RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TRAK1Q9UPV9 953 aa22.05■■□□□ 1.12
SNRPA1-213ENST00000560856 C1orf167Q5SNV9 1468 aa22.04■■□□□ 1.12
SNRPA1-213ENST00000560856 KIAA1210Q9ULL0 1709 aa22.04■■□□□ 1.12
SNRPA1-213ENST00000560856 CDC42BPGQ6DT37 1551 aa22.03■■□□□ 1.12
SNRPA1-213ENST00000560856 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
SNRPA1-213ENST00000560856 SAFB2Q14151 953 aaKnown RBP eCLIP21.99■■□□□ 1.11
SNRPA1-213ENST00000560856 POGKQ9P215 609 aa21.99■■□□□ 1.11
SNRPA1-213ENST00000560856 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
SNRPA1-213ENST00000560856 ORAI2Q96SN7 254 aa21.98■■□□□ 1.11
SNRPA1-213ENST00000560856 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
SNRPA1-213ENST00000560856 PHLPP1O60346 1717 aa21.95■■□□□ 1.1
SNRPA1-213ENST00000560856 TONSLQ96HA7 1378 aa21.95■■□□□ 1.1
SNRPA1-213ENST00000560856 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
SNRPA1-213ENST00000560856 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
SNRPA1-213ENST00000560856 NUTM2FA1L443 756 aa21.93■■□□□ 1.1
SNRPA1-213ENST00000560856 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
SNRPA1-213ENST00000560856 FMN2Q9NZ56 1722 aa21.93■■□□□ 1.1
SNRPA1-213ENST00000560856 NHSL1Q5SYE7 1610 aa21.92■■□□□ 1.1
SNRPA1-213ENST00000560856 ADGRB2O60241 1585 aa21.92■■□□□ 1.1
SNRPA1-213ENST00000560856 MINK1Q8N4C8 1332 aaPredicted RBP21.92■■□□□ 1.1
SNRPA1-213ENST00000560856 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
SNRPA1-213ENST00000560856 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
SNRPA1-213ENST00000560856 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
SNRPA1-213ENST00000560856 GPRASP1Q5JY77 1395 aa21.89■■□□□ 1.1
SNRPA1-213ENST00000560856 JCADQ9P266 1359 aa21.89■■□□□ 1.1
SNRPA1-213ENST00000560856 SOS2Q07890 1332 aaPredicted RBP21.88■■□□□ 1.09
SNRPA1-213ENST00000560856 WASLO00401 505 aaPredicted RBP21.88■■□□□ 1.09
SNRPA1-213ENST00000560856 MED1Q15648 1581 aaPredicted RBP21.87■■□□□ 1.09
SNRPA1-213ENST00000560856 ROCK2O75116 1388 aaKnown RBP21.87■■□□□ 1.09
SNRPA1-213ENST00000560856 PRR36Q9H6K5 1346 aa21.85■■□□□ 1.09
SNRPA1-213ENST00000560856 USP32Q8NFA0 1604 aa21.85■■□□□ 1.09
SNRPA1-213ENST00000560856 ANKARQ7Z5J8 1434 aa21.85■■□□□ 1.09
SNRPA1-213ENST00000560856 FOXO3O43524 673 aa21.84■■□□□ 1.09
SNRPA1-213ENST00000560856 LRRC59Q96AG4 307 aaKnown RBP21.84■■□□□ 1.09
SNRPA1-213ENST00000560856 DISP3Q9P2K9 1392 aa21.84■■□□□ 1.09
SNRPA1-213ENST00000560856 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
SNRPA1-213ENST00000560856 CENPJQ9HC77 1338 aaPredicted RBP21.83■■□□□ 1.09
SNRPA1-213ENST00000560856 RALGAPBQ86X10 1494 aa21.83■■□□□ 1.08
SNRPA1-213ENST00000560856 NPHP3Q7Z494 1330 aa21.82■■□□□ 1.08
SNRPA1-213ENST00000560856 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
SNRPA1-213ENST00000560856 TULP4Q9NRJ4 1543 aa21.81■■□□□ 1.08
SNRPA1-213ENST00000560856 TIMELESSQ9UNS1 1208 aa21.81■■□□□ 1.08
SNRPA1-213ENST00000560856 PXDNQ92626 1479 aa21.81■■□□□ 1.08
SNRPA1-213ENST00000560856 SHPRHQ149N8 1683 aa21.8■■□□□ 1.08
SNRPA1-213ENST00000560856 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
SNRPA1-213ENST00000560856 EIF3AQ14152 1382 aaKnown RBP21.79■■□□□ 1.08
SNRPA1-213ENST00000560856 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
SNRPA1-213ENST00000560856 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
SNRPA1-213ENST00000560856 SPATA31A6Q5VVP1 1343 aa21.79■■□□□ 1.08
SNRPA1-213ENST00000560856 XPCQ01831 940 aaPredicted RBP21.78■■□□□ 1.08
SNRPA1-213ENST00000560856 CARD11Q9BXL7 1154 aa21.78■■□□□ 1.08
SNRPA1-213ENST00000560856 KIF1AQ12756 1690 aa21.78■■□□□ 1.08
SNRPA1-213ENST00000560856 NUDT16Q96DE0 195 aaKnown RBP21.77■■□□□ 1.08
SNRPA1-213ENST00000560856 ATP7BP35670 1465 aa21.77■■□□□ 1.07
SNRPA1-213ENST00000560856 LRP6O75581 1613 aa21.77■■□□□ 1.07
SNRPA1-213ENST00000560856 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
SNRPA1-213ENST00000560856 KRT28Q7Z3Y7 464 aa21.75■■□□□ 1.07
SNRPA1-213ENST00000560856 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
SNRPA1-213ENST00000560856 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
SNRPA1-213ENST00000560856 SPATA31A3Q5VYP0 1347 aa21.72■■□□□ 1.07
SNRPA1-213ENST00000560856 CABP2Q9NPB3 220 aa21.71■■□□□ 1.07
SNRPA1-213ENST00000560856 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
SNRPA1-213ENST00000560856 SBNO2Q9Y2G9 1366 aa21.7■■□□□ 1.06
SNRPA1-213ENST00000560856 PLEKHG3A1L390 1219 aa21.69■■□□□ 1.06
SNRPA1-213ENST00000560856 NUTM2BA6NNL0 878 aaPredicted RBP21.69■■□□□ 1.06
SNRPA1-213ENST00000560856 NUTM2EB1AL46 878 aaPredicted RBP21.69■■□□□ 1.06
SNRPA1-213ENST00000560856 PSME1Q06323 249 aa21.69■■□□□ 1.06
SNRPA1-213ENST00000560856 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
SNRPA1-213ENST00000560856 NUTM2AQ8IVF1 878 aaPredicted RBP21.69■■□□□ 1.06
SNRPA1-213ENST00000560856 SBNO1A3KN83 1393 aa21.69■■□□□ 1.06
SNRPA1-213ENST00000560856 SRPK2P78362 688 aaKnown RBP21.68■■□□□ 1.06
SNRPA1-213ENST00000560856 TOPAZ1Q8N9V7 1692 aa21.67■■□□□ 1.06
SNRPA1-213ENST00000560856 COL22A1Q8NFW1 1626 aaPredicted RBP21.67■■□□□ 1.06
SNRPA1-213ENST00000560856 EVC2Q86UK5 1308 aa21.67■■□□□ 1.06
SNRPA1-213ENST00000560856 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
SNRPA1-213ENST00000560856 POLR3AO14802 1390 aaPredicted RBP21.66■■□□□ 1.06
SNRPA1-213ENST00000560856 NGDNQ8NEJ9 315 aaKnown RBP21.66■■□□□ 1.06
SNRPA1-213ENST00000560856 TNS3Q68CZ2 1445 aa21.65■■□□□ 1.06
SNRPA1-213ENST00000560856 ITSN1Q15811 1721 aa21.65■■□□□ 1.06
SNRPA1-213ENST00000560856 TRPM3Q9HCF6 1732 aaPredicted RBP21.64■■□□□ 1.06
SNRPA1-213ENST00000560856 ACEP12821 1306 aa21.64■■□□□ 1.05
SNRPA1-213ENST00000560856 TESK2Q96S53 571 aa21.64■■□□□ 1.05
SNRPA1-213ENST00000560856 ST20-MTHFSA0A0A6YYL1 179 aa21.62■■□□□ 1.05
SNRPA1-213ENST00000560856 PPIP5K1Q6PFW1 1433 aa21.62■■□□□ 1.05
SNRPA1-213ENST00000560856 MEX3CQ5U5Q3 659 aaKnown RBP21.61■■□□□ 1.05
SNRPA1-213ENST00000560856 POTEAQ6S8J7 498 aa21.61■■□□□ 1.05
SNRPA1-213ENST00000560856 CABP1Q9NZU7 370 aa21.61■■□□□ 1.05
SNRPA1-213ENST00000560856 ADAMTS2O95450 1211 aa21.59■■□□□ 1.05
SNRPA1-213ENST00000560856 ARHGEF10O15013 1369 aa21.59■■□□□ 1.05
SNRPA1-213ENST00000560856 USP47Q96K76 1375 aa21.59■■□□□ 1.05
SNRPA1-213ENST00000560856 ALS2Q96Q42 1657 aa21.58■■□□□ 1.05
SNRPA1-213ENST00000560856 LMOD2Q6P5Q4 547 aa21.56■■□□□ 1.04
SNRPA1-213ENST00000560856 CABLES1Q8TDN4 633 aa21.56■■□□□ 1.04
SNRPA1-213ENST00000560856 C8orf37Q96NL8 207 aa21.56■■□□□ 1.04
SNRPA1-213ENST00000560856 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
SNRPA1-213ENST00000560856 AFF2P51816 1311 aa21.55■■□□□ 1.04
SNRPA1-213ENST00000560856 PUS7Q96PZ0 661 aaKnown RBP21.55■■□□□ 1.04
SNRPA1-213ENST00000560856 PAK3O75914 559 aaPredicted RBP21.53■■□□□ 1.04
SNRPA1-213ENST00000560856 FNBP4Q8N3X1 1017 aaPredicted RBP21.53■■□□□ 1.04
SNRPA1-213ENST00000560856 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms