RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 SOS2Q07890 1332 aaPredicted RBP28.12■■■□□ 2.09
CDC42BPB-206ENST00000559790 RAB3GAP2Q9H2M9 1393 aa28.11■■■□□ 2.09
CDC42BPB-206ENST00000559790 RGL3Q3MIN7 710 aa28.1■■■□□ 2.09
CDC42BPB-206ENST00000559790 ABCC11Q96J66 1382 aa28.09■■■□□ 2.09
CDC42BPB-206ENST00000559790 CDK12Q9NYV4 1490 aaPredicted RBP28.08■■■□□ 2.09
CDC42BPB-206ENST00000559790 NUTM2BA6NNL0 878 aaPredicted RBP28.08■■■□□ 2.09
CDC42BPB-206ENST00000559790 NUTM2EB1AL46 878 aaPredicted RBP28.08■■■□□ 2.09
CDC42BPB-206ENST00000559790 MEX3CQ5U5Q3 659 aaKnown RBP28.08■■■□□ 2.09
CDC42BPB-206ENST00000559790 NUTM2AQ8IVF1 878 aaPredicted RBP28.08■■■□□ 2.09
CDC42BPB-206ENST00000559790 LRRC59Q96AG4 307 aaKnown RBP28.08■■■□□ 2.09
CDC42BPB-206ENST00000559790 YTHDC2Q9H6S0 1430 aaKnown RBP28.08■■■□□ 2.09
CDC42BPB-206ENST00000559790 KIF1AQ12756 1690 aa28.07■■■□□ 2.08
CDC42BPB-206ENST00000559790 AFF2P51816 1311 aa28.06■■■□□ 2.08
CDC42BPB-206ENST00000559790 ZNF772Q68DY9 489 aaPredicted RBP28.05■■■□□ 2.08
CDC42BPB-206ENST00000559790 USP32Q8NFA0 1604 aa28.04■■■□□ 2.08
CDC42BPB-206ENST00000559790 ADGRB1O14514 1584 aa28.04■■■□□ 2.08
CDC42BPB-206ENST00000559790 TMEM132EQ6IEE7 984 aa28.03■■■□□ 2.08
CDC42BPB-206ENST00000559790 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
CDC42BPB-206ENST00000559790 ABCA3Q99758 1704 aa28.02■■■□□ 2.08
CDC42BPB-206ENST00000559790 RGS12O14924 1447 aa28.01■■■□□ 2.07
CDC42BPB-206ENST00000559790 ADGRB2O60241 1585 aa28■■■□□ 2.07
CDC42BPB-206ENST00000559790 STK26Q9P289 416 aa27.99■■■□□ 2.07
CDC42BPB-206ENST00000559790 DLC1Q96QB1 1528 aa27.98■■■□□ 2.07
CDC42BPB-206ENST00000559790 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.97■■■□□ 2.07
CDC42BPB-206ENST00000559790 C14orf93Q9H972 538 aaKnown RBP27.96■■■□□ 2.07
CDC42BPB-206ENST00000559790 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
CDC42BPB-206ENST00000559790 ACIN1Q9UKV3 1341 aaKnown RBP27.92■■■□□ 2.06
CDC42BPB-206ENST00000559790 ARHGEF28Q8N1W1 1705 aaKnown RBP27.92■■■□□ 2.06
CDC42BPB-206ENST00000559790 CFAP70Q5T0N1 1121 aa27.92■■■□□ 2.06
CDC42BPB-206ENST00000559790 NPHP3Q7Z494 1330 aa27.92■■■□□ 2.06
CDC42BPB-206ENST00000559790 RXRBP28702 533 aa27.91■■■□□ 2.06
CDC42BPB-206ENST00000559790 TRPM3Q9HCF6 1732 aaPredicted RBP27.91■■■□□ 2.06
CDC42BPB-206ENST00000559790 ESCO1Q5FWF5 840 aa27.9■■■□□ 2.06
CDC42BPB-206ENST00000559790 ADAMTS2O95450 1211 aa27.89■■■□□ 2.06
CDC42BPB-206ENST00000559790 UPF1Q92900 1129 aaKnown RBP eCLIP27.89■■■□□ 2.06
CDC42BPB-206ENST00000559790 NUTM2FA1L443 756 aa27.88■■■□□ 2.05
CDC42BPB-206ENST00000559790 ATRNO75882 1429 aa27.88■■■□□ 2.05
CDC42BPB-206ENST00000559790 XPCQ01831 940 aaPredicted RBP27.88■■■□□ 2.05
CDC42BPB-206ENST00000559790 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
CDC42BPB-206ENST00000559790 FOXO3O43524 673 aa27.87■■■□□ 2.05
CDC42BPB-206ENST00000559790 PLCH1Q4KWH8 1693 aa27.86■■■□□ 2.05
CDC42BPB-206ENST00000559790 CRYBG1Q9Y4K1 1723 aa27.86■■■□□ 2.05
CDC42BPB-206ENST00000559790 BCL9LQ86UU0 1499 aa27.85■■■□□ 2.05
CDC42BPB-206ENST00000559790 EP400Q96L91 3159 aa27.84■■■□□ 2.05
CDC42BPB-206ENST00000559790 ALS2Q96Q42 1657 aa27.84■■■□□ 2.05
CDC42BPB-206ENST00000559790 FNBP4Q8N3X1 1017 aaPredicted RBP27.83■■■□□ 2.05
CDC42BPB-206ENST00000559790 QTRT2Q9H974 415 aaKnown RBP27.83■■■□□ 2.05
CDC42BPB-206ENST00000559790 DHX57Q6P158 1386 aaKnown RBP27.83■■■□□ 2.05
CDC42BPB-206ENST00000559790 GLI3P10071 1580 aa27.82■■■□□ 2.04
CDC42BPB-206ENST00000559790 RBM6P78332 1123 aaKnown RBP27.81■■■□□ 2.04
CDC42BPB-206ENST00000559790 NGLY1Q96IV0 654 aa27.8■■■□□ 2.04
CDC42BPB-206ENST00000559790 BRWD3Q6RI45 1802 aa27.8■■■□□ 2.04
CDC42BPB-206ENST00000559790 NWD2Q9ULI1 1742 aa27.79■■■□□ 2.04
CDC42BPB-206ENST00000559790 SPATA31A3Q5VYP0 1347 aa27.79■■■□□ 2.04
CDC42BPB-206ENST00000559790 KIAA1210Q9ULL0 1709 aa27.78■■■□□ 2.04
CDC42BPB-206ENST00000559790 SLIT2O94813 1529 aa27.78■■■□□ 2.04
CDC42BPB-206ENST00000559790 TNS3Q68CZ2 1445 aa27.78■■■□□ 2.04
CDC42BPB-206ENST00000559790 ANKARQ7Z5J8 1434 aa27.78■■■□□ 2.04
CDC42BPB-206ENST00000559790 PRAM1Q96QH2 718 aa27.78■■■□□ 2.04
CDC42BPB-206ENST00000559790 NRAPQ86VF7 1730 aa27.76■■■□□ 2.03
CDC42BPB-206ENST00000559790 TULP4Q9NRJ4 1543 aa27.76■■■□□ 2.03
CDC42BPB-206ENST00000559790 ITSN1Q15811 1721 aa27.75■■■□□ 2.03
CDC42BPB-206ENST00000559790 TOPAZ1Q8N9V7 1692 aa27.75■■■□□ 2.03
CDC42BPB-206ENST00000559790 USP21Q9UK80 565 aa27.75■■■□□ 2.03
CDC42BPB-206ENST00000559790 HRCP23327 699 aa27.74■■■□□ 2.03
CDC42BPB-206ENST00000559790 SAFB2Q14151 953 aaKnown RBP eCLIP27.73■■■□□ 2.03
CDC42BPB-206ENST00000559790 PRR36Q9H6K5 1346 aa27.71■■■□□ 2.03
CDC42BPB-206ENST00000559790 TRPC5Q9UL62 973 aaPredicted RBP27.7■■■□□ 2.02
CDC42BPB-206ENST00000559790 PHF8Q9UPP1 1060 aa27.7■■■□□ 2.02
CDC42BPB-206ENST00000559790 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
CDC42BPB-206ENST00000559790 SBNO1A3KN83 1393 aa27.69■■■□□ 2.02
CDC42BPB-206ENST00000559790 ATP7BP35670 1465 aa27.68■■■□□ 2.02
CDC42BPB-206ENST00000559790 DCAF11Q8TEB1 546 aa27.67■■■□□ 2.02
CDC42BPB-206ENST00000559790 RALGAPBQ86X10 1494 aa27.66■■■□□ 2.02
CDC42BPB-206ENST00000559790 TRAK1Q9UPV9 953 aa27.66■■■□□ 2.02
CDC42BPB-206ENST00000559790 KDM2AQ9Y2K7 1162 aa27.64■■■□□ 2.02
CDC42BPB-206ENST00000559790 PHRF1Q9P1Y6 1649 aaKnown RBP27.63■■■□□ 2.01
CDC42BPB-206ENST00000559790 HIRIP3Q9BW71 556 aaPredicted RBP27.63■■■□□ 2.01
CDC42BPB-206ENST00000559790 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
CDC42BPB-206ENST00000559790 POGKQ9P215 609 aa27.61■■■□□ 2.01
CDC42BPB-206ENST00000559790 ATAD2Q6PL18 1390 aa27.6■■■□□ 2.01
CDC42BPB-206ENST00000559790 CABLES1Q8TDN4 633 aa27.6■■■□□ 2.01
CDC42BPB-206ENST00000559790 COL14A1Q05707 1796 aaKnown RBP27.6■■■□□ 2.01
CDC42BPB-206ENST00000559790 PMFBP1Q8TBY8 1022 aa27.59■■■□□ 2.01
CDC42BPB-206ENST00000559790 ARHGEF10O15013 1369 aa27.59■■■□□ 2.01
CDC42BPB-206ENST00000559790 GJD4Q96KN9 370 aaPredicted RBP27.57■■■□□ 2
CDC42BPB-206ENST00000559790 STAC3Q96MF2 364 aa27.57■■■□□ 2
CDC42BPB-206ENST00000559790 UNC5CLQ8IV45 518 aa27.56■■■□□ 2
CDC42BPB-206ENST00000559790 QRICH2Q9H0J4 1663 aa27.56■■■□□ 2
CDC42BPB-206ENST00000559790 WASLO00401 505 aaPredicted RBP27.55■■■□□ 2
CDC42BPB-206ENST00000559790 EIF3AQ14152 1382 aaKnown RBP27.55■■■□□ 2
CDC42BPB-206ENST00000559790 PSME1Q06323 249 aa27.53■■■□□ 2
CDC42BPB-206ENST00000559790 TRPM1Q7Z4N2 1603 aa27.52■■■□□ 2
CDC42BPB-206ENST00000559790 THSD7AQ9UPZ6 1657 aa27.49■■□□□ 1.99
CDC42BPB-206ENST00000559790 NRKQ7Z2Y5 1582 aa27.48■■□□□ 1.99
CDC42BPB-206ENST00000559790 PLEKHG5O94827 1062 aa27.46■■□□□ 1.99
CDC42BPB-206ENST00000559790 VPS72Q15906 364 aa27.46■■□□□ 1.99
CDC42BPB-206ENST00000559790 FAM83GA6ND36 823 aa27.45■■□□□ 1.98
CDC42BPB-206ENST00000559790 GPRASP1Q5JY77 1395 aa27.45■■□□□ 1.98
CDC42BPB-206ENST00000559790 NBPF1Q3BBV0 1214 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms