RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 WAPLQ7Z5K2 1190 aa23.85■■□□□ 1.41
SPG21-211ENST00000560564 DDX17Q92841 729 aaKnown RBP23.85■■□□□ 1.41
SPG21-211ENST00000560564 CFAP70Q5T0N1 1121 aa23.84■■□□□ 1.41
SPG21-211ENST00000560564 POTEAQ6S8J7 498 aa23.84■■□□□ 1.41
SPG21-211ENST00000560564 ORAI2Q96SN7 254 aa23.83■■□□□ 1.41
SPG21-211ENST00000560564 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
SPG21-211ENST00000560564 FMN2Q9NZ56 1722 aa23.81■■□□□ 1.4
SPG21-211ENST00000560564 SIRT1Q96EB6 747 aa23.81■■□□□ 1.4
SPG21-211ENST00000560564 SOS2Q07890 1332 aaPredicted RBP23.8■■□□□ 1.4
SPG21-211ENST00000560564 PNPLA6Q8IY17 1366 aa23.79■■□□□ 1.4
SPG21-211ENST00000560564 LRRC59Q96AG4 307 aaKnown RBP23.79■■□□□ 1.4
SPG21-211ENST00000560564 DLC1Q96QB1 1528 aa23.79■■□□□ 1.4
SPG21-211ENST00000560564 DHX57Q6P158 1386 aaKnown RBP23.78■■□□□ 1.4
SPG21-211ENST00000560564 PXDNQ92626 1479 aa23.74■■□□□ 1.39
SPG21-211ENST00000560564 DCAF11Q8TEB1 546 aa23.73■■□□□ 1.39
SPG21-211ENST00000560564 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
SPG21-211ENST00000560564 STAC3Q96MF2 364 aa23.72■■□□□ 1.39
SPG21-211ENST00000560564 COL22A1Q8NFW1 1626 aaPredicted RBP23.72■■□□□ 1.39
SPG21-211ENST00000560564 ESCO1Q5FWF5 840 aa23.71■■□□□ 1.39
SPG21-211ENST00000560564 KIF1AQ12756 1690 aa23.7■■□□□ 1.39
SPG21-211ENST00000560564 ADGRB2O60241 1585 aa23.7■■□□□ 1.38
SPG21-211ENST00000560564 NUTM2BA6NNL0 878 aaPredicted RBP23.7■■□□□ 1.38
SPG21-211ENST00000560564 NUTM2EB1AL46 878 aaPredicted RBP23.7■■□□□ 1.38
SPG21-211ENST00000560564 MEX3CQ5U5Q3 659 aaKnown RBP23.7■■□□□ 1.38
SPG21-211ENST00000560564 NUTM2AQ8IVF1 878 aaPredicted RBP23.7■■□□□ 1.38
SPG21-211ENST00000560564 KDM2AQ9Y2K7 1162 aa23.7■■□□□ 1.38
SPG21-211ENST00000560564 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
SPG21-211ENST00000560564 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
SPG21-211ENST00000560564 NUTM2FA1L443 756 aa23.68■■□□□ 1.38
SPG21-211ENST00000560564 USP32Q8NFA0 1604 aa23.67■■□□□ 1.38
SPG21-211ENST00000560564 ZNF772Q68DY9 489 aaPredicted RBP23.66■■□□□ 1.38
SPG21-211ENST00000560564 ARHGEF28Q8N1W1 1705 aaKnown RBP23.66■■□□□ 1.38
SPG21-211ENST00000560564 KIAA1210Q9ULL0 1709 aa23.65■■□□□ 1.38
SPG21-211ENST00000560564 FOXO3O43524 673 aa23.65■■□□□ 1.38
SPG21-211ENST00000560564 SAFB2Q14151 953 aaKnown RBP eCLIP23.63■■□□□ 1.37
SPG21-211ENST00000560564 TRAK1Q9UPV9 953 aa23.63■■□□□ 1.37
SPG21-211ENST00000560564 AFF2P51816 1311 aa23.62■■□□□ 1.37
SPG21-211ENST00000560564 XPCQ01831 940 aaPredicted RBP23.61■■□□□ 1.37
SPG21-211ENST00000560564 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
SPG21-211ENST00000560564 POGKQ9P215 609 aa23.6■■□□□ 1.37
SPG21-211ENST00000560564 MARF1Q9Y4F3 1742 aaKnown RBP23.59■■□□□ 1.37
SPG21-211ENST00000560564 C8orf37Q96NL8 207 aa23.58■■□□□ 1.37
SPG21-211ENST00000560564 PHF8Q9UPP1 1060 aa23.57■■□□□ 1.36
SPG21-211ENST00000560564 ADAMTS2O95450 1211 aa23.56■■□□□ 1.36
SPG21-211ENST00000560564 SPATA31A3Q5VYP0 1347 aa23.56■■□□□ 1.36
SPG21-211ENST00000560564 CDK12Q9NYV4 1490 aaPredicted RBP23.56■■□□□ 1.36
SPG21-211ENST00000560564 TULP4Q9NRJ4 1543 aa23.55■■□□□ 1.36
SPG21-211ENST00000560564 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
SPG21-211ENST00000560564 MINK1Q8N4C8 1332 aaPredicted RBP23.54■■□□□ 1.36
SPG21-211ENST00000560564 PRR36Q9H6K5 1346 aa23.54■■□□□ 1.36
SPG21-211ENST00000560564 KRT28Q7Z3Y7 464 aa23.52■■□□□ 1.36
SPG21-211ENST00000560564 TNS3Q68CZ2 1445 aa23.51■■□□□ 1.35
SPG21-211ENST00000560564 TRPM3Q9HCF6 1732 aaPredicted RBP23.51■■□□□ 1.35
SPG21-211ENST00000560564 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
SPG21-211ENST00000560564 RXRBP28702 533 aa23.51■■□□□ 1.35
SPG21-211ENST00000560564 FNBP4Q8N3X1 1017 aaPredicted RBP23.51■■□□□ 1.35
SPG21-211ENST00000560564 NGLY1Q96IV0 654 aa23.51■■□□□ 1.35
SPG21-211ENST00000560564 SBNO1A3KN83 1393 aa23.5■■□□□ 1.35
SPG21-211ENST00000560564 EIF3AQ14152 1382 aaKnown RBP23.5■■□□□ 1.35
SPG21-211ENST00000560564 ABCA3Q99758 1704 aa23.5■■□□□ 1.35
SPG21-211ENST00000560564 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
SPG21-211ENST00000560564 ATP7BP35670 1465 aa23.49■■□□□ 1.35
SPG21-211ENST00000560564 QTRT2Q9H974 415 aaKnown RBP23.48■■□□□ 1.35
SPG21-211ENST00000560564 ITSN1Q15811 1721 aa23.47■■□□□ 1.35
SPG21-211ENST00000560564 PMFBP1Q8TBY8 1022 aa23.47■■□□□ 1.35
SPG21-211ENST00000560564 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
SPG21-211ENST00000560564 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
SPG21-211ENST00000560564 ALS2Q96Q42 1657 aa23.47■■□□□ 1.35
SPG21-211ENST00000560564 RGS12O14924 1447 aa23.46■■□□□ 1.35
SPG21-211ENST00000560564 BCL9LQ86UU0 1499 aa23.46■■□□□ 1.35
SPG21-211ENST00000560564 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.45■■□□□ 1.34
SPG21-211ENST00000560564 RBM6P78332 1123 aaKnown RBP23.45■■□□□ 1.34
SPG21-211ENST00000560564 PSME1Q06323 249 aa23.45■■□□□ 1.34
SPG21-211ENST00000560564 USP21Q9UK80 565 aa23.45■■□□□ 1.34
SPG21-211ENST00000560564 TOPAZ1Q8N9V7 1692 aa23.44■■□□□ 1.34
SPG21-211ENST00000560564 ATRNO75882 1429 aa23.44■■□□□ 1.34
SPG21-211ENST00000560564 TRPM1Q7Z4N2 1603 aa23.44■■□□□ 1.34
SPG21-211ENST00000560564 SLIT2O94813 1529 aa23.42■■□□□ 1.34
SPG21-211ENST00000560564 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
SPG21-211ENST00000560564 CRYBG1Q9Y4K1 1723 aa23.4■■□□□ 1.34
SPG21-211ENST00000560564 TRPC5Q9UL62 973 aaPredicted RBP23.4■■□□□ 1.34
SPG21-211ENST00000560564 NUDT16Q96DE0 195 aaKnown RBP23.39■■□□□ 1.33
SPG21-211ENST00000560564 QRICH2Q9H0J4 1663 aa23.38■■□□□ 1.33
SPG21-211ENST00000560564 CABLES1Q8TDN4 633 aa23.38■■□□□ 1.33
SPG21-211ENST00000560564 CDK19Q9BWU1 502 aa23.37■■□□□ 1.33
SPG21-211ENST00000560564 PLCH1Q4KWH8 1693 aa23.37■■□□□ 1.33
SPG21-211ENST00000560564 GPRASP1Q5JY77 1395 aa23.37■■□□□ 1.33
SPG21-211ENST00000560564 NWD2Q9ULI1 1742 aa23.36■■□□□ 1.33
SPG21-211ENST00000560564 EP400Q96L91 3159 aa23.36■■□□□ 1.33
SPG21-211ENST00000560564 UPF1Q92900 1129 aaKnown RBP eCLIP23.36■■□□□ 1.33
SPG21-211ENST00000560564 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
SPG21-211ENST00000560564 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
SPG21-211ENST00000560564 POLR3AO14802 1390 aaPredicted RBP23.34■■□□□ 1.33
SPG21-211ENST00000560564 GLI3P10071 1580 aa23.33■■□□□ 1.33
SPG21-211ENST00000560564 LMOD2Q6P5Q4 547 aa23.33■■□□□ 1.33
SPG21-211ENST00000560564 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.33
SPG21-211ENST00000560564 UNC5CLQ8IV45 518 aa23.31■■□□□ 1.32
SPG21-211ENST00000560564 CCDC61Q9Y6R9 512 aa23.31■■□□□ 1.32
SPG21-211ENST00000560564 PLEKHG3A1L390 1219 aa23.3■■□□□ 1.32
SPG21-211ENST00000560564 TRIM26Q12899 539 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms