RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 DLC1Q96QB1 1528 aa19.62■□□□□ 0.73
CHRNB4-204ENST00000559849 MST1RQ04912 1400 aa19.62■□□□□ 0.73
CHRNB4-204ENST00000559849 NBPF1Q3BBV0 1214 aa19.61■□□□□ 0.73
CHRNB4-204ENST00000559849 CLSPNQ9HAW4 1339 aa19.61■□□□□ 0.73
CHRNB4-204ENST00000559849 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
CHRNB4-204ENST00000559849 BRINP3Q76B58 766 aa19.59■□□□□ 0.73
CHRNB4-204ENST00000559849 CDC42BPGQ6DT37 1551 aa19.57■□□□□ 0.72
CHRNB4-204ENST00000559849 C1orf167Q5SNV9 1468 aa19.56■□□□□ 0.72
CHRNB4-204ENST00000559849 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
CHRNB4-204ENST00000559849 NBPF8Q3BBV2 869 aa19.55■□□□□ 0.72
CHRNB4-204ENST00000559849 TRPM1Q7Z4N2 1603 aa19.54■□□□□ 0.72
CHRNB4-204ENST00000559849 ORAI2Q96SN7 254 aa19.53■□□□□ 0.72
CHRNB4-204ENST00000559849 ARHGEF28Q8N1W1 1705 aaKnown RBP19.52■□□□□ 0.72
CHRNB4-204ENST00000559849 TIMELESSQ9UNS1 1208 aa19.52■□□□□ 0.72
CHRNB4-204ENST00000559849 ROCK2O75116 1388 aaKnown RBP19.52■□□□□ 0.72
CHRNB4-204ENST00000559849 PHLPP1O60346 1717 aa19.52■□□□□ 0.72
CHRNB4-204ENST00000559849 NUTM2FA1L443 756 aa19.52■□□□□ 0.71
CHRNB4-204ENST00000559849 ESCO1Q5FWF5 840 aa19.52■□□□□ 0.71
CHRNB4-204ENST00000559849 MINK1Q8N4C8 1332 aaPredicted RBP19.51■□□□□ 0.71
CHRNB4-204ENST00000559849 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
CHRNB4-204ENST00000559849 AHDC1Q5TGY3 1603 aaPredicted RBP19.5■□□□□ 0.71
CHRNB4-204ENST00000559849 FMN2Q9NZ56 1722 aa19.49■□□□□ 0.71
CHRNB4-204ENST00000559849 ADGRB2O60241 1585 aa19.48■□□□□ 0.71
CHRNB4-204ENST00000559849 WASLO00401 505 aaPredicted RBP19.47■□□□□ 0.71
CHRNB4-204ENST00000559849 CENPJQ9HC77 1338 aaPredicted RBP19.46■□□□□ 0.71
CHRNB4-204ENST00000559849 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
CHRNB4-204ENST00000559849 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
CHRNB4-204ENST00000559849 NHSL1Q5SYE7 1610 aa19.46■□□□□ 0.71
CHRNB4-204ENST00000559849 DDX17Q92841 729 aaKnown RBP19.46■□□□□ 0.71
CHRNB4-204ENST00000559849 CARD11Q9BXL7 1154 aa19.45■□□□□ 0.7
CHRNB4-204ENST00000559849 LRRC59Q96AG4 307 aaKnown RBP19.45■□□□□ 0.7
CHRNB4-204ENST00000559849 EIF3AQ14152 1382 aaKnown RBP19.45■□□□□ 0.7
CHRNB4-204ENST00000559849 JCADQ9P266 1359 aa19.45■□□□□ 0.7
CHRNB4-204ENST00000559849 RGPD8O14715 1765 aaPredicted RBP19.44■□□□□ 0.7
CHRNB4-204ENST00000559849 FOXO3O43524 673 aa19.44■□□□□ 0.7
CHRNB4-204ENST00000559849 NPHP3Q7Z494 1330 aa19.44■□□□□ 0.7
CHRNB4-204ENST00000559849 ANKARQ7Z5J8 1434 aa19.43■□□□□ 0.7
CHRNB4-204ENST00000559849 RALGAPBQ86X10 1494 aa19.43■□□□□ 0.7
CHRNB4-204ENST00000559849 SOS2Q07890 1332 aaPredicted RBP19.42■□□□□ 0.7
CHRNB4-204ENST00000559849 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
CHRNB4-204ENST00000559849 CDK19Q9BWU1 502 aa19.41■□□□□ 0.7
CHRNB4-204ENST00000559849 TULP4Q9NRJ4 1543 aa19.39■□□□□ 0.7
CHRNB4-204ENST00000559849 KIF1AQ12756 1690 aa19.39■□□□□ 0.69
CHRNB4-204ENST00000559849 USP32Q8NFA0 1604 aa19.39■□□□□ 0.69
CHRNB4-204ENST00000559849 PRR36Q9H6K5 1346 aa19.38■□□□□ 0.69
CHRNB4-204ENST00000559849 NUDT16Q96DE0 195 aaKnown RBP19.38■□□□□ 0.69
CHRNB4-204ENST00000559849 QRICH2Q9H0J4 1663 aa19.38■□□□□ 0.69
CHRNB4-204ENST00000559849 SPATA31A6Q5VVP1 1343 aa19.37■□□□□ 0.69
CHRNB4-204ENST00000559849 PMFBP1Q8TBY8 1022 aa19.37■□□□□ 0.69
CHRNB4-204ENST00000559849 DISP3Q9P2K9 1392 aa19.37■□□□□ 0.69
CHRNB4-204ENST00000559849 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
CHRNB4-204ENST00000559849 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
CHRNB4-204ENST00000559849 SRPK2P78362 688 aaKnown RBP19.36■□□□□ 0.69
CHRNB4-204ENST00000559849 XPCQ01831 940 aaPredicted RBP19.36■□□□□ 0.69
CHRNB4-204ENST00000559849 PSME1Q06323 249 aa19.35■□□□□ 0.69
CHRNB4-204ENST00000559849 KRT28Q7Z3Y7 464 aa19.35■□□□□ 0.69
CHRNB4-204ENST00000559849 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
CHRNB4-204ENST00000559849 PXDNQ92626 1479 aa19.34■□□□□ 0.69
CHRNB4-204ENST00000559849 EVC2Q86UK5 1308 aa19.34■□□□□ 0.69
CHRNB4-204ENST00000559849 ATP7BP35670 1465 aa19.33■□□□□ 0.69
CHRNB4-204ENST00000559849 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
CHRNB4-204ENST00000559849 PNPLA6Q8IY17 1366 aa19.32■□□□□ 0.68
CHRNB4-204ENST00000559849 ITSN1Q15811 1721 aa19.32■□□□□ 0.68
CHRNB4-204ENST00000559849 NGDNQ8NEJ9 315 aaKnown RBP19.32■□□□□ 0.68
CHRNB4-204ENST00000559849 SBNO2Q9Y2G9 1366 aa19.32■□□□□ 0.68
CHRNB4-204ENST00000559849 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
CHRNB4-204ENST00000559849 SPATA31A3Q5VYP0 1347 aa19.29■□□□□ 0.68
CHRNB4-204ENST00000559849 PLEKHG3A1L390 1219 aa19.29■□□□□ 0.68
CHRNB4-204ENST00000559849 NUTM2BA6NNL0 878 aaPredicted RBP19.29■□□□□ 0.68
CHRNB4-204ENST00000559849 NUTM2EB1AL46 878 aaPredicted RBP19.29■□□□□ 0.68
CHRNB4-204ENST00000559849 NUTM2AQ8IVF1 878 aaPredicted RBP19.29■□□□□ 0.68
CHRNB4-204ENST00000559849 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
CHRNB4-204ENST00000559849 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
CHRNB4-204ENST00000559849 SBNO1A3KN83 1393 aa19.27■□□□□ 0.68
CHRNB4-204ENST00000559849 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
CHRNB4-204ENST00000559849 TOPAZ1Q8N9V7 1692 aa19.26■□□□□ 0.67
CHRNB4-204ENST00000559849 ACEP12821 1306 aa19.26■□□□□ 0.67
CHRNB4-204ENST00000559849 LRP6O75581 1613 aa19.26■□□□□ 0.67
CHRNB4-204ENST00000559849 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
CHRNB4-204ENST00000559849 POLR3AO14802 1390 aaPredicted RBP19.25■□□□□ 0.67
CHRNB4-204ENST00000559849 USP47Q96K76 1375 aa19.25■□□□□ 0.67
CHRNB4-204ENST00000559849 CABP1Q9NZU7 370 aa19.24■□□□□ 0.67
CHRNB4-204ENST00000559849 TNS3Q68CZ2 1445 aa19.24■□□□□ 0.67
CHRNB4-204ENST00000559849 LMOD2Q6P5Q4 547 aa19.24■□□□□ 0.67
CHRNB4-204ENST00000559849 TESK2Q96S53 571 aa19.24■□□□□ 0.67
CHRNB4-204ENST00000559849 COL22A1Q8NFW1 1626 aaPredicted RBP19.24■□□□□ 0.67
CHRNB4-204ENST00000559849 ARHGEF10O15013 1369 aa19.22■□□□□ 0.67
CHRNB4-204ENST00000559849 PAK3O75914 559 aaPredicted RBP19.22■□□□□ 0.67
CHRNB4-204ENST00000559849 ATAD2Q6PL18 1390 aa19.22■□□□□ 0.67
CHRNB4-204ENST00000559849 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
CHRNB4-204ENST00000559849 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
CHRNB4-204ENST00000559849 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
CHRNB4-204ENST00000559849 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
CHRNB4-204ENST00000559849 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
CHRNB4-204ENST00000559849 TMF1P82094 1093 aa19.17■□□□□ 0.66
CHRNB4-204ENST00000559849 C8orf37Q96NL8 207 aa19.17■□□□□ 0.66
CHRNB4-204ENST00000559849 ALS2Q96Q42 1657 aa19.17■□□□□ 0.66
CHRNB4-204ENST00000559849 BRD4O60885 1362 aaPredicted RBP19.17■□□□□ 0.66
CHRNB4-204ENST00000559849 HAP1P54257 671 aaPredicted RBP19.16■□□□□ 0.66
CHRNB4-204ENST00000559849 CABLES1Q8TDN4 633 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms