RNA–Protein interactions for RNA: ENST00000559888.1

AP3B2-212, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-212ENST00000559888 CCDC144AA2RUR9 1427 aa22.7■■□□□ 1.22
AP3B2-212ENST00000559888 ESCO1Q5FWF5 840 aa22.69■■□□□ 1.22
AP3B2-212ENST00000559888 STK26Q9P289 416 aa22.68■■□□□ 1.22
AP3B2-212ENST00000559888 WAPLQ7Z5K2 1190 aa22.67■■□□□ 1.22
AP3B2-212ENST00000559888 SPATA31E1Q6ZUB1 1445 aa22.66■■□□□ 1.22
AP3B2-212ENST00000559888 ANKRD30BQ9BXX2 1392 aa22.66■■□□□ 1.22
AP3B2-212ENST00000559888 USP21Q9UK80 565 aa22.66■■□□□ 1.22
AP3B2-212ENST00000559888 RGS12O14924 1447 aa22.65■■□□□ 1.22
AP3B2-212ENST00000559888 NPHP3Q7Z494 1330 aa22.65■■□□□ 1.22
AP3B2-212ENST00000559888 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
AP3B2-212ENST00000559888 FOXO3O43524 673 aa22.64■■□□□ 1.21
AP3B2-212ENST00000559888 LRPPRCP42704 1394 aaKnown RBP22.63■■□□□ 1.21
AP3B2-212ENST00000559888 FNBP4Q8N3X1 1017 aaPredicted RBP22.63■■□□□ 1.21
AP3B2-212ENST00000559888 CDC42BPGQ6DT37 1551 aa22.63■■□□□ 1.21
AP3B2-212ENST00000559888 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
AP3B2-212ENST00000559888 NUTM2FA1L443 756 aa22.62■■□□□ 1.21
AP3B2-212ENST00000559888 TRPC5Q9UL62 973 aaPredicted RBP22.62■■□□□ 1.21
AP3B2-212ENST00000559888 TECPR2O15040 1411 aa22.62■■□□□ 1.21
AP3B2-212ENST00000559888 XPCQ01831 940 aaPredicted RBP22.61■■□□□ 1.21
AP3B2-212ENST00000559888 COL22A1Q8NFW1 1626 aaPredicted RBP22.59■■□□□ 1.21
AP3B2-212ENST00000559888 PLEKHH1Q9ULM0 1364 aa22.59■■□□□ 1.21
AP3B2-212ENST00000559888 PXDNQ92626 1479 aa22.59■■□□□ 1.21
AP3B2-212ENST00000559888 PIK3C2GO75747 1445 aa22.57■■□□□ 1.2
AP3B2-212ENST00000559888 MYOM2P54296 1465 aa22.57■■□□□ 1.2
AP3B2-212ENST00000559888 IFT172Q9UG01 1749 aa22.57■■□□□ 1.2
AP3B2-212ENST00000559888 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
AP3B2-212ENST00000559888 SIRT1Q96EB6 747 aa22.55■■□□□ 1.2
AP3B2-212ENST00000559888 C14orf93Q9H972 538 aaKnown RBP22.55■■□□□ 1.2
AP3B2-212ENST00000559888 ATRNO75882 1429 aa22.55■■□□□ 1.2
AP3B2-212ENST00000559888 YTHDC2Q9H6S0 1430 aaKnown RBP22.55■■□□□ 1.2
AP3B2-212ENST00000559888 BCL9LQ86UU0 1499 aa22.52■■□□□ 1.2
AP3B2-212ENST00000559888 ATAD2Q6PL18 1390 aa22.51■■□□□ 1.19
AP3B2-212ENST00000559888 KNDC1Q76NI1 1749 aa22.51■■□□□ 1.19
AP3B2-212ENST00000559888 CFAP70Q5T0N1 1121 aa22.51■■□□□ 1.19
AP3B2-212ENST00000559888 KRT28Q7Z3Y7 464 aa22.5■■□□□ 1.19
AP3B2-212ENST00000559888 SPATA31A3Q5VYP0 1347 aa22.5■■□□□ 1.19
AP3B2-212ENST00000559888 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
AP3B2-212ENST00000559888 GJD4Q96KN9 370 aaPredicted RBP22.48■■□□□ 1.19
AP3B2-212ENST00000559888 FMN2Q9NZ56 1722 aa22.48■■□□□ 1.19
AP3B2-212ENST00000559888 MARF1Q9Y4F3 1742 aaKnown RBP22.47■■□□□ 1.19
AP3B2-212ENST00000559888 PHF8Q9UPP1 1060 aa22.46■■□□□ 1.19
AP3B2-212ENST00000559888 NRXN1Q9ULB1 1477 aa22.46■■□□□ 1.19
AP3B2-212ENST00000559888 PSME1Q06323 249 aa22.45■■□□□ 1.18
AP3B2-212ENST00000559888 KIF1AQ12756 1690 aa22.44■■□□□ 1.18
AP3B2-212ENST00000559888 SAFB2Q14151 953 aaKnown RBP eCLIP22.44■■□□□ 1.18
AP3B2-212ENST00000559888 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
AP3B2-212ENST00000559888 PRAM1Q96QH2 718 aa22.44■■□□□ 1.18
AP3B2-212ENST00000559888 POGKQ9P215 609 aa22.42■■□□□ 1.18
AP3B2-212ENST00000559888 RGPD8O14715 1765 aaPredicted RBP22.41■■□□□ 1.18
AP3B2-212ENST00000559888 CCDC125Q86Z20 511 aa22.41■■□□□ 1.18
AP3B2-212ENST00000559888 SLIT2O94813 1529 aa22.41■■□□□ 1.18
AP3B2-212ENST00000559888 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
AP3B2-212ENST00000559888 CABLES1Q8TDN4 633 aa22.4■■□□□ 1.18
AP3B2-212ENST00000559888 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
AP3B2-212ENST00000559888 PLEKHG5O94827 1062 aa22.38■■□□□ 1.17
AP3B2-212ENST00000559888 LMOD2Q6P5Q4 547 aa22.38■■□□□ 1.17
AP3B2-212ENST00000559888 TNS3Q68CZ2 1445 aa22.38■■□□□ 1.17
AP3B2-212ENST00000559888 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.37■■□□□ 1.17
AP3B2-212ENST00000559888 SBNO1A3KN83 1393 aa22.37■■□□□ 1.17
AP3B2-212ENST00000559888 RALGAPBQ86X10 1494 aa22.36■■□□□ 1.17
AP3B2-212ENST00000559888 PMFBP1Q8TBY8 1022 aa22.36■■□□□ 1.17
AP3B2-212ENST00000559888 TRAK1Q9UPV9 953 aa22.35■■□□□ 1.17
AP3B2-212ENST00000559888 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
AP3B2-212ENST00000559888 DLC1Q96QB1 1528 aa22.35■■□□□ 1.17
AP3B2-212ENST00000559888 USP32Q8NFA0 1604 aa22.35■■□□□ 1.17
AP3B2-212ENST00000559888 ZRANB1Q9UGI0 708 aa22.34■■□□□ 1.17
AP3B2-212ENST00000559888 GLI3P10071 1580 aa22.33■■□□□ 1.17
AP3B2-212ENST00000559888 VPS72Q15906 364 aa22.33■■□□□ 1.17
AP3B2-212ENST00000559888 DCAF11Q8TEB1 546 aa22.33■■□□□ 1.17
AP3B2-212ENST00000559888 ARHGEF10O15013 1369 aa22.33■■□□□ 1.17
AP3B2-212ENST00000559888 ANKARQ7Z5J8 1434 aa22.32■■□□□ 1.16
AP3B2-212ENST00000559888 HIRIP3Q9BW71 556 aaPredicted RBP22.32■■□□□ 1.16
AP3B2-212ENST00000559888 ADGRB1O14514 1584 aa22.31■■□□□ 1.16
AP3B2-212ENST00000559888 FAM83GA6ND36 823 aa22.31■■□□□ 1.16
AP3B2-212ENST00000559888 SEPT12Q8IYM1 358 aa22.31■■□□□ 1.16
AP3B2-212ENST00000559888 MINK1Q8N4C8 1332 aaPredicted RBP22.3■■□□□ 1.16
AP3B2-212ENST00000559888 ONECUT3O60422 494 aaPredicted RBP22.29■■□□□ 1.16
AP3B2-212ENST00000559888 STAC3Q96MF2 364 aa22.29■■□□□ 1.16
AP3B2-212ENST00000559888 CCDC9Q9Y3X0 531 aaKnown RBP22.29■■□□□ 1.16
AP3B2-212ENST00000559888 WASLO00401 505 aaPredicted RBP22.27■■□□□ 1.16
AP3B2-212ENST00000559888 ADGRB2O60241 1585 aa22.27■■□□□ 1.16
AP3B2-212ENST00000559888 GPRASP1Q5JY77 1395 aa22.26■■□□□ 1.15
AP3B2-212ENST00000559888 EP400Q96L91 3159 aa22.26■■□□□ 1.15
AP3B2-212ENST00000559888 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
AP3B2-212ENST00000559888 PRR36Q9H6K5 1346 aa22.26■■□□□ 1.15
AP3B2-212ENST00000559888 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
AP3B2-212ENST00000559888 BRWD3Q6RI45 1802 aa22.24■■□□□ 1.15
AP3B2-212ENST00000559888 NWD2Q9ULI1 1742 aa22.24■■□□□ 1.15
AP3B2-212ENST00000559888 HRCP23327 699 aa22.24■■□□□ 1.15
AP3B2-212ENST00000559888 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
AP3B2-212ENST00000559888 KRT27Q7Z3Y8 459 aa22.23■■□□□ 1.15
AP3B2-212ENST00000559888 ABCA3Q99758 1704 aa22.23■■□□□ 1.15
AP3B2-212ENST00000559888 SF3B2Q13435 895 aaKnown RBP22.22■■□□□ 1.15
AP3B2-212ENST00000559888 DEFB132Q7Z7B7 95 aa22.22■■□□□ 1.15
AP3B2-212ENST00000559888 NGDNQ8NEJ9 315 aaKnown RBP22.22■■□□□ 1.15
AP3B2-212ENST00000559888 BTG4Q9NY30 223 aa22.22■■□□□ 1.15
AP3B2-212ENST00000559888 TULP4Q9NRJ4 1543 aa22.21■■□□□ 1.15
AP3B2-212ENST00000559888 TRPM3Q9HCF6 1732 aaPredicted RBP22.2■■□□□ 1.14
AP3B2-212ENST00000559888 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
AP3B2-212ENST00000559888 A0A0G2JS52 829 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms