RNA–Protein interactions for RNA: ENST00000559872.1

PIF1-207, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 459 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-207ENST00000559872 NBPF1Q3BBV0 1214 aa23.04■■□□□ 1.28
PIF1-207ENST00000559872 PRAM1Q96QH2 718 aa23.04■■□□□ 1.28
PIF1-207ENST00000559872 POGKQ9P215 609 aa23.01■■□□□ 1.27
PIF1-207ENST00000559872 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
PIF1-207ENST00000559872 BRINP3Q76B58 766 aa23■■□□□ 1.27
PIF1-207ENST00000559872 CDC42BPGQ6DT37 1551 aa22.99■■□□□ 1.27
PIF1-207ENST00000559872 NBPF8Q3BBV2 869 aa22.98■■□□□ 1.27
PIF1-207ENST00000559872 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
PIF1-207ENST00000559872 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
PIF1-207ENST00000559872 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.26
PIF1-207ENST00000559872 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
PIF1-207ENST00000559872 TRPM1Q7Z4N2 1603 aa22.92■■□□□ 1.26
PIF1-207ENST00000559872 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
PIF1-207ENST00000559872 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
PIF1-207ENST00000559872 ORAI2Q96SN7 254 aa22.91■■□□□ 1.26
PIF1-207ENST00000559872 AHDC1Q5TGY3 1603 aaPredicted RBP22.9■■□□□ 1.26
PIF1-207ENST00000559872 ADGRB2O60241 1585 aa22.89■■□□□ 1.26
PIF1-207ENST00000559872 ARHGEF28Q8N1W1 1705 aaKnown RBP22.88■■□□□ 1.25
PIF1-207ENST00000559872 MINK1Q8N4C8 1332 aaPredicted RBP22.88■■□□□ 1.25
PIF1-207ENST00000559872 WASLO00401 505 aaPredicted RBP22.87■■□□□ 1.25
PIF1-207ENST00000559872 ESCO1Q5FWF5 840 aa22.87■■□□□ 1.25
PIF1-207ENST00000559872 HIRIP3Q9BW71 556 aaPredicted RBP22.87■■□□□ 1.25
PIF1-207ENST00000559872 NUTM2FA1L443 756 aa22.86■■□□□ 1.25
PIF1-207ENST00000559872 RALGAPBQ86X10 1494 aa22.85■■□□□ 1.25
PIF1-207ENST00000559872 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
PIF1-207ENST00000559872 CENPJQ9HC77 1338 aaPredicted RBP22.85■■□□□ 1.25
PIF1-207ENST00000559872 EIF3AQ14152 1382 aaKnown RBP22.85■■□□□ 1.25
PIF1-207ENST00000559872 ANKARQ7Z5J8 1434 aa22.84■■□□□ 1.25
PIF1-207ENST00000559872 COL16A1Q07092 1604 aaPredicted RBP22.83■■□□□ 1.25
PIF1-207ENST00000559872 PHLPP1O60346 1717 aa22.83■■□□□ 1.25
PIF1-207ENST00000559872 CARD11Q9BXL7 1154 aa22.83■■□□□ 1.25
PIF1-207ENST00000559872 JCADQ9P266 1359 aa22.82■■□□□ 1.24
PIF1-207ENST00000559872 DDX17Q92841 729 aaKnown RBP22.82■■□□□ 1.24
PIF1-207ENST00000559872 NHSL1Q5SYE7 1610 aa22.82■■□□□ 1.24
PIF1-207ENST00000559872 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
PIF1-207ENST00000559872 LRRC59Q96AG4 307 aaKnown RBP22.81■■□□□ 1.24
PIF1-207ENST00000559872 NPHP3Q7Z494 1330 aa22.81■■□□□ 1.24
PIF1-207ENST00000559872 CDK19Q9BWU1 502 aa22.79■■□□□ 1.24
PIF1-207ENST00000559872 PHF8Q9UPP1 1060 aa22.79■■□□□ 1.24
PIF1-207ENST00000559872 TULP4Q9NRJ4 1543 aa22.78■■□□□ 1.24
PIF1-207ENST00000559872 FOXO3O43524 673 aa22.78■■□□□ 1.24
PIF1-207ENST00000559872 PRR36Q9H6K5 1346 aa22.78■■□□□ 1.24
PIF1-207ENST00000559872 NUDT16Q96DE0 195 aaKnown RBP22.75■■□□□ 1.23
PIF1-207ENST00000559872 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
PIF1-207ENST00000559872 SPATA31A6Q5VVP1 1343 aa22.74■■□□□ 1.23
PIF1-207ENST00000559872 KIF1AQ12756 1690 aa22.74■■□□□ 1.23
PIF1-207ENST00000559872 SBNO2Q9Y2G9 1366 aa22.73■■□□□ 1.23
PIF1-207ENST00000559872 ATP7BP35670 1465 aa22.73■■□□□ 1.23
PIF1-207ENST00000559872 PXDNQ92626 1479 aa22.73■■□□□ 1.23
PIF1-207ENST00000559872 CCDC61Q9Y6R9 512 aa22.72■■□□□ 1.23
PIF1-207ENST00000559872 PMFBP1Q8TBY8 1022 aa22.71■■□□□ 1.23
PIF1-207ENST00000559872 EVC2Q86UK5 1308 aa22.71■■□□□ 1.23
PIF1-207ENST00000559872 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
PIF1-207ENST00000559872 KRT28Q7Z3Y7 464 aa22.7■■□□□ 1.22
PIF1-207ENST00000559872 PNPLA6Q8IY17 1366 aa22.7■■□□□ 1.22
PIF1-207ENST00000559872 QRICH2Q9H0J4 1663 aa22.7■■□□□ 1.22
PIF1-207ENST00000559872 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
PIF1-207ENST00000559872 PSME1Q06323 249 aa22.69■■□□□ 1.22
PIF1-207ENST00000559872 SHPRHQ149N8 1683 aa22.68■■□□□ 1.22
PIF1-207ENST00000559872 PLEKHG3A1L390 1219 aa22.68■■□□□ 1.22
PIF1-207ENST00000559872 XPCQ01831 940 aaPredicted RBP22.68■■□□□ 1.22
PIF1-207ENST00000559872 CABP2Q9NPB3 220 aa22.68■■□□□ 1.22
PIF1-207ENST00000559872 RGPD8O14715 1765 aaPredicted RBP22.68■■□□□ 1.22
PIF1-207ENST00000559872 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
PIF1-207ENST00000559872 SPATA31A3Q5VYP0 1347 aa22.66■■□□□ 1.22
PIF1-207ENST00000559872 SBNO1A3KN83 1393 aa22.65■■□□□ 1.22
PIF1-207ENST00000559872 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
PIF1-207ENST00000559872 NGDNQ8NEJ9 315 aaKnown RBP22.65■■□□□ 1.22
PIF1-207ENST00000559872 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
PIF1-207ENST00000559872 ST20-MTHFSA0A0A6YYL1 179 aa22.63■■□□□ 1.21
PIF1-207ENST00000559872 TESK2Q96S53 571 aa22.63■■□□□ 1.21
PIF1-207ENST00000559872 USP47Q96K76 1375 aa22.62■■□□□ 1.21
PIF1-207ENST00000559872 PUS7Q96PZ0 661 aaKnown RBP22.61■■□□□ 1.21
PIF1-207ENST00000559872 LRP6O75581 1613 aa22.6■■□□□ 1.21
PIF1-207ENST00000559872 ACEP12821 1306 aa22.6■■□□□ 1.21
PIF1-207ENST00000559872 ITSN1Q15811 1721 aa22.6■■□□□ 1.21
PIF1-207ENST00000559872 TNS3Q68CZ2 1445 aa22.6■■□□□ 1.21
PIF1-207ENST00000559872 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
PIF1-207ENST00000559872 TOPAZ1Q8N9V7 1692 aa22.6■■□□□ 1.21
PIF1-207ENST00000559872 NUTM2BA6NNL0 878 aaPredicted RBP22.59■■□□□ 1.21
PIF1-207ENST00000559872 NUTM2EB1AL46 878 aaPredicted RBP22.59■■□□□ 1.21
PIF1-207ENST00000559872 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
PIF1-207ENST00000559872 PHF23Q9BUL5 403 aaPredicted RBP22.59■■□□□ 1.21
PIF1-207ENST00000559872 CABP1Q9NZU7 370 aa22.59■■□□□ 1.21
PIF1-207ENST00000559872 ATAD2Q6PL18 1390 aa22.59■■□□□ 1.21
PIF1-207ENST00000559872 COL22A1Q8NFW1 1626 aaPredicted RBP22.57■■□□□ 1.2
PIF1-207ENST00000559872 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
PIF1-207ENST00000559872 MEX3CQ5U5Q3 659 aaKnown RBP22.55■■□□□ 1.2
PIF1-207ENST00000559872 RGS17Q9UGC6 210 aaPredicted RBP22.55■■□□□ 1.2
PIF1-207ENST00000559872 BRD4O60885 1362 aaPredicted RBP22.54■■□□□ 1.2
PIF1-207ENST00000559872 TRPM3Q9HCF6 1732 aaPredicted RBP22.53■■□□□ 1.2
PIF1-207ENST00000559872 ZNF692Q9BU19 519 aaPredicted RBP22.52■■□□□ 1.2
PIF1-207ENST00000559872 PAK3O75914 559 aaPredicted RBP22.51■■□□□ 1.19
PIF1-207ENST00000559872 TMF1P82094 1093 aa22.51■■□□□ 1.19
PIF1-207ENST00000559872 LMOD2Q6P5Q4 547 aa22.51■■□□□ 1.19
PIF1-207ENST00000559872 ADAMTS2O95450 1211 aa22.5■■□□□ 1.19
PIF1-207ENST00000559872 USP6P35125 1406 aa22.48■■□□□ 1.19
PIF1-207ENST00000559872 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
PIF1-207ENST00000559872 EIF4G2P78344 907 aaKnown RBP eCLIP22.48■■□□□ 1.19
PIF1-207ENST00000559872 ALS2Q96Q42 1657 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms