RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 TTC24A2A3L6 582 aaPredicted RBP8.79□□□□□ -1
SPG11-222ENST00000560435 C11orf95C9JLR9 678 aaPredicted RBP8.79□□□□□ -1
SPG11-222ENST00000560435 WNT7AO00755 349 aa8.78□□□□□ -1
SPG11-222ENST00000560435 Q3C1V9 767 aa8.78□□□□□ -1
SPG11-222ENST00000560435 WFS1O76024 890 aa8.77□□□□□ -1.01
SPG11-222ENST00000560435 MMP16P51512 607 aa8.77□□□□□ -1.01
SPG11-222ENST00000560435 TRIM32Q13049 653 aa8.77□□□□□ -1.01
SPG11-222ENST00000560435 SNIP1Q8TAD8 396 aaKnown RBP8.77□□□□□ -1.01
SPG11-222ENST00000560435 GPIHBP1Q8IV16 184 aa8.76□□□□□ -1.01
SPG11-222ENST00000560435 SMPD1P17405 629 aa8.75□□□□□ -1.01
SPG11-222ENST00000560435 CD46P15529 392 aa8.74□□□□□ -1.01
SPG11-222ENST00000560435 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
SPG11-222ENST00000560435 NFX1Q12986 1120 aaKnown RBP8.73□□□□□ -1.01
SPG11-222ENST00000560435 MRGPRX2Q96LB1 330 aa8.73□□□□□ -1.01
SPG11-222ENST00000560435 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
SPG11-222ENST00000560435 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
SPG11-222ENST00000560435 REPIN1Q9BWE0 567 aaKnown RBP8.72□□□□□ -1.01
SPG11-222ENST00000560435 J3QL48 77 aa8.7□□□□□ -1.02
SPG11-222ENST00000560435 WIPF1O43516 503 aa8.7□□□□□ -1.02
SPG11-222ENST00000560435 KDM4AO75164 1064 aa8.7□□□□□ -1.02
SPG11-222ENST00000560435 USP46P62068 366 aa8.69□□□□□ -1.02
SPG11-222ENST00000560435 MAP2K5Q13163 448 aa8.69□□□□□ -1.02
SPG11-222ENST00000560435 TRIM47Q96LD4 638 aa8.69□□□□□ -1.02
SPG11-222ENST00000560435 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
SPG11-222ENST00000560435 STK17AQ9UEE5 414 aa8.69□□□□□ -1.02
SPG11-222ENST00000560435 PLCB2Q00722 1185 aa8.68□□□□□ -1.02
SPG11-222ENST00000560435 SNRPBP14678 240 aaKnown RBP8.67□□□□□ -1.02
SPG11-222ENST00000560435 WNT7BP56706 349 aa8.67□□□□□ -1.02
SPG11-222ENST00000560435 INSM1Q01101 510 aaPredicted RBP8.67□□□□□ -1.02
SPG11-222ENST00000560435 HPS1Q92902 700 aa8.66□□□□□ -1.02
SPG11-222ENST00000560435 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
SPG11-222ENST00000560435 HOXA2O43364 376 aa8.65□□□□□ -1.02
SPG11-222ENST00000560435 SKOR1P84550 965 aa8.65□□□□□ -1.02
SPG11-222ENST00000560435 RC3H1Q5TC82 1133 aaKnown RBP8.65□□□□□ -1.02
SPG11-222ENST00000560435 CCDC24Q8N4L8 307 aa8.65□□□□□ -1.02
SPG11-222ENST00000560435 HLA-CQ95604 372 aa8.65□□□□□ -1.02
SPG11-222ENST00000560435 KIFC2Q96AC6 838 aa8.65□□□□□ -1.02
SPG11-222ENST00000560435 IRF6O14896 467 aa8.63□□□□□ -1.03
SPG11-222ENST00000560435 JUNDP17535 347 aa8.63□□□□□ -1.03
SPG11-222ENST00000560435 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
SPG11-222ENST00000560435 LCE2CQ5TA81 110 aa8.63□□□□□ -1.03
SPG11-222ENST00000560435 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
SPG11-222ENST00000560435 GUCA2AQ02747 115 aa8.6□□□□□ -1.03
SPG11-222ENST00000560435 ALDH1A1P00352 501 aa8.59□□□□□ -1.03
SPG11-222ENST00000560435 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
SPG11-222ENST00000560435 GPCPD1Q9NPB8 672 aa8.58□□□□□ -1.04
SPG11-222ENST00000560435 TULP1O00294 542 aaPredicted RBP8.57□□□□□ -1.04
SPG11-222ENST00000560435 SIAH2O43255 324 aa8.57□□□□□ -1.04
SPG11-222ENST00000560435 CLCN1P35523 988 aa8.57□□□□□ -1.04
SPG11-222ENST00000560435 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
SPG11-222ENST00000560435 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
SPG11-222ENST00000560435 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
SPG11-222ENST00000560435 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
SPG11-222ENST00000560435 PTCRAQ6ISU1 281 aaPredicted RBP8.55□□□□□ -1.04
SPG11-222ENST00000560435 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
SPG11-222ENST00000560435 SLC16A10Q8TF71 515 aa8.55□□□□□ -1.04
SPG11-222ENST00000560435 NUTM1Q86Y26 1132 aa8.54□□□□□ -1.04
SPG11-222ENST00000560435 TRIM46Q7Z4K8 759 aa8.53□□□□□ -1.04
SPG11-222ENST00000560435 NXF1Q9UBU9 619 aaKnown RBP8.53□□□□□ -1.04
SPG11-222ENST00000560435 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
SPG11-222ENST00000560435 CAPN5O15484 640 aaPredicted RBP8.52□□□□□ -1.05
SPG11-222ENST00000560435 CCNYL3P0C7X3 344 aa8.52□□□□□ -1.05
SPG11-222ENST00000560435 FDX1P10109 184 aa8.52□□□□□ -1.05
SPG11-222ENST00000560435 BMP1P13497 986 aa8.52□□□□□ -1.05
SPG11-222ENST00000560435 NPAS3Q8IXF0 933 aa8.52□□□□□ -1.05
SPG11-222ENST00000560435 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
SPG11-222ENST00000560435 MS4A1P11836 297 aa8.51□□□□□ -1.05
SPG11-222ENST00000560435 HAP1P54257 671 aaPredicted RBP8.51□□□□□ -1.05
SPG11-222ENST00000560435 SH3BP2P78314 561 aa8.51□□□□□ -1.05
SPG11-222ENST00000560435 PTPRNQ16849 979 aa8.5□□□□□ -1.05
SPG11-222ENST00000560435 PCDHGC3Q9UN70 934 aa8.5□□□□□ -1.05
SPG11-222ENST00000560435 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
SPG11-222ENST00000560435 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
SPG11-222ENST00000560435 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
SPG11-222ENST00000560435 GMPRP36959 345 aa8.48□□□□□ -1.05
SPG11-222ENST00000560435 IRF7Q92985 503 aa8.48□□□□□ -1.05
SPG11-222ENST00000560435 UNC93B1Q9H1C4 597 aa8.48□□□□□ -1.05
SPG11-222ENST00000560435 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
SPG11-222ENST00000560435 H3BM21 787 aa8.46□□□□□ -1.06
SPG11-222ENST00000560435 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
SPG11-222ENST00000560435 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
SPG11-222ENST00000560435 KCNH2Q12809 1159 aa8.45□□□□□ -1.06
SPG11-222ENST00000560435 MPNDQ8N594 471 aa8.45□□□□□ -1.06
SPG11-222ENST00000560435 ZSCAN1Q8NBB4 408 aa8.45□□□□□ -1.06
SPG11-222ENST00000560435 TLL2Q9Y6L7 1015 aa8.45□□□□□ -1.06
SPG11-222ENST00000560435 PLEKHG3A1L390 1219 aa8.44□□□□□ -1.06
SPG11-222ENST00000560435 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
SPG11-222ENST00000560435 SSTR3P32745 418 aaPredicted RBP8.44□□□□□ -1.06
SPG11-222ENST00000560435 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
SPG11-222ENST00000560435 DESI1Q6ICB0 168 aa8.44□□□□□ -1.06
SPG11-222ENST00000560435 ZNF511Q8NB15 262 aa8.44□□□□□ -1.06
SPG11-222ENST00000560435 BAP1Q92560 729 aa8.44□□□□□ -1.06
SPG11-222ENST00000560435 ZFP42Q96MM3 310 aa8.44□□□□□ -1.06
SPG11-222ENST00000560435 VEGFBP49765 207 aa8.43□□□□□ -1.06
SPG11-222ENST00000560435 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
SPG11-222ENST00000560435 MOXD2PA6NHM9 499 aa8.42□□□□□ -1.06
SPG11-222ENST00000560435 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
SPG11-222ENST00000560435 NDUFV2P19404 249 aa8.42□□□□□ -1.06
SPG11-222ENST00000560435 NNTQ13423 1086 aa8.42□□□□□ -1.06
SPG11-222ENST00000560435 ERBB4Q15303 1308 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms