RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 NUTM2AQ8IVF1 878 aaPredicted RBP30.37■■■□□ 2.45
ETFA-213ENST00000560309 ORAI2Q96SN7 254 aa30.37■■■□□ 2.45
ETFA-213ENST00000560309 SOS2Q07890 1332 aaPredicted RBP30.37■■■□□ 2.45
ETFA-213ENST00000560309 TMEM132EQ6IEE7 984 aa30.36■■■□□ 2.45
ETFA-213ENST00000560309 STAC3Q96MF2 364 aa30.35■■■□□ 2.45
ETFA-213ENST00000560309 MYOM2P54296 1465 aa30.35■■■□□ 2.45
ETFA-213ENST00000560309 CDC42BPGQ6DT37 1551 aa30.35■■■□□ 2.45
ETFA-213ENST00000560309 NRXN1Q9ULB1 1477 aa30.34■■■□□ 2.45
ETFA-213ENST00000560309 DDX17Q92841 729 aaKnown RBP30.34■■■□□ 2.45
ETFA-213ENST00000560309 YTHDC2Q9H6S0 1430 aaKnown RBP30.33■■■□□ 2.45
ETFA-213ENST00000560309 DHX57Q6P158 1386 aaKnown RBP30.33■■■□□ 2.45
ETFA-213ENST00000560309 PNPLA6Q8IY17 1366 aa30.33■■■□□ 2.45
ETFA-213ENST00000560309 WAPLQ7Z5K2 1190 aa30.33■■■□□ 2.45
ETFA-213ENST00000560309 KNDC1Q76NI1 1749 aa30.33■■■□□ 2.45
ETFA-213ENST00000560309 ESCO1Q5FWF5 840 aa30.32■■■□□ 2.44
ETFA-213ENST00000560309 NPHP3Q7Z494 1330 aa30.31■■■□□ 2.44
ETFA-213ENST00000560309 CFAP70Q5T0N1 1121 aa30.27■■■□□ 2.44
ETFA-213ENST00000560309 RXRBP28702 533 aa30.26■■■□□ 2.43
ETFA-213ENST00000560309 AFF2P51816 1311 aa30.23■■■□□ 2.43
ETFA-213ENST00000560309 PLEKHH1Q9ULM0 1364 aa30.22■■■□□ 2.43
ETFA-213ENST00000560309 C8orf37Q96NL8 207 aa30.21■■■□□ 2.43
ETFA-213ENST00000560309 FOXO3O43524 673 aa30.2■■■□□ 2.43
ETFA-213ENST00000560309 NGLY1Q96IV0 654 aa30.19■■■□□ 2.42
ETFA-213ENST00000560309 DCAF11Q8TEB1 546 aa30.18■■■□□ 2.42
ETFA-213ENST00000560309 CDK12Q9NYV4 1490 aaPredicted RBP30.18■■■□□ 2.42
ETFA-213ENST00000560309 POGKQ9P215 609 aa30.16■■■□□ 2.42
ETFA-213ENST00000560309 DLC1Q96QB1 1528 aa30.16■■■□□ 2.42
ETFA-213ENST00000560309 NUTM2FA1L443 756 aa30.15■■■□□ 2.42
ETFA-213ENST00000560309 ADAMTS2O95450 1211 aa30.15■■■□□ 2.42
ETFA-213ENST00000560309 QTRT2Q9H974 415 aaKnown RBP30.15■■■□□ 2.42
ETFA-213ENST00000560309 FMN2Q9NZ56 1722 aa30.15■■■□□ 2.42
ETFA-213ENST00000560309 PXDNQ92626 1479 aa30.14■■■□□ 2.42
ETFA-213ENST00000560309 RBM6P78332 1123 aaKnown RBP30.14■■■□□ 2.42
ETFA-213ENST00000560309 PRAM1Q96QH2 718 aa30.14■■■□□ 2.42
ETFA-213ENST00000560309 COL22A1Q8NFW1 1626 aaPredicted RBP30.14■■■□□ 2.41
ETFA-213ENST00000560309 KDM2AQ9Y2K7 1162 aa30.13■■■□□ 2.41
ETFA-213ENST00000560309 KIF1AQ12756 1690 aa30.11■■■□□ 2.41
ETFA-213ENST00000560309 PSME1Q06323 249 aa30.1■■■□□ 2.41
ETFA-213ENST00000560309 FNBP4Q8N3X1 1017 aaPredicted RBP30.1■■■□□ 2.41
ETFA-213ENST00000560309 PHF8Q9UPP1 1060 aa30.08■■■□□ 2.41
ETFA-213ENST00000560309 ADGRB1O14514 1584 aa30.07■■■□□ 2.4
ETFA-213ENST00000560309 USP21Q9UK80 565 aa30.07■■■□□ 2.4
ETFA-213ENST00000560309 XPCQ01831 940 aaPredicted RBP30.06■■■□□ 2.4
ETFA-213ENST00000560309 KRT28Q7Z3Y7 464 aa30.06■■■□□ 2.4
ETFA-213ENST00000560309 TRPC5Q9UL62 973 aaPredicted RBP30.06■■■□□ 2.4
ETFA-213ENST00000560309 SPATA31A3Q5VYP0 1347 aa30.05■■■□□ 2.4
ETFA-213ENST00000560309 SAFB2Q14151 953 aaKnown RBP eCLIP30.05■■■□□ 2.4
ETFA-213ENST00000560309 TRAK1Q9UPV9 953 aa30.05■■■□□ 2.4
ETFA-213ENST00000560309 EIF3AQ14152 1382 aaKnown RBP30.04■■■□□ 2.4
ETFA-213ENST00000560309 ANKARQ7Z5J8 1434 aa30.04■■■□□ 2.4
ETFA-213ENST00000560309 UPF1Q92900 1129 aaKnown RBP eCLIP30■■■□□ 2.39
ETFA-213ENST00000560309 ADGRB2O60241 1585 aa29.99■■■□□ 2.39
ETFA-213ENST00000560309 RGPD8O14715 1765 aaPredicted RBP29.98■■■□□ 2.39
ETFA-213ENST00000560309 SBNO1A3KN83 1393 aa29.98■■■□□ 2.39
ETFA-213ENST00000560309 WASLO00401 505 aaPredicted RBP29.95■■■□□ 2.39
ETFA-213ENST00000560309 MARF1Q9Y4F3 1742 aaKnown RBP29.95■■■□□ 2.38
ETFA-213ENST00000560309 TNS3Q68CZ2 1445 aa29.94■■■□□ 2.38
ETFA-213ENST00000560309 ARHGEF10O15013 1369 aa29.93■■■□□ 2.38
ETFA-213ENST00000560309 MINK1Q8N4C8 1332 aaPredicted RBP29.93■■■□□ 2.38
ETFA-213ENST00000560309 ATRNO75882 1429 aa29.92■■■□□ 2.38
ETFA-213ENST00000560309 RGS12O14924 1447 aa29.91■■■□□ 2.38
ETFA-213ENST00000560309 HIRIP3Q9BW71 556 aaPredicted RBP29.91■■■□□ 2.38
ETFA-213ENST00000560309 HAP1P54257 671 aaPredicted RBP29.9■■■□□ 2.38
ETFA-213ENST00000560309 PMFBP1Q8TBY8 1022 aa29.9■■■□□ 2.38
ETFA-213ENST00000560309 BCL9LQ86UU0 1499 aa29.89■■■□□ 2.38
ETFA-213ENST00000560309 GPRASP1Q5JY77 1395 aa29.89■■■□□ 2.37
ETFA-213ENST00000560309 KIAA1210Q9ULL0 1709 aa29.88■■■□□ 2.37
ETFA-213ENST00000560309 TULP4Q9NRJ4 1543 aa29.87■■■□□ 2.37
ETFA-213ENST00000560309 USP32Q8NFA0 1604 aa29.87■■■□□ 2.37
ETFA-213ENST00000560309 UNC5CLQ8IV45 518 aa29.87■■■□□ 2.37
ETFA-213ENST00000560309 GJD4Q96KN9 370 aaPredicted RBP29.86■■■□□ 2.37
ETFA-213ENST00000560309 LMOD2Q6P5Q4 547 aa29.85■■■□□ 2.37
ETFA-213ENST00000560309 SLIT2O94813 1529 aa29.83■■■□□ 2.37
ETFA-213ENST00000560309 ATAD2Q6PL18 1390 aa29.82■■■□□ 2.36
ETFA-213ENST00000560309 PRR36Q9H6K5 1346 aa29.82■■■□□ 2.36
ETFA-213ENST00000560309 NGDNQ8NEJ9 315 aaKnown RBP29.82■■■□□ 2.36
ETFA-213ENST00000560309 ARHGEF28Q8N1W1 1705 aaKnown RBP29.82■■■□□ 2.36
ETFA-213ENST00000560309 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.82■■■□□ 2.36
ETFA-213ENST00000560309 NUDT16Q96DE0 195 aaKnown RBP29.79■■■□□ 2.36
ETFA-213ENST00000560309 CABLES1Q8TDN4 633 aa29.78■■■□□ 2.36
ETFA-213ENST00000560309 CDK19Q9BWU1 502 aa29.77■■■□□ 2.36
ETFA-213ENST00000560309 ITSN1Q15811 1721 aa29.75■■■□□ 2.35
ETFA-213ENST00000560309 VPS72Q15906 364 aa29.74■■■□□ 2.35
ETFA-213ENST00000560309 NBPF1Q3BBV0 1214 aa29.74■■■□□ 2.35
ETFA-213ENST00000560309 CCDC61Q9Y6R9 512 aa29.74■■■□□ 2.35
ETFA-213ENST00000560309 TRPM3Q9HCF6 1732 aaPredicted RBP29.74■■■□□ 2.35
ETFA-213ENST00000560309 CCDC125Q86Z20 511 aa29.73■■■□□ 2.35
ETFA-213ENST00000560309 NWD2Q9ULI1 1742 aa29.71■■■□□ 2.35
ETFA-213ENST00000560309 L3MBTL2Q969R5 705 aa29.71■■■□□ 2.35
ETFA-213ENST00000560309 ATP7BP35670 1465 aa29.71■■■□□ 2.35
ETFA-213ENST00000560309 RALGAPBQ86X10 1494 aa29.7■■■□□ 2.35
ETFA-213ENST00000560309 FAM83GA6ND36 823 aa29.7■■■□□ 2.35
ETFA-213ENST00000560309 PAK3O75914 559 aaPredicted RBP29.7■■■□□ 2.35
ETFA-213ENST00000560309 ALS2Q96Q42 1657 aa29.69■■■□□ 2.34
ETFA-213ENST00000560309 PLEKHG3A1L390 1219 aa29.69■■■□□ 2.34
ETFA-213ENST00000560309 PLEKHG5O94827 1062 aa29.68■■■□□ 2.34
ETFA-213ENST00000560309 CENPJQ9HC77 1338 aaPredicted RBP29.68■■■□□ 2.34
ETFA-213ENST00000560309 ABCA3Q99758 1704 aa29.68■■■□□ 2.34
ETFA-213ENST00000560309 POLR3AO14802 1390 aaPredicted RBP29.66■■■□□ 2.34
ETFA-213ENST00000560309 ONECUT3O60422 494 aaPredicted RBP29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms