RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 FMN2Q9NZ56 1722 aa16.61■□□□□ 0.25
GABPB1-210ENST00000560825 TECPR2O15040 1411 aa16.6■□□□□ 0.25
GABPB1-210ENST00000560825 MYOM2P54296 1465 aa16.6■□□□□ 0.25
GABPB1-210ENST00000560825 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
GABPB1-210ENST00000560825 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
GABPB1-210ENST00000560825 LRPPRCP42704 1394 aaKnown RBP16.59■□□□□ 0.25
GABPB1-210ENST00000560825 ADGRB1O14514 1584 aa16.57■□□□□ 0.24
GABPB1-210ENST00000560825 NUTM2FA1L443 756 aa16.57■□□□□ 0.24
GABPB1-210ENST00000560825 NUTM2BA6NNL0 878 aaPredicted RBP16.57■□□□□ 0.24
GABPB1-210ENST00000560825 NUTM2EB1AL46 878 aaPredicted RBP16.57■□□□□ 0.24
GABPB1-210ENST00000560825 NUTM2AQ8IVF1 878 aaPredicted RBP16.57■□□□□ 0.24
GABPB1-210ENST00000560825 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
GABPB1-210ENST00000560825 USP32Q8NFA0 1604 aa16.55■□□□□ 0.24
GABPB1-210ENST00000560825 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
GABPB1-210ENST00000560825 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
GABPB1-210ENST00000560825 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
GABPB1-210ENST00000560825 PXDNQ92626 1479 aa16.54■□□□□ 0.24
GABPB1-210ENST00000560825 DHX57Q6P158 1386 aaKnown RBP16.53■□□□□ 0.24
GABPB1-210ENST00000560825 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
GABPB1-210ENST00000560825 COL22A1Q8NFW1 1626 aaPredicted RBP16.53■□□□□ 0.24
GABPB1-210ENST00000560825 SOS2Q07890 1332 aaPredicted RBP16.52■□□□□ 0.24
GABPB1-210ENST00000560825 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
GABPB1-210ENST00000560825 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
GABPB1-210ENST00000560825 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
GABPB1-210ENST00000560825 SAFB2Q14151 953 aaKnown RBP eCLIP16.5■□□□□ 0.23
GABPB1-210ENST00000560825 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
GABPB1-210ENST00000560825 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
GABPB1-210ENST00000560825 LRRC59Q96AG4 307 aaKnown RBP16.49■□□□□ 0.23
GABPB1-210ENST00000560825 DCAF11Q8TEB1 546 aa16.48■□□□□ 0.23
GABPB1-210ENST00000560825 FOXO3O43524 673 aa16.47■□□□□ 0.23
GABPB1-210ENST00000560825 PRAM1Q96QH2 718 aa16.47■□□□□ 0.23
GABPB1-210ENST00000560825 AFF2P51816 1311 aa16.47■□□□□ 0.23
GABPB1-210ENST00000560825 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
GABPB1-210ENST00000560825 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
GABPB1-210ENST00000560825 ADGRB2O60241 1585 aa16.46■□□□□ 0.22
GABPB1-210ENST00000560825 ADAMTS2O95450 1211 aa16.45■□□□□ 0.22
GABPB1-210ENST00000560825 HRCP23327 699 aa16.45■□□□□ 0.22
GABPB1-210ENST00000560825 ABCA3Q99758 1704 aa16.45■□□□□ 0.22
GABPB1-210ENST00000560825 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-210ENST00000560825 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
GABPB1-210ENST00000560825 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
GABPB1-210ENST00000560825 HIRIP3Q9BW71 556 aaPredicted RBP16.44■□□□□ 0.22
GABPB1-210ENST00000560825 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
GABPB1-210ENST00000560825 TRPM3Q9HCF6 1732 aaPredicted RBP16.42■□□□□ 0.22
GABPB1-210ENST00000560825 SIRT1Q96EB6 747 aa16.42■□□□□ 0.22
GABPB1-210ENST00000560825 EP400Q96L91 3159 aa16.41■□□□□ 0.22
GABPB1-210ENST00000560825 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
GABPB1-210ENST00000560825 ZNF772Q68DY9 489 aaPredicted RBP16.4■□□□□ 0.22
GABPB1-210ENST00000560825 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.22
GABPB1-210ENST00000560825 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
GABPB1-210ENST00000560825 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
GABPB1-210ENST00000560825 RGS12O14924 1447 aa16.39■□□□□ 0.21
GABPB1-210ENST00000560825 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
GABPB1-210ENST00000560825 CRYBG1Q9Y4K1 1723 aa16.37■□□□□ 0.21
GABPB1-210ENST00000560825 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 NBPF1Q3BBV0 1214 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 PMFBP1Q8TBY8 1022 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 POGKQ9P215 609 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 RXRBP28702 533 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
GABPB1-210ENST00000560825 KRT28Q7Z3Y7 464 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
GABPB1-210ENST00000560825 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
GABPB1-210ENST00000560825 TOPAZ1Q8N9V7 1692 aa16.35■□□□□ 0.21
GABPB1-210ENST00000560825 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
GABPB1-210ENST00000560825 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
GABPB1-210ENST00000560825 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.21
GABPB1-210ENST00000560825 TNS3Q68CZ2 1445 aa16.33■□□□□ 0.2
GABPB1-210ENST00000560825 TRPM1Q7Z4N2 1603 aa16.33■□□□□ 0.2
GABPB1-210ENST00000560825 ITSN1Q15811 1721 aa16.33■□□□□ 0.2
GABPB1-210ENST00000560825 CDK12Q9NYV4 1490 aaPredicted RBP16.33■□□□□ 0.2
GABPB1-210ENST00000560825 ATRNO75882 1429 aa16.32■□□□□ 0.2
GABPB1-210ENST00000560825 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
GABPB1-210ENST00000560825 FNBP4Q8N3X1 1017 aaPredicted RBP16.32■□□□□ 0.2
GABPB1-210ENST00000560825 USP21Q9UK80 565 aa16.32■□□□□ 0.2
GABPB1-210ENST00000560825 ATP7BP35670 1465 aa16.32■□□□□ 0.2
GABPB1-210ENST00000560825 GLI3P10071 1580 aa16.32■□□□□ 0.2
GABPB1-210ENST00000560825 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
GABPB1-210ENST00000560825 QRICH2Q9H0J4 1663 aa16.31■□□□□ 0.2
GABPB1-210ENST00000560825 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
GABPB1-210ENST00000560825 UPF1Q92900 1129 aaKnown RBP eCLIP16.3■□□□□ 0.2
GABPB1-210ENST00000560825 NRAPQ86VF7 1730 aa16.3■□□□□ 0.2
GABPB1-210ENST00000560825 SLIT2O94813 1529 aa16.29■□□□□ 0.2
GABPB1-210ENST00000560825 RBM6P78332 1123 aaKnown RBP16.28■□□□□ 0.2
GABPB1-210ENST00000560825 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
GABPB1-210ENST00000560825 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.19
GABPB1-210ENST00000560825 NWD2Q9ULI1 1742 aa16.26■□□□□ 0.19
GABPB1-210ENST00000560825 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
GABPB1-210ENST00000560825 PSME1Q06323 249 aa16.26■□□□□ 0.19
GABPB1-210ENST00000560825 LMOD2Q6P5Q4 547 aa16.26■□□□□ 0.19
GABPB1-210ENST00000560825 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
GABPB1-210ENST00000560825 STAC3Q96MF2 364 aa16.25■□□□□ 0.19
GABPB1-210ENST00000560825 CDK19Q9BWU1 502 aa16.24■□□□□ 0.19
GABPB1-210ENST00000560825 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
GABPB1-210ENST00000560825 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms