RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 POTEAQ6S8J7 498 aa36.94■■■■□ 3.5
CRNDE-206ENST00000559432 ORAI2Q96SN7 254 aa36.94■■■■□ 3.5
CRNDE-206ENST00000559432 CDC42BPGQ6DT37 1551 aa36.94■■■■□ 3.5
CRNDE-206ENST00000559432 KNDC1Q76NI1 1749 aa36.93■■■■□ 3.5
CRNDE-206ENST00000559432 LAMC1P11047 1609 aa36.92■■■■□ 3.5
CRNDE-206ENST00000559432 CFAP70Q5T0N1 1121 aa36.92■■■■□ 3.5
CRNDE-206ENST00000559432 NUTM2BA6NNL0 878 aaPredicted RBP36.91■■■■□ 3.5
CRNDE-206ENST00000559432 NUTM2EB1AL46 878 aaPredicted RBP36.91■■■■□ 3.5
CRNDE-206ENST00000559432 NUTM2AQ8IVF1 878 aaPredicted RBP36.91■■■■□ 3.5
CRNDE-206ENST00000559432 DHX57Q6P158 1386 aaKnown RBP36.91■■■■□ 3.5
CRNDE-206ENST00000559432 PLEKHH1Q9ULM0 1364 aa36.88■■■■□ 3.49
CRNDE-206ENST00000559432 SIRT1Q96EB6 747 aa36.86■■■■□ 3.49
CRNDE-206ENST00000559432 ESCO1Q5FWF5 840 aa36.85■■■■□ 3.49
CRNDE-206ENST00000559432 DCAF11Q8TEB1 546 aa36.84■■■■□ 3.49
CRNDE-206ENST00000559432 PNPLA6Q8IY17 1366 aa36.83■■■■□ 3.49
CRNDE-206ENST00000559432 KDM2AQ9Y2K7 1162 aa36.83■■■■□ 3.49
CRNDE-206ENST00000559432 ZNF772Q68DY9 489 aaPredicted RBP36.82■■■■□ 3.48
CRNDE-206ENST00000559432 SOS2Q07890 1332 aaPredicted RBP36.82■■■■□ 3.48
CRNDE-206ENST00000559432 NUTM2FA1L443 756 aa36.8■■■■□ 3.48
CRNDE-206ENST00000559432 STAC3Q96MF2 364 aa36.8■■■■□ 3.48
CRNDE-206ENST00000559432 NPHP3Q7Z494 1330 aa36.78■■■■□ 3.48
CRNDE-206ENST00000559432 PRAM1Q96QH2 718 aa36.74■■■■□ 3.47
CRNDE-206ENST00000559432 POGKQ9P215 609 aa36.73■■■■□ 3.47
CRNDE-206ENST00000559432 FMN2Q9NZ56 1722 aa36.71■■■■□ 3.47
CRNDE-206ENST00000559432 DLC1Q96QB1 1528 aa36.71■■■■□ 3.47
CRNDE-206ENST00000559432 FOXO3O43524 673 aa36.71■■■■□ 3.47
CRNDE-206ENST00000559432 SAFB2Q14151 953 aaKnown RBP eCLIP36.71■■■■□ 3.47
CRNDE-206ENST00000559432 ADGRB1O14514 1584 aa36.7■■■■□ 3.46
CRNDE-206ENST00000559432 AFF2P51816 1311 aa36.68■■■■□ 3.46
CRNDE-206ENST00000559432 C8orf37Q96NL8 207 aa36.68■■■■□ 3.46
CRNDE-206ENST00000559432 TRAK1Q9UPV9 953 aa36.67■■■■□ 3.46
CRNDE-206ENST00000559432 PXDNQ92626 1479 aa36.65■■■■□ 3.46
CRNDE-206ENST00000559432 XPCQ01831 940 aaPredicted RBP36.65■■■■□ 3.46
CRNDE-206ENST00000559432 ADAMTS2O95450 1211 aa36.64■■■■□ 3.46
CRNDE-206ENST00000559432 KIF1AQ12756 1690 aa36.62■■■■□ 3.45
CRNDE-206ENST00000559432 RXRBP28702 533 aa36.6■■■■□ 3.45
CRNDE-206ENST00000559432 NGLY1Q96IV0 654 aa36.59■■■■□ 3.45
CRNDE-206ENST00000559432 COL22A1Q8NFW1 1626 aaPredicted RBP36.59■■■■□ 3.45
CRNDE-206ENST00000559432 PHF8Q9UPP1 1060 aa36.57■■■■□ 3.44
CRNDE-206ENST00000559432 ADGRB2O60241 1585 aa36.54■■■■□ 3.44
CRNDE-206ENST00000559432 KRT28Q7Z3Y7 464 aa36.54■■■■□ 3.44
CRNDE-206ENST00000559432 HIRIP3Q9BW71 556 aaPredicted RBP36.53■■■■□ 3.44
CRNDE-206ENST00000559432 MINK1Q8N4C8 1332 aaPredicted RBP36.53■■■■□ 3.44
CRNDE-206ENST00000559432 ANKARQ7Z5J8 1434 aa36.51■■■■□ 3.44
CRNDE-206ENST00000559432 PSME1Q06323 249 aa36.5■■■■□ 3.43
CRNDE-206ENST00000559432 QTRT2Q9H974 415 aaKnown RBP36.5■■■■□ 3.43
CRNDE-206ENST00000559432 EIF3AQ14152 1382 aaKnown RBP36.5■■■■□ 3.43
CRNDE-206ENST00000559432 RGPD8O14715 1765 aaPredicted RBP36.49■■■■□ 3.43
CRNDE-206ENST00000559432 SPATA31A3Q5VYP0 1347 aa36.49■■■■□ 3.43
CRNDE-206ENST00000559432 CDK12Q9NYV4 1490 aaPredicted RBP36.45■■■■□ 3.43
CRNDE-206ENST00000559432 USP21Q9UK80 565 aa36.45■■■■□ 3.43
CRNDE-206ENST00000559432 RBM6P78332 1123 aaKnown RBP36.44■■■■□ 3.42
CRNDE-206ENST00000559432 PMFBP1Q8TBY8 1022 aa36.44■■■■□ 3.42
CRNDE-206ENST00000559432 WASLO00401 505 aaPredicted RBP36.43■■■■□ 3.42
CRNDE-206ENST00000559432 USP32Q8NFA0 1604 aa36.43■■■■□ 3.42
CRNDE-206ENST00000559432 FNBP4Q8N3X1 1017 aaPredicted RBP36.42■■■■□ 3.42
CRNDE-206ENST00000559432 ARHGEF28Q8N1W1 1705 aaKnown RBP36.42■■■■□ 3.42
CRNDE-206ENST00000559432 KIAA1210Q9ULL0 1709 aa36.41■■■■□ 3.42
CRNDE-206ENST00000559432 TNS3Q68CZ2 1445 aa36.41■■■■□ 3.42
CRNDE-206ENST00000559432 TULP4Q9NRJ4 1543 aa36.4■■■■□ 3.42
CRNDE-206ENST00000559432 TRPC5Q9UL62 973 aaPredicted RBP36.38■■■■□ 3.41
CRNDE-206ENST00000559432 SBNO1A3KN83 1393 aa36.38■■■■□ 3.41
CRNDE-206ENST00000559432 HAP1P54257 671 aaPredicted RBP36.37■■■■□ 3.41
CRNDE-206ENST00000559432 LMOD2Q6P5Q4 547 aa36.37■■■■□ 3.41
CRNDE-206ENST00000559432 PRR36Q9H6K5 1346 aa36.35■■■■□ 3.41
CRNDE-206ENST00000559432 ARHGEF10O15013 1369 aa36.34■■■■□ 3.41
CRNDE-206ENST00000559432 MARF1Q9Y4F3 1742 aaKnown RBP36.34■■■■□ 3.41
CRNDE-206ENST00000559432 GPRASP1Q5JY77 1395 aa36.33■■■■□ 3.41
CRNDE-206ENST00000559432 NBPF1Q3BBV0 1214 aa36.33■■■■□ 3.41
CRNDE-206ENST00000559432 L3MBTL2Q969R5 705 aa36.31■■■■□ 3.4
CRNDE-206ENST00000559432 SIN3AQ96ST3 1273 aa36.31■■■■□ 3.4
CRNDE-206ENST00000559432 RGS12O14924 1447 aa36.31■■■■□ 3.4
CRNDE-206ENST00000559432 PLEKHG5O94827 1062 aa36.29■■■■□ 3.4
CRNDE-206ENST00000559432 NEUROD1Q13562 356 aa36.29■■■■□ 3.4
CRNDE-206ENST00000559432 NGDNQ8NEJ9 315 aaKnown RBP36.29■■■■□ 3.4
CRNDE-206ENST00000559432 ATRNO75882 1429 aa36.28■■■■□ 3.4
CRNDE-206ENST00000559432 CABLES1Q8TDN4 633 aa36.27■■■■□ 3.4
CRNDE-206ENST00000559432 BCL9LQ86UU0 1499 aa36.26■■■■□ 3.4
CRNDE-206ENST00000559432 NUDT16Q96DE0 195 aaKnown RBP36.26■■■■□ 3.4
CRNDE-206ENST00000559432 CDK19Q9BWU1 502 aa36.26■■■■□ 3.4
CRNDE-206ENST00000559432 UPF1Q92900 1129 aaKnown RBP eCLIP36.25■■■■□ 3.39
CRNDE-206ENST00000559432 ATP7BP35670 1465 aa36.24■■■■□ 3.39
CRNDE-206ENST00000559432 ITSN1Q15811 1721 aa36.22■■■■□ 3.39
CRNDE-206ENST00000559432 UNC5CLQ8IV45 518 aa36.2■■■■□ 3.39
CRNDE-206ENST00000559432 TRPM3Q9HCF6 1732 aaPredicted RBP36.2■■■■□ 3.38
CRNDE-206ENST00000559432 SLIT2O94813 1529 aa36.19■■■■□ 3.38
CRNDE-206ENST00000559432 CENPJQ9HC77 1338 aaPredicted RBP36.19■■■■□ 3.38
CRNDE-206ENST00000559432 PAK3O75914 559 aaPredicted RBP36.18■■■■□ 3.38
CRNDE-206ENST00000559432 GJD4Q96KN9 370 aaPredicted RBP36.16■■■■□ 3.38
CRNDE-206ENST00000559432 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.16■■■■□ 3.38
CRNDE-206ENST00000559432 ABCA3Q99758 1704 aa36.15■■■■□ 3.38
CRNDE-206ENST00000559432 CCDC61Q9Y6R9 512 aa36.15■■■■□ 3.38
CRNDE-206ENST00000559432 ALS2Q96Q42 1657 aa36.13■■■■□ 3.37
CRNDE-206ENST00000559432 SRPK2P78362 688 aaKnown RBP36.12■■■■□ 3.37
CRNDE-206ENST00000559432 TRPM1Q7Z4N2 1603 aa36.1■■■■□ 3.37
CRNDE-206ENST00000559432 TRIM26Q12899 539 aaPredicted RBP36.1■■■■□ 3.37
CRNDE-206ENST00000559432 TOPAZ1Q8N9V7 1692 aa36.08■■■■□ 3.37
CRNDE-206ENST00000559432 ROCK2O75116 1388 aaKnown RBP36.08■■■■□ 3.37
CRNDE-206ENST00000559432 ATAD2Q6PL18 1390 aa36.08■■■■□ 3.37
CRNDE-206ENST00000559432 ACEP12821 1306 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms