RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 POGKQ9P215 609 aa17.07■□□□□ 0.32
RABGGTA-218ENST00000560777 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
RABGGTA-218ENST00000560777 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
RABGGTA-218ENST00000560777 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-218ENST00000560777 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-218ENST00000560777 DCCP43146 1447 aa17.04■□□□□ 0.32
RABGGTA-218ENST00000560777 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
RABGGTA-218ENST00000560777 GPRASP1Q5JY77 1395 aa17.03■□□□□ 0.32
RABGGTA-218ENST00000560777 CARD11Q9BXL7 1154 aa17.01■□□□□ 0.31
RABGGTA-218ENST00000560777 MST1RQ04912 1400 aa17.01■□□□□ 0.31
RABGGTA-218ENST00000560777 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
RABGGTA-218ENST00000560777 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
RABGGTA-218ENST00000560777 ARHGEF28Q8N1W1 1705 aaKnown RBP17■□□□□ 0.31
RABGGTA-218ENST00000560777 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
RABGGTA-218ENST00000560777 CENPJQ9HC77 1338 aaPredicted RBP16.97■□□□□ 0.31
RABGGTA-218ENST00000560777 NUTM2FA1L443 756 aa16.97■□□□□ 0.31
RABGGTA-218ENST00000560777 HSPA1LP34931 641 aa16.97■□□□□ 0.31
RABGGTA-218ENST00000560777 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
RABGGTA-218ENST00000560777 C1orf167Q5SNV9 1468 aa16.97■□□□□ 0.31
RABGGTA-218ENST00000560777 CDC42BPGQ6DT37 1551 aa16.97■□□□□ 0.31
RABGGTA-218ENST00000560777 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
RABGGTA-218ENST00000560777 ORAI2Q96SN7 254 aa16.96■□□□□ 0.31
RABGGTA-218ENST00000560777 ROBO1Q9Y6N7 1651 aa16.95■□□□□ 0.3
RABGGTA-218ENST00000560777 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
RABGGTA-218ENST00000560777 CDK19Q9BWU1 502 aa16.93■□□□□ 0.3
RABGGTA-218ENST00000560777 ADGRB2O60241 1585 aa16.93■□□□□ 0.3
RABGGTA-218ENST00000560777 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-218ENST00000560777 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
RABGGTA-218ENST00000560777 DDX17Q92841 729 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-218ENST00000560777 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
RABGGTA-218ENST00000560777 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.29
RABGGTA-218ENST00000560777 NUDT16Q96DE0 195 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-218ENST00000560777 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
RABGGTA-218ENST00000560777 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
RABGGTA-218ENST00000560777 FOXO3O43524 673 aa16.87■□□□□ 0.29
RABGGTA-218ENST00000560777 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
RABGGTA-218ENST00000560777 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
RABGGTA-218ENST00000560777 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-218ENST00000560777 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
RABGGTA-218ENST00000560777 SRPK2P78362 688 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-218ENST00000560777 TESK2Q96S53 571 aa16.86■□□□□ 0.29
RABGGTA-218ENST00000560777 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
RABGGTA-218ENST00000560777 USP47Q96K76 1375 aa16.86■□□□□ 0.29
RABGGTA-218ENST00000560777 SBNO2Q9Y2G9 1366 aa16.86■□□□□ 0.29
RABGGTA-218ENST00000560777 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
RABGGTA-218ENST00000560777 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
RABGGTA-218ENST00000560777 AHDC1Q5TGY3 1603 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-218ENST00000560777 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
RABGGTA-218ENST00000560777 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
RABGGTA-218ENST00000560777 ATP7BP35670 1465 aa16.83■□□□□ 0.28
RABGGTA-218ENST00000560777 SOS2Q07890 1332 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-218ENST00000560777 NHSL1Q5SYE7 1610 aa16.82■□□□□ 0.28
RABGGTA-218ENST00000560777 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
RABGGTA-218ENST00000560777 XPCQ01831 940 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-218ENST00000560777 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
RABGGTA-218ENST00000560777 LRRC59Q96AG4 307 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-218ENST00000560777 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-218ENST00000560777 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
RABGGTA-218ENST00000560777 PSME1Q06323 249 aa16.8■□□□□ 0.28
RABGGTA-218ENST00000560777 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
RABGGTA-218ENST00000560777 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
RABGGTA-218ENST00000560777 CABP1Q9NZU7 370 aa16.79■□□□□ 0.28
RABGGTA-218ENST00000560777 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
RABGGTA-218ENST00000560777 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-218ENST00000560777 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-218ENST00000560777 PUS7Q96PZ0 661 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-218ENST00000560777 PXDNQ92626 1479 aa16.78■□□□□ 0.28
RABGGTA-218ENST00000560777 JCADQ9P266 1359 aa16.77■□□□□ 0.28
RABGGTA-218ENST00000560777 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.27
RABGGTA-218ENST00000560777 ACEP12821 1306 aa16.76■□□□□ 0.27
RABGGTA-218ENST00000560777 TMF1P82094 1093 aa16.76■□□□□ 0.27
RABGGTA-218ENST00000560777 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-218ENST00000560777 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
RABGGTA-218ENST00000560777 DISP3Q9P2K9 1392 aa16.75■□□□□ 0.27
RABGGTA-218ENST00000560777 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
RABGGTA-218ENST00000560777 SPATA31A3Q5VYP0 1347 aa16.74■□□□□ 0.27
RABGGTA-218ENST00000560777 ITSN1Q15811 1721 aa16.74■□□□□ 0.27
RABGGTA-218ENST00000560777 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
RABGGTA-218ENST00000560777 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
RABGGTA-218ENST00000560777 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
RABGGTA-218ENST00000560777 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
RABGGTA-218ENST00000560777 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
RABGGTA-218ENST00000560777 CDCA8Q53HL2 280 aa16.7■□□□□ 0.26
RABGGTA-218ENST00000560777 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
RABGGTA-218ENST00000560777 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-218ENST00000560777 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-218ENST00000560777 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-218ENST00000560777 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-218ENST00000560777 LMOD2Q6P5Q4 547 aa16.68■□□□□ 0.26
RABGGTA-218ENST00000560777 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-218ENST00000560777 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-218ENST00000560777 TNS3Q68CZ2 1445 aa16.68■□□□□ 0.26
RABGGTA-218ENST00000560777 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-218ENST00000560777 TRPM3Q9HCF6 1732 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-218ENST00000560777 USP6P35125 1406 aa16.66■□□□□ 0.26
RABGGTA-218ENST00000560777 CD163L1Q9NR16 1453 aa16.66■□□□□ 0.26
RABGGTA-218ENST00000560777 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
RABGGTA-218ENST00000560777 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
RABGGTA-218ENST00000560777 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.26
RABGGTA-218ENST00000560777 LRP6O75581 1613 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 537 ms