RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MYOM2P54296 1465 aa30.8■■■□□ 2.52
PSEN1-225ENST00000560005 PRAG1Q86YV5 1406 aa30.8■■■□□ 2.52
PSEN1-225ENST00000560005 HFM1A2PYH4 1435 aa30.78■■■□□ 2.52
PSEN1-225ENST00000560005 BCL9LQ86UU0 1499 aa30.77■■■□□ 2.52
PSEN1-225ENST00000560005 NPHP3Q7Z494 1330 aa30.75■■■□□ 2.51
PSEN1-225ENST00000560005 ESCO1Q5FWF5 840 aa30.75■■■□□ 2.51
PSEN1-225ENST00000560005 CCDC125Q86Z20 511 aa30.74■■■□□ 2.51
PSEN1-225ENST00000560005 PPARGC1BQ86YN6 1023 aaKnown RBP30.73■■■□□ 2.51
PSEN1-225ENST00000560005 PXDNQ92626 1479 aa30.73■■■□□ 2.51
PSEN1-225ENST00000560005 MARF1Q9Y4F3 1742 aaKnown RBP30.71■■■□□ 2.51
PSEN1-225ENST00000560005 XPCQ01831 940 aaPredicted RBP30.71■■■□□ 2.51
PSEN1-225ENST00000560005 CDC42BPGQ6DT37 1551 aa30.71■■■□□ 2.51
PSEN1-225ENST00000560005 GJD4Q96KN9 370 aaPredicted RBP30.7■■■□□ 2.51
PSEN1-225ENST00000560005 FOXO3O43524 673 aa30.69■■■□□ 2.5
PSEN1-225ENST00000560005 RPGRIP1LQ68CZ1 1315 aa30.69■■■□□ 2.5
PSEN1-225ENST00000560005 PPLO60437 1756 aa30.66■■■□□ 2.5
PSEN1-225ENST00000560005 NAIPQ13075 1403 aa30.65■■■□□ 2.5
PSEN1-225ENST00000560005 PCGF6Q9BYE7 350 aa30.64■■■□□ 2.5
PSEN1-225ENST00000560005 NUTM2FA1L443 756 aa30.62■■■□□ 2.49
PSEN1-225ENST00000560005 LRPPRCP42704 1394 aaKnown RBP30.62■■■□□ 2.49
PSEN1-225ENST00000560005 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.61■■■□□ 2.49
PSEN1-225ENST00000560005 RALGAPBQ86X10 1494 aa30.6■■■□□ 2.49
PSEN1-225ENST00000560005 UNC5CLQ8IV45 518 aa30.6■■■□□ 2.49
PSEN1-225ENST00000560005 GLI3P10071 1580 aa30.59■■■□□ 2.49
PSEN1-225ENST00000560005 BLMP54132 1417 aaPredicted RBP30.59■■■□□ 2.49
PSEN1-225ENST00000560005 SLIT2O94813 1529 aa30.57■■■□□ 2.49
PSEN1-225ENST00000560005 WAPLQ7Z5K2 1190 aa30.57■■■□□ 2.48
PSEN1-225ENST00000560005 STK26Q9P289 416 aa30.57■■■□□ 2.48
PSEN1-225ENST00000560005 SLC4A1APQ9BWU0 796 aaKnown RBP30.55■■■□□ 2.48
PSEN1-225ENST00000560005 DEFB132Q7Z7B7 95 aa30.54■■■□□ 2.48
PSEN1-225ENST00000560005 SPATA31A3Q5VYP0 1347 aa30.53■■■□□ 2.48
PSEN1-225ENST00000560005 ADGRF5Q8IZF2 1346 aa30.53■■■□□ 2.48
PSEN1-225ENST00000560005 TECPR2O15040 1411 aa30.53■■■□□ 2.48
PSEN1-225ENST00000560005 BRWD3Q6RI45 1802 aa30.51■■■□□ 2.47
PSEN1-225ENST00000560005 PLEKHH1Q9ULM0 1364 aa30.51■■■□□ 2.47
PSEN1-225ENST00000560005 USP32Q8NFA0 1604 aa30.51■■■□□ 2.47
PSEN1-225ENST00000560005 RRBP1Q9P2E9 1410 aaKnown RBP30.5■■■□□ 2.47
PSEN1-225ENST00000560005 CCDC144AA2RUR9 1427 aa30.49■■■□□ 2.47
PSEN1-225ENST00000560005 FMN2Q9NZ56 1722 aa30.47■■■□□ 2.47
PSEN1-225ENST00000560005 KIF1AQ12756 1690 aa30.47■■■□□ 2.47
PSEN1-225ENST00000560005 SF3B2Q13435 895 aaKnown RBP30.47■■■□□ 2.47
PSEN1-225ENST00000560005 SEPT12Q8IYM1 358 aa30.47■■■□□ 2.47
PSEN1-225ENST00000560005 TMEM132EQ6IEE7 984 aa30.46■■■□□ 2.47
PSEN1-225ENST00000560005 KRT28Q7Z3Y7 464 aa30.46■■■□□ 2.47
PSEN1-225ENST00000560005 ABCC11Q96J66 1382 aa30.45■■■□□ 2.47
PSEN1-225ENST00000560005 KNDC1Q76NI1 1749 aa30.44■■■□□ 2.46
PSEN1-225ENST00000560005 HAP1P54257 671 aaPredicted RBP30.44■■■□□ 2.46
PSEN1-225ENST00000560005 RGL3Q3MIN7 710 aa30.44■■■□□ 2.46
PSEN1-225ENST00000560005 VPS72Q15906 364 aa30.42■■■□□ 2.46
PSEN1-225ENST00000560005 PLEKHG5O94827 1062 aa30.41■■■□□ 2.46
PSEN1-225ENST00000560005 CABLES1Q8TDN4 633 aa30.41■■■□□ 2.46
PSEN1-225ENST00000560005 TNS3Q68CZ2 1445 aa30.4■■■□□ 2.46
PSEN1-225ENST00000560005 CCDC9Q9Y3X0 531 aaKnown RBP30.4■■■□□ 2.46
PSEN1-225ENST00000560005 PLCH1Q4KWH8 1693 aa30.39■■■□□ 2.45
PSEN1-225ENST00000560005 ANKRD30BQ9BXX2 1392 aa30.39■■■□□ 2.45
PSEN1-225ENST00000560005 IFT172Q9UG01 1749 aa30.39■■■□□ 2.45
PSEN1-225ENST00000560005 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.45
PSEN1-225ENST00000560005 LRP5O75197 1615 aa30.38■■■□□ 2.45
PSEN1-225ENST00000560005 YTHDC2Q9H6S0 1430 aaKnown RBP30.38■■■□□ 2.45
PSEN1-225ENST00000560005 KRT27Q7Z3Y8 459 aa30.37■■■□□ 2.45
PSEN1-225ENST00000560005 PHF8Q9UPP1 1060 aa30.37■■■□□ 2.45
PSEN1-225ENST00000560005 NWD2Q9ULI1 1742 aa30.36■■■□□ 2.45
PSEN1-225ENST00000560005 ONECUT3O60422 494 aaPredicted RBP30.36■■■□□ 2.45
PSEN1-225ENST00000560005 PIK3C2GO75747 1445 aa30.36■■■□□ 2.45
PSEN1-225ENST00000560005 PSME1Q06323 249 aa30.35■■■□□ 2.45
PSEN1-225ENST00000560005 RGPD8O14715 1765 aaPredicted RBP30.35■■■□□ 2.45
PSEN1-225ENST00000560005 LMOD2Q6P5Q4 547 aa30.33■■■□□ 2.45
PSEN1-225ENST00000560005 ABCA3Q99758 1704 aa30.32■■■□□ 2.44
PSEN1-225ENST00000560005 PSDA5PKW4 1024 aaPredicted RBP30.31■■■□□ 2.44
PSEN1-225ENST00000560005 SBNO1A3KN83 1393 aa30.3■■■□□ 2.44
PSEN1-225ENST00000560005 A0A0G2JS52 829 aa30.3■■■□□ 2.44
PSEN1-225ENST00000560005 MYT1Q01538 1121 aa30.3■■■□□ 2.44
PSEN1-225ENST00000560005 NRXN1Q9ULB1 1477 aa30.3■■■□□ 2.44
PSEN1-225ENST00000560005 SIRT1Q96EB6 747 aa30.29■■■□□ 2.44
PSEN1-225ENST00000560005 ARHGEF10O15013 1369 aa30.28■■■□□ 2.44
PSEN1-225ENST00000560005 BAG6P46379 1132 aa30.28■■■□□ 2.44
PSEN1-225ENST00000560005 FAM83GA6ND36 823 aa30.27■■■□□ 2.44
PSEN1-225ENST00000560005 HRCP23327 699 aa30.24■■■□□ 2.43
PSEN1-225ENST00000560005 FAM98CQ17RN3 349 aaKnown RBP30.24■■■□□ 2.43
PSEN1-225ENST00000560005 SAFB2Q14151 953 aaKnown RBP eCLIP30.23■■■□□ 2.43
PSEN1-225ENST00000560005 NRAPQ86VF7 1730 aa30.22■■■□□ 2.43
PSEN1-225ENST00000560005 C14orf93Q9H972 538 aaKnown RBP30.22■■■□□ 2.43
PSEN1-225ENST00000560005 PMFBP1Q8TBY8 1022 aa30.21■■■□□ 2.43
PSEN1-225ENST00000560005 MPHOSPH9Q99550 1183 aa30.21■■■□□ 2.43
PSEN1-225ENST00000560005 PRAM1Q96QH2 718 aa30.2■■■□□ 2.43
PSEN1-225ENST00000560005 DHX57Q6P158 1386 aaKnown RBP30.19■■■□□ 2.42
PSEN1-225ENST00000560005 BTG4Q9NY30 223 aa30.19■■■□□ 2.42
PSEN1-225ENST00000560005 EN1Q05925 392 aaPredicted RBP30.18■■■□□ 2.42
PSEN1-225ENST00000560005 CFAP70Q5T0N1 1121 aa30.18■■■□□ 2.42
PSEN1-225ENST00000560005 ANKARQ7Z5J8 1434 aa30.15■■■□□ 2.42
PSEN1-225ENST00000560005 FAM182BQ5T319 152 aa30.15■■■□□ 2.42
PSEN1-225ENST00000560005 RGPD1P0DJD0 1748 aa30.14■■■□□ 2.42
PSEN1-225ENST00000560005 TRPM3Q9HCF6 1732 aaPredicted RBP30.13■■■□□ 2.41
PSEN1-225ENST00000560005 COL14A1Q05707 1796 aaKnown RBP30.13■■■□□ 2.41
PSEN1-225ENST00000560005 POGKQ9P215 609 aa30.12■■■□□ 2.41
PSEN1-225ENST00000560005 R3HDM1Q15032 1099 aaKnown RBP30.11■■■□□ 2.41
PSEN1-225ENST00000560005 SPATA31A5Q5VU36 1347 aa30.09■■■□□ 2.41
PSEN1-225ENST00000560005 SPATA31A7Q8IWB4 1347 aa30.09■■■□□ 2.41
PSEN1-225ENST00000560005 ALS2Q96Q42 1657 aa30.09■■■□□ 2.41
PSEN1-225ENST00000560005 ADGRB2O60241 1585 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms