RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
USP8-216ENST00000561206 TRIM32Q13049 653 aa11.05□□□□□ -0.64
USP8-216ENST00000561206 ZSCAN1Q8NBB4 408 aa11.05□□□□□ -0.64
USP8-216ENST00000561206 HPS1Q92902 700 aa11.04□□□□□ -0.64
USP8-216ENST00000561206 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
USP8-216ENST00000561206 NXF1Q9UBU9 619 aaKnown RBP11.04□□□□□ -0.64
USP8-216ENST00000561206 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
USP8-216ENST00000561206 GMPRP36959 345 aa11.02□□□□□ -0.65
USP8-216ENST00000561206 GCGRP47871 477 aa11.01□□□□□ -0.65
USP8-216ENST00000561206 MMP16P51512 607 aa11.01□□□□□ -0.65
USP8-216ENST00000561206 IRF7Q92985 503 aa11□□□□□ -0.65
USP8-216ENST00000561206 HIC1Q14526 733 aa10.98□□□□□ -0.65
USP8-216ENST00000561206 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
USP8-216ENST00000561206 RNF19BQ6ZMZ0 732 aa10.97□□□□□ -0.65
USP8-216ENST00000561206 H3BM21 787 aa10.95□□□□□ -0.66
USP8-216ENST00000561206 FECHP22830 423 aa10.95□□□□□ -0.66
USP8-216ENST00000561206 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
USP8-216ENST00000561206 SUZ12Q15022 739 aaKnown RBP10.94□□□□□ -0.66
USP8-216ENST00000561206 WNT7BP56706 349 aa10.93□□□□□ -0.66
USP8-216ENST00000561206 PAXIP1Q6ZW49 1069 aaPredicted RBP10.93□□□□□ -0.66
USP8-216ENST00000561206 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
USP8-216ENST00000561206 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
USP8-216ENST00000561206 DXOO77932 396 aaKnown RBP10.92□□□□□ -0.66
USP8-216ENST00000561206 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
USP8-216ENST00000561206 SKOR1P84550 965 aa10.91□□□□□ -0.66
USP8-216ENST00000561206 Q3C1V9 767 aa10.91□□□□□ -0.66
USP8-216ENST00000561206 GRIPAP1Q4V328 841 aa10.91□□□□□ -0.66
USP8-216ENST00000561206 TRIM46Q7Z4K8 759 aa10.9□□□□□ -0.66
USP8-216ENST00000561206 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
USP8-216ENST00000561206 ERBB4Q15303 1308 aa10.89□□□□□ -0.67
USP8-216ENST00000561206 SIAH2O43255 324 aa10.85□□□□□ -0.67
USP8-216ENST00000561206 USB1Q9BQ65 265 aaKnown RBP10.85□□□□□ -0.67
USP8-216ENST00000561206 GNPATO15228 680 aa10.84□□□□□ -0.67
USP8-216ENST00000561206 ALDH1A1P00352 501 aa10.83□□□□□ -0.68
USP8-216ENST00000561206 VSIG8P0DPA2 414 aa10.83□□□□□ -0.68
USP8-216ENST00000561206 GPR37O15354 613 aa10.82□□□□□ -0.68
USP8-216ENST00000561206 BMP1P13497 986 aa10.82□□□□□ -0.68
USP8-216ENST00000561206 KCNMA1Q12791 1236 aa10.82□□□□□ -0.68
USP8-216ENST00000561206 CAPN5O15484 640 aaPredicted RBP10.81□□□□□ -0.68
USP8-216ENST00000561206 VEGFBP49765 207 aa10.81□□□□□ -0.68
USP8-216ENST00000561206 GSK3AP49840 483 aa10.81□□□□□ -0.68
USP8-216ENST00000561206 PHOX2BQ99453 314 aa10.81□□□□□ -0.68
USP8-216ENST00000561206 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
USP8-216ENST00000561206 SEMA3EO15041 775 aa10.78□□□□□ -0.68
USP8-216ENST00000561206 CD46P15529 392 aa10.75□□□□□ -0.69
USP8-216ENST00000561206 CCDC24Q8N4L8 307 aa10.75□□□□□ -0.69
USP8-216ENST00000561206 ZFP42Q96MM3 310 aa10.75□□□□□ -0.69
USP8-216ENST00000561206 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
USP8-216ENST00000561206 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
USP8-216ENST00000561206 EHBP1Q8NDI1 1231 aa10.72□□□□□ -0.69
USP8-216ENST00000561206 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
USP8-216ENST00000561206 KDM4AO75164 1064 aa10.71□□□□□ -0.69
USP8-216ENST00000561206 USP46P62068 366 aa10.71□□□□□ -0.69
USP8-216ENST00000561206 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.69
USP8-216ENST00000561206 TESPA1A2RU30 521 aaPredicted RBP10.7□□□□□ -0.7
USP8-216ENST00000561206 JUNDP17535 347 aa10.7□□□□□ -0.7
USP8-216ENST00000561206 MPNDQ8N594 471 aa10.68□□□□□ -0.7
USP8-216ENST00000561206 PTCRAQ6ISU1 281 aaPredicted RBP10.67□□□□□ -0.7
USP8-216ENST00000561206 MRPL14Q6P1L8 145 aaKnown RBP10.66□□□□□ -0.7
USP8-216ENST00000561206 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
USP8-216ENST00000561206 SH3BP2P78314 561 aa10.65□□□□□ -0.7
USP8-216ENST00000561206 HOXA2O43364 376 aa10.64□□□□□ -0.71
USP8-216ENST00000561206 SMYD5Q6GMV2 418 aa10.64□□□□□ -0.71
USP8-216ENST00000561206 TMEM151AQ8N4L1 468 aa10.64□□□□□ -0.71
USP8-216ENST00000561206 HLA-CQ95604 372 aa10.64□□□□□ -0.71
USP8-216ENST00000561206 NUDT12Q9BQG2 462 aa10.64□□□□□ -0.71
USP8-216ENST00000561206 SCARF1Q14162 830 aa10.62□□□□□ -0.71
USP8-216ENST00000561206 RASSF7Q02833 373 aa10.61□□□□□ -0.71
USP8-216ENST00000561206 RETREG3Q86VR2 466 aa10.6□□□□□ -0.71
USP8-216ENST00000561206 KLF16Q9BXK1 252 aaPredicted RBP10.6□□□□□ -0.71
USP8-216ENST00000561206 GDF11O95390 407 aa10.59□□□□□ -0.71
USP8-216ENST00000561206 TIMP2P16035 220 aa10.59□□□□□ -0.71
USP8-216ENST00000561206 PLEKHG3A1L390 1219 aa10.58□□□□□ -0.72
USP8-216ENST00000561206 RNF225M0QZC1 329 aaPredicted RBP10.58□□□□□ -0.72
USP8-216ENST00000561206 NNTQ13423 1086 aa10.58□□□□□ -0.72
USP8-216ENST00000561206 PURBQ96QR8 312 aaKnown RBP10.58□□□□□ -0.72
USP8-216ENST00000561206 ADH1CP00326 375 aa10.57□□□□□ -0.72
USP8-216ENST00000561206 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
USP8-216ENST00000561206 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
USP8-216ENST00000561206 CCNYL3P0C7X3 344 aa10.56□□□□□ -0.72
USP8-216ENST00000561206 VARSP26640 1264 aaKnown RBP10.56□□□□□ -0.72
USP8-216ENST00000561206 PPFIA3O75145 1194 aa10.54□□□□□ -0.72
USP8-216ENST00000561206 SYMPKQ92797 1274 aaKnown RBP10.54□□□□□ -0.72
USP8-216ENST00000561206 GUCA2AQ02747 115 aa10.53□□□□□ -0.72
USP8-216ENST00000561206 PTPRNQ16849 979 aa10.53□□□□□ -0.72
USP8-216ENST00000561206 EVA1BQ9NVM1 165 aa10.53□□□□□ -0.72
USP8-216ENST00000561206 WDR4P57081 412 aaKnown RBP10.52□□□□□ -0.73
USP8-216ENST00000561206 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
USP8-216ENST00000561206 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
USP8-216ENST00000561206 MS4A1P11836 297 aa10.51□□□□□ -0.73
USP8-216ENST00000561206 KRT76Q01546 638 aa10.51□□□□□ -0.73
USP8-216ENST00000561206 IGHA1P01876 353 aa10.5□□□□□ -0.73
USP8-216ENST00000561206 ZNF511Q8NB15 262 aa10.5□□□□□ -0.73
USP8-216ENST00000561206 BAP1Q92560 729 aa10.5□□□□□ -0.73
USP8-216ENST00000561206 MAN1A2O60476 641 aa10.49□□□□□ -0.73
USP8-216ENST00000561206 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
USP8-216ENST00000561206 CDK15Q96Q40 435 aa10.48□□□□□ -0.73
USP8-216ENST00000561206 DNMT3AQ9Y6K1 912 aaPredicted RBP10.48□□□□□ -0.73
USP8-216ENST00000561206 KCNH2Q12809 1159 aa10.47□□□□□ -0.73
USP8-216ENST00000561206 GPIHBP1Q8IV16 184 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms