RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SOS2Q07890 1332 aaPredicted RBP22.24■■□□□ 1.15
SNRPA1-210ENST00000560383 DDX17Q92841 729 aaKnown RBP22.23■■□□□ 1.15
SNRPA1-210ENST00000560383 COL22A1Q8NFW1 1626 aaPredicted RBP22.22■■□□□ 1.15
SNRPA1-210ENST00000560383 YTHDC2Q9H6S0 1430 aaKnown RBP22.22■■□□□ 1.15
SNRPA1-210ENST00000560383 FMN2Q9NZ56 1722 aa22.21■■□□□ 1.15
SNRPA1-210ENST00000560383 ORAI2Q96SN7 254 aa22.21■■□□□ 1.15
SNRPA1-210ENST00000560383 NUTM2BA6NNL0 878 aaPredicted RBP22.2■■□□□ 1.14
SNRPA1-210ENST00000560383 NUTM2EB1AL46 878 aaPredicted RBP22.2■■□□□ 1.14
SNRPA1-210ENST00000560383 NUTM2AQ8IVF1 878 aaPredicted RBP22.2■■□□□ 1.14
SNRPA1-210ENST00000560383 C14orf93Q9H972 538 aaKnown RBP22.2■■□□□ 1.14
SNRPA1-210ENST00000560383 CDK12Q9NYV4 1490 aaPredicted RBP22.2■■□□□ 1.14
SNRPA1-210ENST00000560383 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
SNRPA1-210ENST00000560383 KIF1AQ12756 1690 aa22.17■■□□□ 1.14
SNRPA1-210ENST00000560383 PXDNQ92626 1479 aa22.17■■□□□ 1.14
SNRPA1-210ENST00000560383 NPHP3Q7Z494 1330 aa22.17■■□□□ 1.14
SNRPA1-210ENST00000560383 SIRT1Q96EB6 747 aa22.17■■□□□ 1.14
SNRPA1-210ENST00000560383 STK26Q9P289 416 aa22.17■■□□□ 1.14
SNRPA1-210ENST00000560383 AFF2P51816 1311 aa22.16■■□□□ 1.14
SNRPA1-210ENST00000560383 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
SNRPA1-210ENST00000560383 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
SNRPA1-210ENST00000560383 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
SNRPA1-210ENST00000560383 PLEKHH1Q9ULM0 1364 aa22.14■■□□□ 1.14
SNRPA1-210ENST00000560383 DLC1Q96QB1 1528 aa22.14■■□□□ 1.13
SNRPA1-210ENST00000560383 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
SNRPA1-210ENST00000560383 ESCO1Q5FWF5 840 aa22.13■■□□□ 1.13
SNRPA1-210ENST00000560383 CFAP70Q5T0N1 1121 aa22.13■■□□□ 1.13
SNRPA1-210ENST00000560383 RXRBP28702 533 aa22.12■■□□□ 1.13
SNRPA1-210ENST00000560383 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
SNRPA1-210ENST00000560383 C8orf37Q96NL8 207 aa22.11■■□□□ 1.13
SNRPA1-210ENST00000560383 ADGRB1O14514 1584 aa22.11■■□□□ 1.13
SNRPA1-210ENST00000560383 MARF1Q9Y4F3 1742 aaKnown RBP22.11■■□□□ 1.13
SNRPA1-210ENST00000560383 ADGRB2O60241 1585 aa22.1■■□□□ 1.13
SNRPA1-210ENST00000560383 KDM2AQ9Y2K7 1162 aa22.07■■□□□ 1.12
SNRPA1-210ENST00000560383 RGPD8O14715 1765 aaPredicted RBP22.07■■□□□ 1.12
SNRPA1-210ENST00000560383 FOXO3O43524 673 aa22.06■■□□□ 1.12
SNRPA1-210ENST00000560383 ADAMTS2O95450 1211 aa22.05■■□□□ 1.12
SNRPA1-210ENST00000560383 RBM6P78332 1123 aaKnown RBP22.04■■□□□ 1.12
SNRPA1-210ENST00000560383 NGLY1Q96IV0 654 aa22.04■■□□□ 1.12
SNRPA1-210ENST00000560383 RGS12O14924 1447 aa22.04■■□□□ 1.12
SNRPA1-210ENST00000560383 NUTM2FA1L443 756 aa22.03■■□□□ 1.12
SNRPA1-210ENST00000560383 QTRT2Q9H974 415 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-210ENST00000560383 ANKARQ7Z5J8 1434 aa22.03■■□□□ 1.12
SNRPA1-210ENST00000560383 FNBP4Q8N3X1 1017 aaPredicted RBP22.02■■□□□ 1.12
SNRPA1-210ENST00000560383 PRAM1Q96QH2 718 aa22.02■■□□□ 1.12
SNRPA1-210ENST00000560383 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.01■■□□□ 1.11
SNRPA1-210ENST00000560383 USP32Q8NFA0 1604 aa22.01■■□□□ 1.11
SNRPA1-210ENST00000560383 XPCQ01831 940 aaPredicted RBP21.99■■□□□ 1.11
SNRPA1-210ENST00000560383 UPF1Q92900 1129 aaKnown RBP eCLIP21.99■■□□□ 1.11
SNRPA1-210ENST00000560383 USP21Q9UK80 565 aa21.99■■□□□ 1.11
SNRPA1-210ENST00000560383 SPATA31A3Q5VYP0 1347 aa21.99■■□□□ 1.11
SNRPA1-210ENST00000560383 ATRNO75882 1429 aa21.98■■□□□ 1.11
SNRPA1-210ENST00000560383 TRPC5Q9UL62 973 aaPredicted RBP21.98■■□□□ 1.11
SNRPA1-210ENST00000560383 TNS3Q68CZ2 1445 aa21.97■■□□□ 1.11
SNRPA1-210ENST00000560383 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
SNRPA1-210ENST00000560383 POGKQ9P215 609 aa21.97■■□□□ 1.11
SNRPA1-210ENST00000560383 PHF8Q9UPP1 1060 aa21.97■■□□□ 1.11
SNRPA1-210ENST00000560383 EIF3AQ14152 1382 aaKnown RBP21.97■■□□□ 1.11
SNRPA1-210ENST00000560383 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
SNRPA1-210ENST00000560383 KIAA1210Q9ULL0 1709 aa21.96■■□□□ 1.11
SNRPA1-210ENST00000560383 SBNO1A3KN83 1393 aa21.96■■□□□ 1.11
SNRPA1-210ENST00000560383 BCL9LQ86UU0 1499 aa21.96■■□□□ 1.11
SNRPA1-210ENST00000560383 TULP4Q9NRJ4 1543 aa21.96■■□□□ 1.11
SNRPA1-210ENST00000560383 ABCA3Q99758 1704 aa21.95■■□□□ 1.1
SNRPA1-210ENST00000560383 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
SNRPA1-210ENST00000560383 KRT28Q7Z3Y7 464 aa21.94■■□□□ 1.1
SNRPA1-210ENST00000560383 L3MBTL2Q969R5 705 aa21.94■■□□□ 1.1
SNRPA1-210ENST00000560383 TRAK1Q9UPV9 953 aa21.94■■□□□ 1.1
SNRPA1-210ENST00000560383 PSME1Q06323 249 aa21.93■■□□□ 1.1
SNRPA1-210ENST00000560383 EP400Q96L91 3159 aa21.93■■□□□ 1.1
SNRPA1-210ENST00000560383 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
SNRPA1-210ENST00000560383 SLIT2O94813 1529 aa21.91■■□□□ 1.1
SNRPA1-210ENST00000560383 ARHGEF10O15013 1369 aa21.91■■□□□ 1.1
SNRPA1-210ENST00000560383 ITSN1Q15811 1721 aa21.91■■□□□ 1.1
SNRPA1-210ENST00000560383 NWD2Q9ULI1 1742 aa21.9■■□□□ 1.1
SNRPA1-210ENST00000560383 ALS2Q96Q42 1657 aa21.88■■□□□ 1.09
SNRPA1-210ENST00000560383 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
SNRPA1-210ENST00000560383 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
SNRPA1-210ENST00000560383 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
SNRPA1-210ENST00000560383 NBPF1Q3BBV0 1214 aa21.87■■□□□ 1.09
SNRPA1-210ENST00000560383 MINK1Q8N4C8 1332 aaPredicted RBP21.86■■□□□ 1.09
SNRPA1-210ENST00000560383 WASLO00401 505 aaPredicted RBP21.85■■□□□ 1.09
SNRPA1-210ENST00000560383 HIRIP3Q9BW71 556 aaPredicted RBP21.85■■□□□ 1.09
SNRPA1-210ENST00000560383 ATP7BP35670 1465 aa21.84■■□□□ 1.09
SNRPA1-210ENST00000560383 PRR36Q9H6K5 1346 aa21.84■■□□□ 1.09
SNRPA1-210ENST00000560383 GLI3P10071 1580 aa21.84■■□□□ 1.09
SNRPA1-210ENST00000560383 UNC5CLQ8IV45 518 aa21.83■■□□□ 1.09
SNRPA1-210ENST00000560383 PMFBP1Q8TBY8 1022 aa21.83■■□□□ 1.09
SNRPA1-210ENST00000560383 GJD4Q96KN9 370 aaPredicted RBP21.83■■□□□ 1.09
SNRPA1-210ENST00000560383 GPRASP1Q5JY77 1395 aa21.83■■□□□ 1.08
SNRPA1-210ENST00000560383 TOPAZ1Q8N9V7 1692 aa21.82■■□□□ 1.08
SNRPA1-210ENST00000560383 CRYBG1Q9Y4K1 1723 aa21.82■■□□□ 1.08
SNRPA1-210ENST00000560383 RALGAPBQ86X10 1494 aa21.82■■□□□ 1.08
SNRPA1-210ENST00000560383 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
SNRPA1-210ENST00000560383 NRAPQ86VF7 1730 aa21.78■■□□□ 1.08
SNRPA1-210ENST00000560383 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
SNRPA1-210ENST00000560383 COL14A1Q05707 1796 aaKnown RBP21.77■■□□□ 1.08
SNRPA1-210ENST00000560383 LMOD2Q6P5Q4 547 aa21.77■■□□□ 1.08
SNRPA1-210ENST00000560383 TRPM1Q7Z4N2 1603 aa21.76■■□□□ 1.07
SNRPA1-210ENST00000560383 VPS72Q15906 364 aa21.75■■□□□ 1.07
SNRPA1-210ENST00000560383 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms