RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 NPHP3Q7Z494 1330 aa12.34□□□□□ -0.43
CDK12-205ENST00000559663 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.43
CDK12-205ENST00000559663 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
CDK12-205ENST00000559663 RRBP1Q9P2E9 1410 aaKnown RBP12.33□□□□□ -0.44
CDK12-205ENST00000559663 CDC42BPGQ6DT37 1551 aa12.32□□□□□ -0.44
CDK12-205ENST00000559663 BCL9LQ86UU0 1499 aa12.32□□□□□ -0.44
CDK12-205ENST00000559663 PXDNQ92626 1479 aa12.32□□□□□ -0.44
CDK12-205ENST00000559663 FOXD1Q16676 465 aa12.31□□□□□ -0.44
CDK12-205ENST00000559663 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
CDK12-205ENST00000559663 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
CDK12-205ENST00000559663 KIF1BO60333 1816 aa12.3□□□□□ -0.44
CDK12-205ENST00000559663 TECPR2O15040 1411 aa12.29□□□□□ -0.44
CDK12-205ENST00000559663 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
CDK12-205ENST00000559663 LRPPRCP42704 1394 aaKnown RBP12.29□□□□□ -0.44
CDK12-205ENST00000559663 FOXO3O43524 673 aa12.28□□□□□ -0.44
CDK12-205ENST00000559663 XPCQ01831 940 aaPredicted RBP12.28□□□□□ -0.44
CDK12-205ENST00000559663 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
CDK12-205ENST00000559663 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
CDK12-205ENST00000559663 ADGRF5Q8IZF2 1346 aa12.27□□□□□ -0.45
CDK12-205ENST00000559663 SLIT2O94813 1529 aa12.26□□□□□ -0.45
CDK12-205ENST00000559663 WAPLQ7Z5K2 1190 aa12.25□□□□□ -0.45
CDK12-205ENST00000559663 UNC5CLQ8IV45 518 aa12.25□□□□□ -0.45
CDK12-205ENST00000559663 ABCC11Q96J66 1382 aa12.25□□□□□ -0.45
CDK12-205ENST00000559663 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
CDK12-205ENST00000559663 PPLO60437 1756 aa12.25□□□□□ -0.45
CDK12-205ENST00000559663 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
CDK12-205ENST00000559663 CCDC144AA2RUR9 1427 aa12.24□□□□□ -0.45
CDK12-205ENST00000559663 BLMP54132 1417 aaPredicted RBP12.24□□□□□ -0.45
CDK12-205ENST00000559663 SPATA31A3Q5VYP0 1347 aa12.24□□□□□ -0.45
CDK12-205ENST00000559663 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
CDK12-205ENST00000559663 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
CDK12-205ENST00000559663 STK26Q9P289 416 aa12.24□□□□□ -0.45
CDK12-205ENST00000559663 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
CDK12-205ENST00000559663 GLI3P10071 1580 aa12.22□□□□□ -0.45
CDK12-205ENST00000559663 PIK3C2GO75747 1445 aa12.22□□□□□ -0.45
CDK12-205ENST00000559663 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.21□□□□□ -0.45
CDK12-205ENST00000559663 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
CDK12-205ENST00000559663 TMEM132EQ6IEE7 984 aa12.21□□□□□ -0.45
CDK12-205ENST00000559663 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
CDK12-205ENST00000559663 KRT28Q7Z3Y7 464 aa12.2□□□□□ -0.46
CDK12-205ENST00000559663 SIRT1Q96EB6 747 aa12.2□□□□□ -0.46
CDK12-205ENST00000559663 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
CDK12-205ENST00000559663 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
CDK12-205ENST00000559663 VPS72Q15906 364 aa12.19□□□□□ -0.46
CDK12-205ENST00000559663 KNDC1Q76NI1 1749 aa12.19□□□□□ -0.46
CDK12-205ENST00000559663 MARF1Q9Y4F3 1742 aaKnown RBP12.19□□□□□ -0.46
CDK12-205ENST00000559663 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
CDK12-205ENST00000559663 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
CDK12-205ENST00000559663 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
CDK12-205ENST00000559663 PHF8Q9UPP1 1060 aa12.18□□□□□ -0.46
CDK12-205ENST00000559663 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
CDK12-205ENST00000559663 FMN2Q9NZ56 1722 aa12.17□□□□□ -0.46
CDK12-205ENST00000559663 ONECUT3O60422 494 aaPredicted RBP12.17□□□□□ -0.46
CDK12-205ENST00000559663 PSME1Q06323 249 aa12.17□□□□□ -0.46
CDK12-205ENST00000559663 NRXN1Q9ULB1 1477 aa12.16□□□□□ -0.46
CDK12-205ENST00000559663 HAP1P54257 671 aaPredicted RBP12.16□□□□□ -0.46
CDK12-205ENST00000559663 SF3B2Q13435 895 aaKnown RBP12.16□□□□□ -0.46
CDK12-205ENST00000559663 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
CDK12-205ENST00000559663 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
CDK12-205ENST00000559663 C14orf93Q9H972 538 aaKnown RBP12.16□□□□□ -0.46
CDK12-205ENST00000559663 ARHGEF10O15013 1369 aa12.16□□□□□ -0.46
CDK12-205ENST00000559663 IFT172Q9UG01 1749 aa12.15□□□□□ -0.46
CDK12-205ENST00000559663 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.46
CDK12-205ENST00000559663 PRAM1Q96QH2 718 aa12.13□□□□□ -0.47
CDK12-205ENST00000559663 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
CDK12-205ENST00000559663 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
CDK12-205ENST00000559663 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
CDK12-205ENST00000559663 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
CDK12-205ENST00000559663 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
CDK12-205ENST00000559663 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
CDK12-205ENST00000559663 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
CDK12-205ENST00000559663 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDK12-205ENST00000559663 NWD2Q9ULI1 1742 aa12.11□□□□□ -0.47
CDK12-205ENST00000559663 LRP5O75197 1615 aa12.11□□□□□ -0.47
CDK12-205ENST00000559663 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
CDK12-205ENST00000559663 BAG6P46379 1132 aa12.1□□□□□ -0.47
CDK12-205ENST00000559663 DLC1Q96QB1 1528 aa12.1□□□□□ -0.47
CDK12-205ENST00000559663 A0A0G2JS52 829 aa12.09□□□□□ -0.47
CDK12-205ENST00000559663 MYT1Q01538 1121 aa12.09□□□□□ -0.47
CDK12-205ENST00000559663 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
CDK12-205ENST00000559663 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
CDK12-205ENST00000559663 BTG4Q9NY30 223 aa12.09□□□□□ -0.47
CDK12-205ENST00000559663 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
CDK12-205ENST00000559663 ABCA3Q99758 1704 aa12.08□□□□□ -0.47
CDK12-205ENST00000559663 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
CDK12-205ENST00000559663 HRCP23327 699 aa12.08□□□□□ -0.48
CDK12-205ENST00000559663 POGKQ9P215 609 aa12.08□□□□□ -0.48
CDK12-205ENST00000559663 ADGRB2O60241 1585 aa12.08□□□□□ -0.48
CDK12-205ENST00000559663 ACIN1Q9UKV3 1341 aaKnown RBP12.07□□□□□ -0.48
CDK12-205ENST00000559663 EIF3AQ14152 1382 aaKnown RBP12.06□□□□□ -0.48
CDK12-205ENST00000559663 GPRASP1Q5JY77 1395 aa12.06□□□□□ -0.48
CDK12-205ENST00000559663 ADGRB1O14514 1584 aa12.06□□□□□ -0.48
CDK12-205ENST00000559663 SPATA31A5Q5VU36 1347 aa12.06□□□□□ -0.48
CDK12-205ENST00000559663 SPATA31A7Q8IWB4 1347 aa12.06□□□□□ -0.48
CDK12-205ENST00000559663 PRR36Q9H6K5 1346 aa12.06□□□□□ -0.48
CDK12-205ENST00000559663 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
CDK12-205ENST00000559663 DISP2A7MBM2 1401 aa12.05□□□□□ -0.48
CDK12-205ENST00000559663 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
CDK12-205ENST00000559663 HIRIP3Q9BW71 556 aaPredicted RBP12.05□□□□□ -0.48
CDK12-205ENST00000559663 TRPM3Q9HCF6 1732 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms