RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 BCL9LQ86UU0 1499 aa25.33■■□□□ 1.65
HERC1-207ENST00000560316 ESCO1Q5FWF5 840 aa25.31■■□□□ 1.64
HERC1-207ENST00000560316 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
HERC1-207ENST00000560316 XPCQ01831 940 aaPredicted RBP25.3■■□□□ 1.64
HERC1-207ENST00000560316 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
HERC1-207ENST00000560316 CCDC125Q86Z20 511 aa25.29■■□□□ 1.64
HERC1-207ENST00000560316 NPHP3Q7Z494 1330 aa25.29■■□□□ 1.64
HERC1-207ENST00000560316 PRAG1Q86YV5 1406 aa25.29■■□□□ 1.64
HERC1-207ENST00000560316 GJD4Q96KN9 370 aaPredicted RBP25.28■■□□□ 1.64
HERC1-207ENST00000560316 PXDNQ92626 1479 aa25.28■■□□□ 1.64
HERC1-207ENST00000560316 FOXO3O43524 673 aa25.26■■□□□ 1.63
HERC1-207ENST00000560316 MARF1Q9Y4F3 1742 aaKnown RBP25.23■■□□□ 1.63
HERC1-207ENST00000560316 RPGRIP1LQ68CZ1 1315 aa25.23■■□□□ 1.63
HERC1-207ENST00000560316 CDC42BPGQ6DT37 1551 aa25.22■■□□□ 1.63
HERC1-207ENST00000560316 NUTM2FA1L443 756 aa25.22■■□□□ 1.63
HERC1-207ENST00000560316 RALGAPBQ86X10 1494 aa25.18■■□□□ 1.62
HERC1-207ENST00000560316 UNC5CLQ8IV45 518 aa25.18■■□□□ 1.62
HERC1-207ENST00000560316 NAIPQ13075 1403 aa25.18■■□□□ 1.62
HERC1-207ENST00000560316 PPLO60437 1756 aa25.18■■□□□ 1.62
HERC1-207ENST00000560316 WAPLQ7Z5K2 1190 aa25.17■■□□□ 1.62
HERC1-207ENST00000560316 BLMP54132 1417 aaPredicted RBP25.17■■□□□ 1.62
HERC1-207ENST00000560316 GLI3P10071 1580 aa25.17■■□□□ 1.62
HERC1-207ENST00000560316 LRPPRCP42704 1394 aaKnown RBP25.17■■□□□ 1.62
HERC1-207ENST00000560316 DEFB132Q7Z7B7 95 aa25.16■■□□□ 1.62
HERC1-207ENST00000560316 STK26Q9P289 416 aa25.16■■□□□ 1.62
HERC1-207ENST00000560316 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.15■■□□□ 1.62
HERC1-207ENST00000560316 SLIT2O94813 1529 aa25.15■■□□□ 1.62
HERC1-207ENST00000560316 ADGRF5Q8IZF2 1346 aa25.12■■□□□ 1.61
HERC1-207ENST00000560316 SPATA31A3Q5VYP0 1347 aa25.12■■□□□ 1.61
HERC1-207ENST00000560316 SLC4A1APQ9BWU0 796 aaKnown RBP25.11■■□□□ 1.61
HERC1-207ENST00000560316 BRWD3Q6RI45 1802 aa25.1■■□□□ 1.61
HERC1-207ENST00000560316 PLEKHH1Q9ULM0 1364 aa25.1■■□□□ 1.61
HERC1-207ENST00000560316 SEPT12Q8IYM1 358 aa25.09■■□□□ 1.61
HERC1-207ENST00000560316 SF3B2Q13435 895 aaKnown RBP25.08■■□□□ 1.61
HERC1-207ENST00000560316 KRT28Q7Z3Y7 464 aa25.08■■□□□ 1.61
HERC1-207ENST00000560316 TECPR2O15040 1411 aa25.08■■□□□ 1.61
HERC1-207ENST00000560316 RRBP1Q9P2E9 1410 aaKnown RBP25.07■■□□□ 1.6
HERC1-207ENST00000560316 PLEKHG5O94827 1062 aa25.07■■□□□ 1.6
HERC1-207ENST00000560316 TMEM132EQ6IEE7 984 aa25.07■■□□□ 1.6
HERC1-207ENST00000560316 USP32Q8NFA0 1604 aa25.07■■□□□ 1.6
HERC1-207ENST00000560316 CCDC144AA2RUR9 1427 aa25.05■■□□□ 1.6
HERC1-207ENST00000560316 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
HERC1-207ENST00000560316 RGL3Q3MIN7 710 aa25.05■■□□□ 1.6
HERC1-207ENST00000560316 CABLES1Q8TDN4 633 aa25.05■■□□□ 1.6
HERC1-207ENST00000560316 ABCC11Q96J66 1382 aa25.04■■□□□ 1.6
HERC1-207ENST00000560316 FMN2Q9NZ56 1722 aa25.03■■□□□ 1.6
HERC1-207ENST00000560316 VPS72Q15906 364 aa25.03■■□□□ 1.6
HERC1-207ENST00000560316 CCDC9Q9Y3X0 531 aaKnown RBP25.03■■□□□ 1.6
HERC1-207ENST00000560316 KIF1AQ12756 1690 aa25.02■■□□□ 1.6
HERC1-207ENST00000560316 KRT27Q7Z3Y8 459 aa25■■□□□ 1.59
HERC1-207ENST00000560316 TNS3Q68CZ2 1445 aa25■■□□□ 1.59
HERC1-207ENST00000560316 ONECUT3O60422 494 aaPredicted RBP24.99■■□□□ 1.59
HERC1-207ENST00000560316 KNDC1Q76NI1 1749 aa24.99■■□□□ 1.59
HERC1-207ENST00000560316 LRP5O75197 1615 aa24.98■■□□□ 1.59
HERC1-207ENST00000560316 PSDA5PKW4 1024 aaPredicted RBP24.98■■□□□ 1.59
HERC1-207ENST00000560316 PHF8Q9UPP1 1060 aa24.98■■□□□ 1.59
HERC1-207ENST00000560316 PLCH1Q4KWH8 1693 aa24.97■■□□□ 1.59
HERC1-207ENST00000560316 SPATA31E1Q6ZUB1 1445 aa24.97■■□□□ 1.59
HERC1-207ENST00000560316 ANKRD30BQ9BXX2 1392 aa24.97■■□□□ 1.59
HERC1-207ENST00000560316 PSME1Q06323 249 aa24.97■■□□□ 1.59
HERC1-207ENST00000560316 LMOD2Q6P5Q4 547 aa24.97■■□□□ 1.59
HERC1-207ENST00000560316 YTHDC2Q9H6S0 1430 aaKnown RBP24.96■■□□□ 1.59
HERC1-207ENST00000560316 RGPD8O14715 1765 aaPredicted RBP24.95■■□□□ 1.58
HERC1-207ENST00000560316 PIK3C2GO75747 1445 aa24.95■■□□□ 1.58
HERC1-207ENST00000560316 A0A0G2JS52 829 aa24.94■■□□□ 1.58
HERC1-207ENST00000560316 MYT1Q01538 1121 aa24.94■■□□□ 1.58
HERC1-207ENST00000560316 IFT172Q9UG01 1749 aa24.94■■□□□ 1.58
HERC1-207ENST00000560316 NWD2Q9ULI1 1742 aa24.94■■□□□ 1.58
HERC1-207ENST00000560316 FAM83GA6ND36 823 aa24.93■■□□□ 1.58
HERC1-207ENST00000560316 HRCP23327 699 aa24.92■■□□□ 1.58
HERC1-207ENST00000560316 BAG6P46379 1132 aa24.92■■□□□ 1.58
HERC1-207ENST00000560316 SBNO1A3KN83 1393 aa24.92■■□□□ 1.58
HERC1-207ENST00000560316 ABCA3Q99758 1704 aa24.91■■□□□ 1.58
HERC1-207ENST00000560316 FAM98CQ17RN3 349 aaKnown RBP24.9■■□□□ 1.58
HERC1-207ENST00000560316 SIRT1Q96EB6 747 aa24.9■■□□□ 1.58
HERC1-207ENST00000560316 ARHGEF10O15013 1369 aa24.9■■□□□ 1.58
HERC1-207ENST00000560316 NRXN1Q9ULB1 1477 aa24.89■■□□□ 1.58
HERC1-207ENST00000560316 SAFB2Q14151 953 aaKnown RBP eCLIP24.89■■□□□ 1.58
HERC1-207ENST00000560316 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
HERC1-207ENST00000560316 EN1Q05925 392 aaPredicted RBP24.86■■□□□ 1.57
HERC1-207ENST00000560316 BTG4Q9NY30 223 aa24.86■■□□□ 1.57
HERC1-207ENST00000560316 FAM182BQ5T319 152 aa24.85■■□□□ 1.57
HERC1-207ENST00000560316 PRAM1Q96QH2 718 aa24.85■■□□□ 1.57
HERC1-207ENST00000560316 C14orf93Q9H972 538 aaKnown RBP24.85■■□□□ 1.57
HERC1-207ENST00000560316 CFAP70Q5T0N1 1121 aa24.84■■□□□ 1.57
HERC1-207ENST00000560316 NRAPQ86VF7 1730 aa24.83■■□□□ 1.57
HERC1-207ENST00000560316 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
HERC1-207ENST00000560316 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
HERC1-207ENST00000560316 R3HDM1Q15032 1099 aaKnown RBP24.81■■□□□ 1.56
HERC1-207ENST00000560316 POGKQ9P215 609 aa24.77■■□□□ 1.56
HERC1-207ENST00000560316 RGPD1P0DJD0 1748 aa24.77■■□□□ 1.56
HERC1-207ENST00000560316 ANKARQ7Z5J8 1434 aa24.77■■□□□ 1.56
HERC1-207ENST00000560316 TRPM3Q9HCF6 1732 aaPredicted RBP24.76■■□□□ 1.55
HERC1-207ENST00000560316 COL14A1Q05707 1796 aaKnown RBP24.76■■□□□ 1.55
HERC1-207ENST00000560316 SPATA31A5Q5VU36 1347 aa24.76■■□□□ 1.55
HERC1-207ENST00000560316 SPATA31A7Q8IWB4 1347 aa24.76■■□□□ 1.55
HERC1-207ENST00000560316 HIRIP3Q9BW71 556 aaPredicted RBP24.75■■□□□ 1.55
HERC1-207ENST00000560316 EZH2Q15910 746 aaKnown RBP24.74■■□□□ 1.55
HERC1-207ENST00000560316 ALS2Q96Q42 1657 aa24.73■■□□□ 1.55
HERC1-207ENST00000560316 GPRASP1Q5JY77 1395 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms