RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 BBXQ8WY36 941 aaPredicted RBP10.12□□□□□ -0.79
AP4E1-204ENST00000561004 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
AP4E1-204ENST00000561004 PXYLP1Q8TE99 480 aa10.09□□□□□ -0.79
AP4E1-204ENST00000561004 FECHP22830 423 aa10.08□□□□□ -0.8
AP4E1-204ENST00000561004 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
AP4E1-204ENST00000561004 RDH13Q8NBN7 331 aa10.08□□□□□ -0.8
AP4E1-204ENST00000561004 SLC27A5Q9Y2P5 690 aa10.08□□□□□ -0.8
AP4E1-204ENST00000561004 FUT2Q10981 343 aa10.07□□□□□ -0.8
AP4E1-204ENST00000561004 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
AP4E1-204ENST00000561004 SPRYD3Q8NCJ5 442 aa10.07□□□□□ -0.8
AP4E1-204ENST00000561004 NUTM2FA1L443 756 aa10.06□□□□□ -0.8
AP4E1-204ENST00000561004 FCHSD2O94868 740 aa10.06□□□□□ -0.8
AP4E1-204ENST00000561004 WNT7BP56706 349 aa10.06□□□□□ -0.8
AP4E1-204ENST00000561004 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
AP4E1-204ENST00000561004 Q3C1V9 767 aa10.05□□□□□ -0.8
AP4E1-204ENST00000561004 TMEM151AQ8N4L1 468 aa10.05□□□□□ -0.8
AP4E1-204ENST00000561004 PRDM9Q9NQV7 894 aa10.05□□□□□ -0.8
AP4E1-204ENST00000561004 RNF225M0QZC1 329 aaPredicted RBP10.04□□□□□ -0.8
AP4E1-204ENST00000561004 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
AP4E1-204ENST00000561004 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
AP4E1-204ENST00000561004 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
AP4E1-204ENST00000561004 CAPN5O15484 640 aaPredicted RBP10.02□□□□□ -0.81
AP4E1-204ENST00000561004 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
AP4E1-204ENST00000561004 VEGFBP49765 207 aa10.02□□□□□ -0.81
AP4E1-204ENST00000561004 MMP16P51512 607 aa10.02□□□□□ -0.81
AP4E1-204ENST00000561004 ERBB4Q15303 1308 aa10.02□□□□□ -0.81
AP4E1-204ENST00000561004 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
AP4E1-204ENST00000561004 GDF11O95390 407 aa9.99□□□□□ -0.81
AP4E1-204ENST00000561004 MLLT3P42568 568 aaPredicted RBP9.99□□□□□ -0.81
AP4E1-204ENST00000561004 GCGRP47871 477 aa9.99□□□□□ -0.81
AP4E1-204ENST00000561004 METTL3Q86U44 580 aaKnown RBP9.99□□□□□ -0.81
AP4E1-204ENST00000561004 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
AP4E1-204ENST00000561004 WASF2Q9Y6W5 498 aa9.99□□□□□ -0.81
AP4E1-204ENST00000561004 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
AP4E1-204ENST00000561004 VSIG8P0DPA2 414 aa9.97□□□□□ -0.81
AP4E1-204ENST00000561004 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
AP4E1-204ENST00000561004 BMP1P13497 986 aa9.95□□□□□ -0.82
AP4E1-204ENST00000561004 IGHA1P01876 353 aa9.94□□□□□ -0.82
AP4E1-204ENST00000561004 RASSF7Q02833 373 aa9.94□□□□□ -0.82
AP4E1-204ENST00000561004 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
AP4E1-204ENST00000561004 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
AP4E1-204ENST00000561004 SCARF1Q14162 830 aa9.93□□□□□ -0.82
AP4E1-204ENST00000561004 HIC1Q14526 733 aa9.93□□□□□ -0.82
AP4E1-204ENST00000561004 USB1Q9BQ65 265 aaKnown RBP9.93□□□□□ -0.82
AP4E1-204ENST00000561004 DXOO77932 396 aaKnown RBP9.92□□□□□ -0.82
AP4E1-204ENST00000561004 ZFP42Q96MM3 310 aa9.92□□□□□ -0.82
AP4E1-204ENST00000561004 GSK3AP49840 483 aa9.91□□□□□ -0.82
AP4E1-204ENST00000561004 SKOR1P84550 965 aa9.9□□□□□ -0.82
AP4E1-204ENST00000561004 EHBP1Q8NDI1 1231 aa9.9□□□□□ -0.82
AP4E1-204ENST00000561004 SIAH2O43255 324 aa9.87□□□□□ -0.83
AP4E1-204ENST00000561004 FOXK2Q01167 660 aa9.86□□□□□ -0.83
AP4E1-204ENST00000561004 PLEKHG3A1L390 1219 aa9.84□□□□□ -0.83
AP4E1-204ENST00000561004 MRPL14Q6P1L8 145 aaKnown RBP9.84□□□□□ -0.83
AP4E1-204ENST00000561004 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
AP4E1-204ENST00000561004 DNMT3AQ9Y6K1 912 aaPredicted RBP9.84□□□□□ -0.83
AP4E1-204ENST00000561004 ADAMTS8Q9UP79 889 aa9.81□□□□□ -0.84
AP4E1-204ENST00000561004 GPAT2Q6NUI2 795 aa9.8□□□□□ -0.84
AP4E1-204ENST00000561004 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
AP4E1-204ENST00000561004 GNPATO15228 680 aa9.78□□□□□ -0.84
AP4E1-204ENST00000561004 USP46P62068 366 aa9.78□□□□□ -0.84
AP4E1-204ENST00000561004 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
AP4E1-204ENST00000561004 MAN1A2O60476 641 aa9.77□□□□□ -0.85
AP4E1-204ENST00000561004 KANK3Q6NY19 840 aa9.77□□□□□ -0.85
AP4E1-204ENST00000561004 PURBQ96QR8 312 aaKnown RBP9.77□□□□□ -0.85
AP4E1-204ENST00000561004 JUNDP17535 347 aa9.76□□□□□ -0.85
AP4E1-204ENST00000561004 XP32Q5T750 250 aa9.76□□□□□ -0.85
AP4E1-204ENST00000561004 MPNDQ8N594 471 aa9.76□□□□□ -0.85
AP4E1-204ENST00000561004 KDM4AO75164 1064 aa9.75□□□□□ -0.85
AP4E1-204ENST00000561004 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
AP4E1-204ENST00000561004 ADH1CP00326 375 aa9.74□□□□□ -0.85
AP4E1-204ENST00000561004 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
AP4E1-204ENST00000561004 NNTQ13423 1086 aa9.72□□□□□ -0.85
AP4E1-204ENST00000561004 VARSP26640 1264 aaKnown RBP9.71□□□□□ -0.86
AP4E1-204ENST00000561004 SMYD5Q6GMV2 418 aa9.71□□□□□ -0.86
AP4E1-204ENST00000561004 UPP2O95045 317 aa9.7□□□□□ -0.86
AP4E1-204ENST00000561004 WDR4P57081 412 aaKnown RBP9.7□□□□□ -0.86
AP4E1-204ENST00000561004 SH3BP2P78314 561 aa9.7□□□□□ -0.86
AP4E1-204ENST00000561004 KCNV2Q8TDN2 545 aa9.7□□□□□ -0.86
AP4E1-204ENST00000561004 SCARF2Q96GP6 870 aaPredicted RBP9.7□□□□□ -0.86
AP4E1-204ENST00000561004 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
AP4E1-204ENST00000561004 CD46P15529 392 aa9.69□□□□□ -0.86
AP4E1-204ENST00000561004 MARSP56192 900 aaKnown RBP9.69□□□□□ -0.86
AP4E1-204ENST00000561004 SVOPQ8N4V2 548 aa9.69□□□□□ -0.86
AP4E1-204ENST00000561004 TIMP2P16035 220 aa9.68□□□□□ -0.86
AP4E1-204ENST00000561004 IRS1P35568 1242 aa9.68□□□□□ -0.86
AP4E1-204ENST00000561004 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
AP4E1-204ENST00000561004 NLRP7Q8WX94 980 aa9.67□□□□□ -0.86
AP4E1-204ENST00000561004 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
AP4E1-204ENST00000561004 CNTNAP3Q9BZ76 1288 aa9.67□□□□□ -0.86
AP4E1-204ENST00000561004 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
AP4E1-204ENST00000561004 RETREG3Q86VR2 466 aa9.65□□□□□ -0.86
AP4E1-204ENST00000561004 TSHZ2Q9NRE2 1034 aa9.65□□□□□ -0.86
AP4E1-204ENST00000561004 CCNYL3P0C7X3 344 aa9.64□□□□□ -0.87
AP4E1-204ENST00000561004 TLL2Q9Y6L7 1015 aa9.64□□□□□ -0.87
AP4E1-204ENST00000561004 HOXA2O43364 376 aa9.62□□□□□ -0.87
AP4E1-204ENST00000561004 ADAM23O75077 832 aa9.62□□□□□ -0.87
AP4E1-204ENST00000561004 ZNF385CQ66K41 422 aaPredicted RBP9.62□□□□□ -0.87
AP4E1-204ENST00000561004 MS4A1P11836 297 aa9.61□□□□□ -0.87
AP4E1-204ENST00000561004 BMP2P12643 396 aa9.61□□□□□ -0.87
AP4E1-204ENST00000561004 C6orf118Q5T5N4 469 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms