RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PUS7Q96PZ0 661 aaKnown RBP15.65■□□□□ 0.1
SNX1-212ENST00000560861 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
SNX1-212ENST00000560861 PTCH1Q13635 1447 aa15.65■□□□□ 0.1
SNX1-212ENST00000560861 ADGRB2O60241 1585 aa15.65■□□□□ 0.1
SNX1-212ENST00000560861 ROBO2Q9HCK4 1378 aa15.64■□□□□ 0.09
SNX1-212ENST00000560861 NPHP4O75161 1426 aaPredicted RBP15.64■□□□□ 0.09
SNX1-212ENST00000560861 SLC26A8Q96RN1 970 aa15.64■□□□□ 0.09
SNX1-212ENST00000560861 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.63■□□□□ 0.09
SNX1-212ENST00000560861 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
SNX1-212ENST00000560861 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
SNX1-212ENST00000560861 BCANQ96GW7 911 aa15.61■□□□□ 0.09
SNX1-212ENST00000560861 NWD1Q149M9 1564 aa15.61■□□□□ 0.09
SNX1-212ENST00000560861 WAPLQ7Z5K2 1190 aa15.6■□□□□ 0.09
SNX1-212ENST00000560861 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
SNX1-212ENST00000560861 POGKQ9P215 609 aa15.59■□□□□ 0.09
SNX1-212ENST00000560861 AMOTL2Q9Y2J4 779 aa15.58■□□□□ 0.08
SNX1-212ENST00000560861 MINK1Q8N4C8 1332 aaPredicted RBP15.58■□□□□ 0.08
SNX1-212ENST00000560861 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.08
SNX1-212ENST00000560861 ANP32CO43423 234 aa15.57■□□□□ 0.08
SNX1-212ENST00000560861 SAFB2Q14151 953 aaKnown RBP eCLIP15.57■□□□□ 0.08
SNX1-212ENST00000560861 FBXO41Q8TF61 875 aa15.56■□□□□ 0.08
SNX1-212ENST00000560861 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
SNX1-212ENST00000560861 PANK3Q9H999 370 aa15.56■□□□□ 0.08
SNX1-212ENST00000560861 TOPAZ1Q8N9V7 1692 aa15.55■□□□□ 0.08
SNX1-212ENST00000560861 USP32Q8NFA0 1604 aa15.55■□□□□ 0.08
SNX1-212ENST00000560861 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
SNX1-212ENST00000560861 ATAD2Q6PL18 1390 aa15.54■□□□□ 0.08
SNX1-212ENST00000560861 NINLQ9Y2I6 1382 aa15.54■□□□□ 0.08
SNX1-212ENST00000560861 CD163L1Q9NR16 1453 aa15.53■□□□□ 0.08
SNX1-212ENST00000560861 KCNA6P17658 529 aa15.53■□□□□ 0.08
SNX1-212ENST00000560861 CDK19Q9BWU1 502 aa15.53■□□□□ 0.08
SNX1-212ENST00000560861 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
SNX1-212ENST00000560861 ATP7BP35670 1465 aa15.52■□□□□ 0.08
SNX1-212ENST00000560861 STRCP1A6NGW2 1772 aa15.52■□□□□ 0.08
SNX1-212ENST00000560861 PARD3Q8TEW0 1356 aa15.52■□□□□ 0.08
SNX1-212ENST00000560861 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.08
SNX1-212ENST00000560861 NALCNQ8IZF0 1738 aa15.52■□□□□ 0.08
SNX1-212ENST00000560861 WASLO00401 505 aaPredicted RBP15.52■□□□□ 0.08
SNX1-212ENST00000560861 KTN1Q86UP2 1357 aaKnown RBP15.51■□□□□ 0.07
SNX1-212ENST00000560861 CARD14Q9BXL6 1004 aa15.51■□□□□ 0.07
SNX1-212ENST00000560861 FMN2Q9NZ56 1722 aa15.51■□□□□ 0.07
SNX1-212ENST00000560861 ANKRD36BQ8N2N9 1353 aa15.5■□□□□ 0.07
SNX1-212ENST00000560861 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
SNX1-212ENST00000560861 SLC12A5Q9H2X9 1139 aa15.5■□□□□ 0.07
SNX1-212ENST00000560861 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
SNX1-212ENST00000560861 NKTRP30414 1462 aaKnown RBP15.49■□□□□ 0.07
SNX1-212ENST00000560861 SRPK2P78362 688 aaKnown RBP15.49■□□□□ 0.07
SNX1-212ENST00000560861 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
SNX1-212ENST00000560861 PRR36Q9H6K5 1346 aa15.48■□□□□ 0.07
SNX1-212ENST00000560861 MON2Q7Z3U7 1717 aa15.47■□□□□ 0.07
SNX1-212ENST00000560861 A0A1W2PP64 1363 aa15.47■□□□□ 0.07
SNX1-212ENST00000560861 ITSN1Q15811 1721 aa15.46■□□□□ 0.07
SNX1-212ENST00000560861 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
SNX1-212ENST00000560861 ADGRL3Q9HAR2 1447 aa15.46■□□□□ 0.07
SNX1-212ENST00000560861 RALBP1Q15311 655 aa15.46■□□□□ 0.07
SNX1-212ENST00000560861 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.06
SNX1-212ENST00000560861 CPSF1Q10570 1443 aaKnown RBP15.45■□□□□ 0.06
SNX1-212ENST00000560861 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
SNX1-212ENST00000560861 CERKQ8TCT0 537 aa15.45■□□□□ 0.06
SNX1-212ENST00000560861 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
SNX1-212ENST00000560861 ANKARQ7Z5J8 1434 aa15.44■□□□□ 0.06
SNX1-212ENST00000560861 ANKRD26Q9UPS8 1709 aa15.44■□□□□ 0.06
SNX1-212ENST00000560861 CCDC184Q52MB2 194 aa15.44■□□□□ 0.06
SNX1-212ENST00000560861 NUDT16Q96DE0 195 aaKnown RBP15.44■□□□□ 0.06
SNX1-212ENST00000560861 KNSTRNQ9Y448 316 aa15.44■□□□□ 0.06
SNX1-212ENST00000560861 PPIP5K1Q6PFW1 1433 aa15.43■□□□□ 0.06
SNX1-212ENST00000560861 NRKQ7Z2Y5 1582 aa15.42■□□□□ 0.06
SNX1-212ENST00000560861 CABP1Q9NZU7 370 aa15.42■□□□□ 0.06
SNX1-212ENST00000560861 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
SNX1-212ENST00000560861 KIF20BQ96Q89 1820 aa15.42■□□□□ 0.06
SNX1-212ENST00000560861 MYBBP1AQ9BQG0 1328 aaKnown RBP15.42■□□□□ 0.06
SNX1-212ENST00000560861 CCDC61Q9Y6R9 512 aa15.41■□□□□ 0.06
SNX1-212ENST00000560861 PLEKHG3A1L390 1219 aa15.4■□□□□ 0.06
SNX1-212ENST00000560861 CC2D1BQ5T0F9 858 aaKnown RBP15.4■□□□□ 0.06
SNX1-212ENST00000560861 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
SNX1-212ENST00000560861 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
SNX1-212ENST00000560861 NSD2O96028 1365 aa15.39■□□□□ 0.05
SNX1-212ENST00000560861 TERF2IPQ9NYB0 399 aa15.39■□□□□ 0.05
SNX1-212ENST00000560861 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
SNX1-212ENST00000560861 EDC4Q6P2E9 1401 aaKnown RBP15.37■□□□□ 0.05
SNX1-212ENST00000560861 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
SNX1-212ENST00000560861 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
SNX1-212ENST00000560861 HDGFL2Q7Z4V5 671 aaPredicted RBP15.36■□□□□ 0.05
SNX1-212ENST00000560861 CGNL1Q0VF96 1302 aa15.36■□□□□ 0.05
SNX1-212ENST00000560861 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
SNX1-212ENST00000560861 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
SNX1-212ENST00000560861 TMEM94Q12767 1356 aa15.35■□□□□ 0.05
SNX1-212ENST00000560861 DCCP43146 1447 aa15.34■□□□□ 0.05
SNX1-212ENST00000560861 IQSEC2Q5JU85 1478 aa15.34■□□□□ 0.05
SNX1-212ENST00000560861 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
SNX1-212ENST00000560861 CNGB1Q14028 1251 aaPredicted RBP15.34■□□□□ 0.05
SNX1-212ENST00000560861 PROSER2Q86WR7 435 aaPredicted RBP15.34■□□□□ 0.05
SNX1-212ENST00000560861 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
SNX1-212ENST00000560861 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
SNX1-212ENST00000560861 USP6P35125 1406 aa15.34■□□□□ 0.05
SNX1-212ENST00000560861 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
SNX1-212ENST00000560861 FYB1O15117 783 aa15.32■□□□□ 0.04
SNX1-212ENST00000560861 ACEP12821 1306 aa15.32■□□□□ 0.04
SNX1-212ENST00000560861 NUTM2FA1L443 756 aa15.31■□□□□ 0.04
SNX1-212ENST00000560861 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms