RNA–Protein interactions for RNA: ENST00000560762.5

NIPA2-209, Transcript of NIPA magnesium transporter 2, human

TSL 5

Gene NIPA2, Length 534 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-209	ENST00000560762	PRAM1	Q96QH2	718 aa		31.55	■■■□□ 2.64
NIPA2-209	ENST00000560762	CDC42BPG	Q6DT37	1551 aa		31.55	■■■□□ 2.64
NIPA2-209	ENST00000560762	NBPF1	Q3BBV0	1214 aa		31.54	■■■□□ 2.64
NIPA2-209	ENST00000560762	CLSPN	Q9HAW4	1339 aa		31.5	■■■□□ 2.63
NIPA2-209	ENST00000560762	BRINP3	Q76B58	766 aa		31.5	■■■□□ 2.63
NIPA2-209	ENST00000560762	POGK	Q9P215	609 aa		31.5	■■■□□ 2.63
NIPA2-209	ENST00000560762	C1orf167	Q5SNV9	1468 aa		31.49	■■■□□ 2.63
NIPA2-209	ENST00000560762	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.48	■■■□□ 2.63
NIPA2-209	ENST00000560762	TRPM1	Q7Z4N2	1603 aa		31.48	■■■□□ 2.63
NIPA2-209	ENST00000560762	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.46	■■■□□ 2.63
NIPA2-209	ENST00000560762	NBPF8	Q3BBV2	869 aa		31.46	■■■□□ 2.63
NIPA2-209	ENST00000560762	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.42	■■■□□ 2.62
NIPA2-209	ENST00000560762	ADGRB2	O60241	1585 aa		31.42	■■■□□ 2.62
NIPA2-209	ENST00000560762	FMN2	Q9NZ56	1722 aa		31.41	■■■□□ 2.62
NIPA2-209	ENST00000560762	PHLPP1	O60346	1717 aa		31.4	■■■□□ 2.62
NIPA2-209	ENST00000560762	CCER1	Q8TC90	406 aa	Predicted RBP	31.39	■■■□□ 2.62
NIPA2-209	ENST00000560762	ORAI2	Q96SN7	254 aa		31.39	■■■□□ 2.62
NIPA2-209	ENST00000560762	ROCK2	O75116	1388 aa	Known RBP	31.39	■■■□□ 2.62
NIPA2-209	ENST00000560762	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.37	■■■□□ 2.61
NIPA2-209	ENST00000560762	COL16A1	Q07092	1604 aa	Predicted RBP	31.37	■■■□□ 2.61
NIPA2-209	ENST00000560762	GPRASP1	Q5JY77	1395 aa		31.36	■■■□□ 2.61
NIPA2-209	ENST00000560762	NHSL1	Q5SYE7	1610 aa		31.35	■■■□□ 2.61
NIPA2-209	ENST00000560762	NUTM2F	A1L443	756 aa		31.35	■■■□□ 2.61
NIPA2-209	ENST00000560762	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.35	■■■□□ 2.61
NIPA2-209	ENST00000560762	RALGAPB	Q86X10	1494 aa		31.33	■■■□□ 2.61
NIPA2-209	ENST00000560762	ESCO1	Q5FWF5	840 aa		31.32	■■■□□ 2.6
NIPA2-209	ENST00000560762	TIMELESS	Q9UNS1	1208 aa		31.31	■■■□□ 2.6
NIPA2-209	ENST00000560762	DDX17	Q92841	729 aa	Known RBP	31.3	■■■□□ 2.6
NIPA2-209	ENST00000560762	WASL	O00401	505 aa	Predicted RBP	31.29	■■■□□ 2.6
NIPA2-209	ENST00000560762	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.28	■■■□□ 2.6
NIPA2-209	ENST00000560762	ANKAR	Q7Z5J8	1434 aa		31.28	■■■□□ 2.6
NIPA2-209	ENST00000560762	USP32	Q8NFA0	1604 aa		31.26	■■■□□ 2.59
NIPA2-209	ENST00000560762	EIF3A	Q14152	1382 aa	Known RBP	31.26	■■■□□ 2.59
NIPA2-209	ENST00000560762	JCAD	Q9P266	1359 aa		31.26	■■■□□ 2.59
NIPA2-209	ENST00000560762	TULP4	Q9NRJ4	1543 aa		31.24	■■■□□ 2.59
NIPA2-209	ENST00000560762	CARD11	Q9BXL7	1154 aa		31.24	■■■□□ 2.59
NIPA2-209	ENST00000560762	RGPD8	O14715	1765 aa	Predicted RBP	31.23	■■■□□ 2.59
NIPA2-209	ENST00000560762	SOS2	Q07890	1332 aa	Predicted RBP	31.23	■■■□□ 2.59
NIPA2-209	ENST00000560762	KIF1A	Q12756	1690 aa		31.22	■■■□□ 2.59
NIPA2-209	ENST00000560762	QRICH2	Q9H0J4	1663 aa		31.22	■■■□□ 2.59
NIPA2-209	ENST00000560762	NPHP3	Q7Z494	1330 aa		31.22	■■■□□ 2.59
NIPA2-209	ENST00000560762	PRR36	Q9H6K5	1346 aa		31.22	■■■□□ 2.59
NIPA2-209	ENST00000560762	MED1	Q15648	1581 aa	Predicted RBP	31.21	■■■□□ 2.59
NIPA2-209	ENST00000560762	FOXO3	O43524	673 aa		31.2	■■■□□ 2.59
NIPA2-209	ENST00000560762	LRRC59	Q96AG4	307 aa	Known RBP	31.19	■■■□□ 2.58
NIPA2-209	ENST00000560762	CDK19	Q9BWU1	502 aa		31.19	■■■□□ 2.58
NIPA2-209	ENST00000560762	PHF8	Q9UPP1	1060 aa		31.19	■■■□□ 2.58
NIPA2-209	ENST00000560762	PXDN	Q92626	1479 aa		31.18	■■■□□ 2.58
NIPA2-209	ENST00000560762	SHPRH	Q149N8	1683 aa		31.17	■■■□□ 2.58
NIPA2-209	ENST00000560762	ATP7B	P35670	1465 aa		31.16	■■■□□ 2.58
NIPA2-209	ENST00000560762	NUDT16	Q96DE0	195 aa	Known RBP	31.13	■■■□□ 2.57
NIPA2-209	ENST00000560762	XPC	Q01831	940 aa	Predicted RBP	31.12	■■■□□ 2.57
NIPA2-209	ENST00000560762	SPATA31A6	Q5VVP1	1343 aa		31.12	■■■□□ 2.57
NIPA2-209	ENST00000560762	PNPLA6	Q8IY17	1366 aa		31.11	■■■□□ 2.57
NIPA2-209	ENST00000560762	PMFBP1	Q8TBY8	1022 aa		31.11	■■■□□ 2.57
NIPA2-209	ENST00000560762	DISP3	Q9P2K9	1392 aa		31.1	■■■□□ 2.57
NIPA2-209	ENST00000560762	SBNO2	Q9Y2G9	1366 aa		31.09	■■■□□ 2.57
NIPA2-209	ENST00000560762	ITSN1	Q15811	1721 aa		31.08	■■■□□ 2.57
NIPA2-209	ENST00000560762	SRPK2	P78362	688 aa	Known RBP	31.07	■■■□□ 2.56
NIPA2-209	ENST00000560762	KRT28	Q7Z3Y7	464 aa		31.07	■■■□□ 2.56
NIPA2-209	ENST00000560762	TOPAZ1	Q8N9V7	1692 aa		31.06	■■■□□ 2.56
NIPA2-209	ENST00000560762	EVC2	Q86UK5	1308 aa		31.06	■■■□□ 2.56
NIPA2-209	ENST00000560762	CABP2	Q9NPB3	220 aa		31.06	■■■□□ 2.56
NIPA2-209	ENST00000560762	CCDC61	Q9Y6R9	512 aa		31.06	■■■□□ 2.56
NIPA2-209	ENST00000560762	LRP6	O75581	1613 aa		31.05	■■■□□ 2.56
NIPA2-209	ENST00000560762	PSME1	Q06323	249 aa		31.03	■■■□□ 2.56
NIPA2-209	ENST00000560762	SPATA31A3	Q5VYP0	1347 aa		31.02	■■■□□ 2.56
NIPA2-209	ENST00000560762	NGDN	Q8NEJ9	315 aa	Known RBP	31.01	■■■□□ 2.55
NIPA2-209	ENST00000560762	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31	■■■□□ 2.55
NIPA2-209	ENST00000560762	SBNO1	A3KN83	1393 aa		31	■■■□□ 2.55
NIPA2-209	ENST00000560762	PLEKHG3	A1L390	1219 aa		30.99	■■■□□ 2.55
NIPA2-209	ENST00000560762	USP47	Q96K76	1375 aa		30.99	■■■□□ 2.55
NIPA2-209	ENST00000560762	POLR3A	O14802	1390 aa	Predicted RBP	30.98	■■■□□ 2.55
NIPA2-209	ENST00000560762	ST20-MTHFS	A0A0A6YYL1	179 aa		30.98	■■■□□ 2.55
NIPA2-209	ENST00000560762	NUTM2B	A6NNL0	878 aa	Predicted RBP	30.98	■■■□□ 2.55
NIPA2-209	ENST00000560762	NUTM2E	B1AL46	878 aa	Predicted RBP	30.98	■■■□□ 2.55
NIPA2-209	ENST00000560762	NUTM2A	Q8IVF1	878 aa	Predicted RBP	30.98	■■■□□ 2.55
NIPA2-209	ENST00000560762	TNS3	Q68CZ2	1445 aa		30.98	■■■□□ 2.55
NIPA2-209	ENST00000560762	PPIP5K1	Q6PFW1	1433 aa		30.98	■■■□□ 2.55
NIPA2-209	ENST00000560762	TESK2	Q96S53	571 aa		30.96	■■■□□ 2.55
NIPA2-209	ENST00000560762	PHF23	Q9BUL5	403 aa	Predicted RBP	30.96	■■■□□ 2.55
NIPA2-209	ENST00000560762	TRPM3	Q9HCF6	1732 aa	Predicted RBP	30.95	■■■□□ 2.55
NIPA2-209	ENST00000560762	ACE	P12821	1306 aa		30.95	■■■□□ 2.54
NIPA2-209	ENST00000560762	MEX3C	Q5U5Q3	659 aa	Known RBP	30.91	■■■□□ 2.54
NIPA2-209	ENST00000560762	CABP1	Q9NZU7	370 aa		30.91	■■■□□ 2.54
NIPA2-209	ENST00000560762	ATAD2	Q6PL18	1390 aa		30.91	■■■□□ 2.54
NIPA2-209	ENST00000560762	RGS17	Q9UGC6	210 aa	Predicted RBP	30.9	■■■□□ 2.54
NIPA2-209	ENST00000560762	ARHGEF10	O15013	1369 aa		30.9	■■■□□ 2.54
NIPA2-209	ENST00000560762	ALS2	Q96Q42	1657 aa		30.87	■■■□□ 2.53
NIPA2-209	ENST00000560762	SLC24A1	O60721	1099 aa		30.87	■■■□□ 2.53
NIPA2-209	ENST00000560762	LMOD2	Q6P5Q4	547 aa		30.86	■■■□□ 2.53
NIPA2-209	ENST00000560762	PUS7	Q96PZ0	661 aa	Known RBP	30.85	■■■□□ 2.53
NIPA2-209	ENST00000560762	PAK3	O75914	559 aa	Predicted RBP	30.84	■■■□□ 2.53
NIPA2-209	ENST00000560762	ADAMTS2	O95450	1211 aa		30.84	■■■□□ 2.53
NIPA2-209	ENST00000560762	USP6	P35125	1406 aa		30.81	■■■□□ 2.52
NIPA2-209	ENST00000560762	CABLES1	Q8TDN4	633 aa		30.8	■■■□□ 2.52
NIPA2-209	ENST00000560762	BRD4	O60885	1362 aa	Predicted RBP	30.79	■■■□□ 2.52
NIPA2-209	ENST00000560762	C8orf37	Q96NL8	207 aa		30.79	■■■□□ 2.52
NIPA2-209	ENST00000560762	ILDR2	Q71H61	639 aa		30.78	■■■□□ 2.52
NIPA2-209	ENST00000560762	CPSF1	Q10570	1443 aa	Known RBP	30.78	■■■□□ 2.52

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms