RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 FAM135BQ49AJ0 1406 aa27.01■■□□□ 1.91
CASC4-209ENST00000559222 ATF3P18847 181 aa27.01■■□□□ 1.91
CASC4-209ENST00000559222 SLAIN2Q9P270 581 aa27.01■■□□□ 1.91
CASC4-209ENST00000559222 CADPS2Q86UW7 1296 aa27■■□□□ 1.91
CASC4-209ENST00000559222 TRAK1Q9UPV9 953 aa27■■□□□ 1.91
CASC4-209ENST00000559222 SAFB2Q14151 953 aaKnown RBP eCLIP26.98■■□□□ 1.91
CASC4-209ENST00000559222 NBPF8Q3BBV2 869 aa26.98■■□□□ 1.91
CASC4-209ENST00000559222 PRAM1Q96QH2 718 aa26.98■■□□□ 1.91
CASC4-209ENST00000559222 TONSLQ96HA7 1378 aa26.97■■□□□ 1.91
CASC4-209ENST00000559222 FMN2Q9NZ56 1722 aa26.97■■□□□ 1.91
CASC4-209ENST00000559222 PHLPP1O60346 1717 aa26.96■■□□□ 1.91
CASC4-209ENST00000559222 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
CASC4-209ENST00000559222 SIRT1Q96EB6 747 aa26.93■■□□□ 1.9
CASC4-209ENST00000559222 RGPD8O14715 1765 aaPredicted RBP26.92■■□□□ 1.9
CASC4-209ENST00000559222 ADGRB2O60241 1585 aa26.92■■□□□ 1.9
CASC4-209ENST00000559222 NHSL1Q5SYE7 1610 aa26.91■■□□□ 1.9
CASC4-209ENST00000559222 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
CASC4-209ENST00000559222 COL16A1Q07092 1604 aaPredicted RBP26.9■■□□□ 1.9
CASC4-209ENST00000559222 AHDC1Q5TGY3 1603 aaPredicted RBP26.9■■□□□ 1.9
CASC4-209ENST00000559222 USP32Q8NFA0 1604 aa26.88■■□□□ 1.89
CASC4-209ENST00000559222 NUTM2FA1L443 756 aa26.88■■□□□ 1.89
CASC4-209ENST00000559222 POGKQ9P215 609 aa26.88■■□□□ 1.89
CASC4-209ENST00000559222 HIRIP3Q9BW71 556 aaPredicted RBP26.86■■□□□ 1.89
CASC4-209ENST00000559222 MINK1Q8N4C8 1332 aaPredicted RBP26.86■■□□□ 1.89
CASC4-209ENST00000559222 QRICH2Q9H0J4 1663 aa26.85■■□□□ 1.89
CASC4-209ENST00000559222 CCER1Q8TC90 406 aaPredicted RBP26.85■■□□□ 1.89
CASC4-209ENST00000559222 DDX17Q92841 729 aaKnown RBP26.85■■□□□ 1.89
CASC4-209ENST00000559222 ORAI2Q96SN7 254 aa26.85■■□□□ 1.89
CASC4-209ENST00000559222 RALGAPBQ86X10 1494 aa26.85■■□□□ 1.89
CASC4-209ENST00000559222 ROCK2O75116 1388 aaKnown RBP26.84■■□□□ 1.89
CASC4-209ENST00000559222 CLSPNQ9HAW4 1339 aa26.83■■□□□ 1.89
CASC4-209ENST00000559222 GPRASP1Q5JY77 1395 aa26.8■■□□□ 1.88
CASC4-209ENST00000559222 MED1Q15648 1581 aaPredicted RBP26.75■■□□□ 1.87
CASC4-209ENST00000559222 TULP4Q9NRJ4 1543 aa26.75■■□□□ 1.87
CASC4-209ENST00000559222 PRR36Q9H6K5 1346 aa26.75■■□□□ 1.87
CASC4-209ENST00000559222 KIF1AQ12756 1690 aa26.75■■□□□ 1.87
CASC4-209ENST00000559222 ESCO1Q5FWF5 840 aa26.74■■□□□ 1.87
CASC4-209ENST00000559222 CENPJQ9HC77 1338 aaPredicted RBP26.73■■□□□ 1.87
CASC4-209ENST00000559222 SHPRHQ149N8 1683 aa26.73■■□□□ 1.87
CASC4-209ENST00000559222 TOPAZ1Q8N9V7 1692 aa26.71■■□□□ 1.87
CASC4-209ENST00000559222 ATP7BP35670 1465 aa26.71■■□□□ 1.87
CASC4-209ENST00000559222 WASLO00401 505 aaPredicted RBP26.71■■□□□ 1.87
CASC4-209ENST00000559222 ANKARQ7Z5J8 1434 aa26.71■■□□□ 1.87
CASC4-209ENST00000559222 PXDNQ92626 1479 aa26.7■■□□□ 1.87
CASC4-209ENST00000559222 CARD11Q9BXL7 1154 aa26.69■■□□□ 1.86
CASC4-209ENST00000559222 ITSN1Q15811 1721 aa26.68■■□□□ 1.86
CASC4-209ENST00000559222 XPCQ01831 940 aaPredicted RBP26.68■■□□□ 1.86
CASC4-209ENST00000559222 JCADQ9P266 1359 aa26.66■■□□□ 1.86
CASC4-209ENST00000559222 FOXO3O43524 673 aa26.65■■□□□ 1.86
CASC4-209ENST00000559222 CDK19Q9BWU1 502 aa26.65■■□□□ 1.86
CASC4-209ENST00000559222 SOS2Q07890 1332 aaPredicted RBP26.65■■□□□ 1.86
CASC4-209ENST00000559222 PMFBP1Q8TBY8 1022 aa26.63■■□□□ 1.85
CASC4-209ENST00000559222 PHF8Q9UPP1 1060 aa26.63■■□□□ 1.85
CASC4-209ENST00000559222 LRP6O75581 1613 aa26.63■■□□□ 1.85
CASC4-209ENST00000559222 EIF3AQ14152 1382 aaKnown RBP26.62■■□□□ 1.85
CASC4-209ENST00000559222 TIMELESSQ9UNS1 1208 aa26.62■■□□□ 1.85
CASC4-209ENST00000559222 NPHP3Q7Z494 1330 aa26.61■■□□□ 1.85
CASC4-209ENST00000559222 PNPLA6Q8IY17 1366 aa26.6■■□□□ 1.85
CASC4-209ENST00000559222 TRPM3Q9HCF6 1732 aaPredicted RBP26.6■■□□□ 1.85
CASC4-209ENST00000559222 NUDT16Q96DE0 195 aaKnown RBP26.6■■□□□ 1.85
CASC4-209ENST00000559222 CABP2Q9NPB3 220 aa26.58■■□□□ 1.85
CASC4-209ENST00000559222 COL22A1Q8NFW1 1626 aaPredicted RBP26.56■■□□□ 1.84
CASC4-209ENST00000559222 LRRC59Q96AG4 307 aaKnown RBP26.55■■□□□ 1.84
CASC4-209ENST00000559222 SRPK2P78362 688 aaKnown RBP26.54■■□□□ 1.84
CASC4-209ENST00000559222 KRT28Q7Z3Y7 464 aa26.53■■□□□ 1.84
CASC4-209ENST00000559222 USP47Q96K76 1375 aa26.53■■□□□ 1.84
CASC4-209ENST00000559222 SBNO2Q9Y2G9 1366 aa26.53■■□□□ 1.84
CASC4-209ENST00000559222 ALS2Q96Q42 1657 aa26.51■■□□□ 1.83
CASC4-209ENST00000559222 PPIP5K1Q6PFW1 1433 aa26.51■■□□□ 1.83
CASC4-209ENST00000559222 EVC2Q86UK5 1308 aa26.5■■□□□ 1.83
CASC4-209ENST00000559222 ST20-MTHFSA0A0A6YYL1 179 aa26.5■■□□□ 1.83
CASC4-209ENST00000559222 ABCA3Q99758 1704 aa26.5■■□□□ 1.83
CASC4-209ENST00000559222 TNS3Q68CZ2 1445 aa26.49■■□□□ 1.83
CASC4-209ENST00000559222 SPATA31A6Q5VVP1 1343 aa26.49■■□□□ 1.83
CASC4-209ENST00000559222 NUTM2BA6NNL0 878 aaPredicted RBP26.49■■□□□ 1.83
CASC4-209ENST00000559222 NUTM2EB1AL46 878 aaPredicted RBP26.49■■□□□ 1.83
CASC4-209ENST00000559222 NUTM2AQ8IVF1 878 aaPredicted RBP26.49■■□□□ 1.83
CASC4-209ENST00000559222 SPATA31A3Q5VYP0 1347 aa26.48■■□□□ 1.83
CASC4-209ENST00000559222 TESK2Q96S53 571 aa26.48■■□□□ 1.83
CASC4-209ENST00000559222 CCDC61Q9Y6R9 512 aa26.47■■□□□ 1.83
CASC4-209ENST00000559222 POLR3AO14802 1390 aaPredicted RBP26.46■■□□□ 1.83
CASC4-209ENST00000559222 PSME1Q06323 249 aa26.46■■□□□ 1.83
CASC4-209ENST00000559222 NGDNQ8NEJ9 315 aaKnown RBP26.46■■□□□ 1.83
CASC4-209ENST00000559222 ACEP12821 1306 aa26.45■■□□□ 1.83
CASC4-209ENST00000559222 AKAP12Q02952 1782 aa26.45■■□□□ 1.82
CASC4-209ENST00000559222 SBNO1A3KN83 1393 aa26.45■■□□□ 1.82
CASC4-209ENST00000559222 PLEKHG3A1L390 1219 aa26.44■■□□□ 1.82
CASC4-209ENST00000559222 CRYBG1Q9Y4K1 1723 aa26.44■■□□□ 1.82
CASC4-209ENST00000559222 MARF1Q9Y4F3 1742 aaKnown RBP26.43■■□□□ 1.82
CASC4-209ENST00000559222 RGS17Q9UGC6 210 aaPredicted RBP26.43■■□□□ 1.82
CASC4-209ENST00000559222 CABP1Q9NZU7 370 aa26.42■■□□□ 1.82
CASC4-209ENST00000559222 PLEKHG5O94827 1062 aa26.41■■□□□ 1.82
CASC4-209ENST00000559222 PHF23Q9BUL5 403 aaPredicted RBP26.39■■□□□ 1.82
CASC4-209ENST00000559222 NRKQ7Z2Y5 1582 aa26.38■■□□□ 1.81
CASC4-209ENST00000559222 LMOD2Q6P5Q4 547 aa26.38■■□□□ 1.81
CASC4-209ENST00000559222 MON2Q7Z3U7 1717 aa26.37■■□□□ 1.81
CASC4-209ENST00000559222 ATAD2Q6PL18 1390 aa26.37■■□□□ 1.81
CASC4-209ENST00000559222 ADAMTS2O95450 1211 aa26.37■■□□□ 1.81
CASC4-209ENST00000559222 MEX3CQ5U5Q3 659 aaKnown RBP26.37■■□□□ 1.81
CASC4-209ENST00000559222 CABLES1Q8TDN4 633 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms