RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.31■□□□□ 0.04
TPM1-225ENST00000560679 KIF1BO60333 1816 aa15.3■□□□□ 0.04
TPM1-225ENST00000560679 CDC42BPGQ6DT37 1551 aa15.3■□□□□ 0.04
TPM1-225ENST00000560679 GLI3P10071 1580 aa15.28■□□□□ 0.04
TPM1-225ENST00000560679 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
TPM1-225ENST00000560679 RALGAPBQ86X10 1494 aa15.25■□□□□ 0.03
TPM1-225ENST00000560679 LRP5O75197 1615 aa15.25■□□□□ 0.03
TPM1-225ENST00000560679 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
TPM1-225ENST00000560679 PPLO60437 1756 aa15.24■□□□□ 0.03
TPM1-225ENST00000560679 SLIT2O94813 1529 aa15.23■□□□□ 0.03
TPM1-225ENST00000560679 FOXD1Q16676 465 aa15.23■□□□□ 0.03
TPM1-225ENST00000560679 CCDC125Q86Z20 511 aa15.23■□□□□ 0.03
TPM1-225ENST00000560679 BLMP54132 1417 aaPredicted RBP15.23■□□□□ 0.03
TPM1-225ENST00000560679 NPHP3Q7Z494 1330 aa15.22■□□□□ 0.03
TPM1-225ENST00000560679 ITGAEP38570 1179 aa15.22■□□□□ 0.03
TPM1-225ENST00000560679 GJD4Q96KN9 370 aaPredicted RBP15.22■□□□□ 0.03
TPM1-225ENST00000560679 USP32Q8NFA0 1604 aa15.21■□□□□ 0.03
TPM1-225ENST00000560679 XPCQ01831 940 aaPredicted RBP15.21■□□□□ 0.03
TPM1-225ENST00000560679 NAIPQ13075 1403 aa15.19■□□□□ 0.02
TPM1-225ENST00000560679 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
TPM1-225ENST00000560679 FOXO3O43524 673 aa15.18■□□□□ 0.02
TPM1-225ENST00000560679 DEFB132Q7Z7B7 95 aa15.18■□□□□ 0.02
TPM1-225ENST00000560679 PLCH1Q4KWH8 1693 aa15.18■□□□□ 0.02
TPM1-225ENST00000560679 TECPR2O15040 1411 aa15.17■□□□□ 0.02
TPM1-225ENST00000560679 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
TPM1-225ENST00000560679 FMN2Q9NZ56 1722 aa15.17■□□□□ 0.02
TPM1-225ENST00000560679 KIF1AQ12756 1690 aa15.17■□□□□ 0.02
TPM1-225ENST00000560679 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
TPM1-225ENST00000560679 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
TPM1-225ENST00000560679 UNC5CLQ8IV45 518 aa15.16■□□□□ 0.02
TPM1-225ENST00000560679 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
TPM1-225ENST00000560679 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
TPM1-225ENST00000560679 SPATA31A3Q5VYP0 1347 aa15.14■□□□□ 0.01
TPM1-225ENST00000560679 RPGRIP1LQ68CZ1 1315 aa15.14■□□□□ 0.01
TPM1-225ENST00000560679 LRPPRCP42704 1394 aaKnown RBP15.13■□□□□ 0.01
TPM1-225ENST00000560679 PLEKHH1Q9ULM0 1364 aa15.13■□□□□ 0.01
TPM1-225ENST00000560679 NUTM2FA1L443 756 aa15.13■□□□□ 0.01
TPM1-225ENST00000560679 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
TPM1-225ENST00000560679 TNS3Q68CZ2 1445 aa15.11■□□□□ 0.01
TPM1-225ENST00000560679 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
TPM1-225ENST00000560679 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
TPM1-225ENST00000560679 SEPT12Q8IYM1 358 aa15.11■□□□□ 0.01
TPM1-225ENST00000560679 NRAPQ86VF7 1730 aa15.11■□□□□ 0.01
TPM1-225ENST00000560679 ADGRF5Q8IZF2 1346 aa15.1■□□□□ 0.01
TPM1-225ENST00000560679 RGPD8O14715 1765 aaPredicted RBP15.09■□□□□ 0.01
TPM1-225ENST00000560679 VPS72Q15906 364 aa15.09■□□□□ 0.01
TPM1-225ENST00000560679 ABCC11Q96J66 1382 aa15.08■□□□□ 0
TPM1-225ENST00000560679 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
TPM1-225ENST00000560679 STK26Q9P289 416 aa15.07■□□□□ 0
TPM1-225ENST00000560679 PIK3C2GO75747 1445 aa15.07■□□□□ 0
TPM1-225ENST00000560679 SPATA31E1Q6ZUB1 1445 aa15.07■□□□□ 0
TPM1-225ENST00000560679 PSDA5PKW4 1024 aaPredicted RBP15.06■□□□□ 0
TPM1-225ENST00000560679 SF3B2Q13435 895 aaKnown RBP15.06■□□□□ 0
TPM1-225ENST00000560679 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
TPM1-225ENST00000560679 CABLES1Q8TDN4 633 aa15.06■□□□□ 0
TPM1-225ENST00000560679 NRXN1Q9ULB1 1477 aa15.06■□□□□ 0
TPM1-225ENST00000560679 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
TPM1-225ENST00000560679 HRCP23327 699 aa15.05■□□□□ -0
TPM1-225ENST00000560679 KRT28Q7Z3Y7 464 aa15.05■□□□□ -0
TPM1-225ENST00000560679 KRT27Q7Z3Y8 459 aa15.05■□□□□ -0
TPM1-225ENST00000560679 RGPD1P0DJD0 1748 aa15.05■□□□□ -0
TPM1-225ENST00000560679 YTHDC2Q9H6S0 1430 aaKnown RBP15.04■□□□□ -0
TPM1-225ENST00000560679 TMEM132EQ6IEE7 984 aa15.04■□□□□ -0
TPM1-225ENST00000560679 TRPM3Q9HCF6 1732 aaPredicted RBP15.03■□□□□ -0
TPM1-225ENST00000560679 SBNO1A3KN83 1393 aa15.03■□□□□ -0
TPM1-225ENST00000560679 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
TPM1-225ENST00000560679 THSD7AQ9UPZ6 1657 aa15.02□□□□□ -0.01
TPM1-225ENST00000560679 ANKRD30BQ9BXX2 1392 aa15.01□□□□□ -0.01
TPM1-225ENST00000560679 CRYBG1Q9Y4K1 1723 aa15.01□□□□□ -0.01
TPM1-225ENST00000560679 ALS2Q96Q42 1657 aa15.01□□□□□ -0.01
TPM1-225ENST00000560679 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
TPM1-225ENST00000560679 ARHGEF10O15013 1369 aa15□□□□□ -0.01
TPM1-225ENST00000560679 PLEKHG5O94827 1062 aa15□□□□□ -0.01
TPM1-225ENST00000560679 BAG6P46379 1132 aa15□□□□□ -0.01
TPM1-225ENST00000560679 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
TPM1-225ENST00000560679 PHF8Q9UPP1 1060 aa15□□□□□ -0.01
TPM1-225ENST00000560679 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
TPM1-225ENST00000560679 DISP2A7MBM2 1401 aa15□□□□□ -0.01
TPM1-225ENST00000560679 FAM83GA6ND36 823 aa14.99□□□□□ -0.01
TPM1-225ENST00000560679 FAM98CQ17RN3 349 aaKnown RBP14.99□□□□□ -0.01
TPM1-225ENST00000560679 ADGRB2O60241 1585 aa14.98□□□□□ -0.01
TPM1-225ENST00000560679 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
TPM1-225ENST00000560679 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
TPM1-225ENST00000560679 A0A0G2JS52 829 aa14.96□□□□□ -0.01
TPM1-225ENST00000560679 MYT1Q01538 1121 aa14.96□□□□□ -0.01
TPM1-225ENST00000560679 PSME1Q06323 249 aa14.96□□□□□ -0.01
TPM1-225ENST00000560679 R3HDM1Q15032 1099 aaKnown RBP14.96□□□□□ -0.01
TPM1-225ENST00000560679 FAM182BQ5T319 152 aa14.96□□□□□ -0.01
TPM1-225ENST00000560679 ANKARQ7Z5J8 1434 aa14.95□□□□□ -0.02
TPM1-225ENST00000560679 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
TPM1-225ENST00000560679 SIRT1Q96EB6 747 aa14.95□□□□□ -0.02
TPM1-225ENST00000560679 DLC1Q96QB1 1528 aa14.94□□□□□ -0.02
TPM1-225ENST00000560679 BTG4Q9NY30 223 aa14.94□□□□□ -0.02
TPM1-225ENST00000560679 RREB1Q92766 1687 aa14.93□□□□□ -0.02
TPM1-225ENST00000560679 SPATA31A5Q5VU36 1347 aa14.92□□□□□ -0.02
TPM1-225ENST00000560679 SPATA31A7Q8IWB4 1347 aa14.92□□□□□ -0.02
TPM1-225ENST00000560679 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
TPM1-225ENST00000560679 NUP188Q5SRE5 1749 aa14.92□□□□□ -0.02
TPM1-225ENST00000560679 SAFB2Q14151 953 aaKnown RBP eCLIP14.91□□□□□ -0.02
TPM1-225ENST00000560679 EZH2Q15910 746 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms