1657 aa24.88■■□□□ 1.57
MAP1LC3B-202ENST00000561823 ITSN1Q15811 1721 aa24.87■■□□□ 1.57
MAP1LC3B-202ENST00000561823 POLR3AO14802 1390 aaPredicted RBP24.87■■□□□ 1.57
MAP1LC3B-202ENST00000561823 ACEP12821 1306 aa24.86■■□□□ 1.57
MAP1LC3B-202ENST00000561823 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.86■■□□□ 1.57
MAP1LC3B-202ENST00000561823 FAM83GA6ND36 823 aa24.86■■□□□ 1.57
MAP1LC3B-202ENST00000561823 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
MAP1LC3B-202ENST00000561823 SRPK2P78362 688 aaKnown RBP24.85■■□□□ 1.57
MAP1LC3B-202ENST00000561823 NBPF8Q3BBV2 869 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms