RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 C3P01024 1663 aa12.06□□□□□ -0.48
ACTC1-203ENST00000560563 PREX1Q8TCU6 1659 aa12.06□□□□□ -0.48
ACTC1-203ENST00000560563 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
ACTC1-203ENST00000560563 SLC52A1Q9NWF4 448 aa12.05□□□□□ -0.48
ACTC1-203ENST00000560563 SYNMO15061 1565 aa12.05□□□□□ -0.48
ACTC1-203ENST00000560563 PTPRMP28827 1452 aa12.04□□□□□ -0.48
ACTC1-203ENST00000560563 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
ACTC1-203ENST00000560563 TNRQ92752 1358 aa12.04□□□□□ -0.48
ACTC1-203ENST00000560563 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
ACTC1-203ENST00000560563 IDI1Q13907 227 aa12.03□□□□□ -0.48
ACTC1-203ENST00000560563 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
ACTC1-203ENST00000560563 UGGT1Q9NYU2 1555 aa12.03□□□□□ -0.48
ACTC1-203ENST00000560563 CLTCL1P53675 1640 aa12.03□□□□□ -0.48
ACTC1-203ENST00000560563 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
ACTC1-203ENST00000560563 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
ACTC1-203ENST00000560563 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
ACTC1-203ENST00000560563 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
ACTC1-203ENST00000560563 PIK3C2BO00750 1634 aa12.01□□□□□ -0.49
ACTC1-203ENST00000560563 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
ACTC1-203ENST00000560563 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
ACTC1-203ENST00000560563 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
ACTC1-203ENST00000560563 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
ACTC1-203ENST00000560563 SPATA31E1Q6ZUB1 1445 aa12□□□□□ -0.49
ACTC1-203ENST00000560563 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
ACTC1-203ENST00000560563 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
ACTC1-203ENST00000560563 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
ACTC1-203ENST00000560563 NEURL4Q96JN8 1562 aa11.98□□□□□ -0.49
ACTC1-203ENST00000560563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.98□□□□□ -0.49
ACTC1-203ENST00000560563 RGL3Q3MIN7 710 aa11.98□□□□□ -0.49
ACTC1-203ENST00000560563 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
ACTC1-203ENST00000560563 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
ACTC1-203ENST00000560563 ADGRB3O60242 1522 aa11.97□□□□□ -0.49
ACTC1-203ENST00000560563 G3V3G9 751 aa11.96□□□□□ -0.49
ACTC1-203ENST00000560563 TMEM131LA2VDJ0 1609 aa11.96□□□□□ -0.5
ACTC1-203ENST00000560563 KIF1BO60333 1816 aa11.95□□□□□ -0.5
ACTC1-203ENST00000560563 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
ACTC1-203ENST00000560563 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
ACTC1-203ENST00000560563 A2ML1A8K2U0 1454 aa11.95□□□□□ -0.5
ACTC1-203ENST00000560563 MYO3AQ8NEV4 1616 aa11.94□□□□□ -0.5
ACTC1-203ENST00000560563 RPGRIP1LQ68CZ1 1315 aa11.94□□□□□ -0.5
ACTC1-203ENST00000560563 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
ACTC1-203ENST00000560563 ST18O60284 1047 aa11.93□□□□□ -0.5
ACTC1-203ENST00000560563 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
ACTC1-203ENST00000560563 ECM2O94769 699 aaPredicted RBP11.93□□□□□ -0.5
ACTC1-203ENST00000560563 DCAF11Q8TEB1 546 aa11.93□□□□□ -0.5
ACTC1-203ENST00000560563 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
ACTC1-203ENST00000560563 UHRF1BP1Q6BDS2 1440 aa11.93□□□□□ -0.5
ACTC1-203ENST00000560563 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
ACTC1-203ENST00000560563 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
ACTC1-203ENST00000560563 KDM5AP29375 1690 aaKnown RBP11.92□□□□□ -0.5
ACTC1-203ENST00000560563 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
ACTC1-203ENST00000560563 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
ACTC1-203ENST00000560563 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
ACTC1-203ENST00000560563 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
ACTC1-203ENST00000560563 NEXMIFQ5QGS0 1516 aa11.9□□□□□ -0.5
ACTC1-203ENST00000560563 TMEM2Q9UHN6 1383 aa11.9□□□□□ -0.5
ACTC1-203ENST00000560563 RIMS2Q9UQ26 1411 aa11.89□□□□□ -0.51
ACTC1-203ENST00000560563 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
ACTC1-203ENST00000560563 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
ACTC1-203ENST00000560563 MYOM2P54296 1465 aa11.89□□□□□ -0.51
ACTC1-203ENST00000560563 MYO5BQ9ULV0 1848 aa11.88□□□□□ -0.51
ACTC1-203ENST00000560563 ZFYVE9O95405 1425 aa11.88□□□□□ -0.51
ACTC1-203ENST00000560563 SNPHO15079 494 aa11.88□□□□□ -0.51
ACTC1-203ENST00000560563 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
ACTC1-203ENST00000560563 NUTM2DQ5VT03 806 aaPredicted RBP11.88□□□□□ -0.51
ACTC1-203ENST00000560563 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.88□□□□□ -0.51
ACTC1-203ENST00000560563 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
ACTC1-203ENST00000560563 ARHGAP23Q9P227 1491 aa11.88□□□□□ -0.51
ACTC1-203ENST00000560563 ADGRF5Q8IZF2 1346 aa11.87□□□□□ -0.51
ACTC1-203ENST00000560563 SLIT1O75093 1534 aa11.87□□□□□ -0.51
ACTC1-203ENST00000560563 PPLO60437 1756 aa11.87□□□□□ -0.51
ACTC1-203ENST00000560563 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
ACTC1-203ENST00000560563 LTKP29376 864 aa11.86□□□□□ -0.51
ACTC1-203ENST00000560563 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
ACTC1-203ENST00000560563 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
ACTC1-203ENST00000560563 NRXN1Q9ULB1 1477 aa11.86□□□□□ -0.51
ACTC1-203ENST00000560563 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
ACTC1-203ENST00000560563 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
ACTC1-203ENST00000560563 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
ACTC1-203ENST00000560563 LMTK3Q96Q04 1460 aa11.84□□□□□ -0.51
ACTC1-203ENST00000560563 SOX12O15370 315 aa11.84□□□□□ -0.51
ACTC1-203ENST00000560563 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
ACTC1-203ENST00000560563 PIK3C2GO75747 1445 aa11.84□□□□□ -0.51
ACTC1-203ENST00000560563 ANKLE2Q86XL3 938 aa11.83□□□□□ -0.52
ACTC1-203ENST00000560563 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
ACTC1-203ENST00000560563 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
ACTC1-203ENST00000560563 STK25O00506 426 aa11.82□□□□□ -0.52
ACTC1-203ENST00000560563 RGL2O15211 777 aa11.82□□□□□ -0.52
ACTC1-203ENST00000560563 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
ACTC1-203ENST00000560563 C14orf93Q9H972 538 aaKnown RBP11.82□□□□□ -0.52
ACTC1-203ENST00000560563 PLEKHG1Q9ULL1 1385 aa11.81□□□□□ -0.52
ACTC1-203ENST00000560563 HSPA2P54652 639 aa11.81□□□□□ -0.52
ACTC1-203ENST00000560563 CFAP70Q5T0N1 1121 aa11.81□□□□□ -0.52
ACTC1-203ENST00000560563 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
ACTC1-203ENST00000560563 NBPF1Q3BBV0 1214 aa11.8□□□□□ -0.52
ACTC1-203ENST00000560563 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
ACTC1-203ENST00000560563 TRPM1Q7Z4N2 1603 aa11.79□□□□□ -0.52
ACTC1-203ENST00000560563 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
ACTC1-203ENST00000560563 BCANQ96GW7 911 aa11.79□□□□□ -0.52
ACTC1-203ENST00000560563 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms