RNA–Protein interactions for RNA: ENST00000559207.1

CPNE6-212, Transcript of copine 6, humanhuman

TSL 3

Gene CPNE6, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-212ENST00000559207 IFT172Q9UG01 1749 aa17.23■□□□□ 0.35
CPNE6-212ENST00000559207 LRPPRCP42704 1394 aaKnown RBP17.23■□□□□ 0.35
CPNE6-212ENST00000559207 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
CPNE6-212ENST00000559207 ESCO1Q5FWF5 840 aa17.22■□□□□ 0.35
CPNE6-212ENST00000559207 TECPR2O15040 1411 aa17.21■□□□□ 0.35
CPNE6-212ENST00000559207 PIK3C2GO75747 1445 aa17.21■□□□□ 0.35
CPNE6-212ENST00000559207 ABCC11Q96J66 1382 aa17.21■□□□□ 0.35
CPNE6-212ENST00000559207 ADAMTS2O95450 1211 aa17.21■□□□□ 0.35
CPNE6-212ENST00000559207 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
CPNE6-212ENST00000559207 PLEKHH1Q9ULM0 1364 aa17.2■□□□□ 0.34
CPNE6-212ENST00000559207 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
CPNE6-212ENST00000559207 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPNE6-212ENST00000559207 NGLY1Q96IV0 654 aa17.19■□□□□ 0.34
CPNE6-212ENST00000559207 QTRT2Q9H974 415 aaKnown RBP17.19■□□□□ 0.34
CPNE6-212ENST00000559207 FOXO3O43524 673 aa17.18■□□□□ 0.34
CPNE6-212ENST00000559207 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
CPNE6-212ENST00000559207 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
CPNE6-212ENST00000559207 RAB3GAP2Q9H2M9 1393 aa17.17■□□□□ 0.34
CPNE6-212ENST00000559207 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
CPNE6-212ENST00000559207 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
CPNE6-212ENST00000559207 RBM6P78332 1123 aaKnown RBP17.16■□□□□ 0.34
CPNE6-212ENST00000559207 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
CPNE6-212ENST00000559207 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
CPNE6-212ENST00000559207 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
CPNE6-212ENST00000559207 PXDNQ92626 1479 aa17.15■□□□□ 0.34
CPNE6-212ENST00000559207 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
CPNE6-212ENST00000559207 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
CPNE6-212ENST00000559207 USP21Q9UK80 565 aa17.13■□□□□ 0.33
CPNE6-212ENST00000559207 MYOM2P54296 1465 aa17.12■□□□□ 0.33
CPNE6-212ENST00000559207 COL22A1Q8NFW1 1626 aaPredicted RBP17.12■□□□□ 0.33
CPNE6-212ENST00000559207 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
CPNE6-212ENST00000559207 DHX57Q6P158 1386 aaKnown RBP17.12■□□□□ 0.33
CPNE6-212ENST00000559207 RGS12O14924 1447 aa17.12■□□□□ 0.33
CPNE6-212ENST00000559207 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
CPNE6-212ENST00000559207 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
CPNE6-212ENST00000559207 TRPC5Q9UL62 973 aaPredicted RBP17.09■□□□□ 0.33
CPNE6-212ENST00000559207 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
CPNE6-212ENST00000559207 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
CPNE6-212ENST00000559207 KRT28Q7Z3Y7 464 aa17.07■□□□□ 0.32
CPNE6-212ENST00000559207 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
CPNE6-212ENST00000559207 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
CPNE6-212ENST00000559207 ATRNO75882 1429 aa17.05■□□□□ 0.32
CPNE6-212ENST00000559207 POGKQ9P215 609 aa17.05■□□□□ 0.32
CPNE6-212ENST00000559207 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
CPNE6-212ENST00000559207 HRCP23327 699 aa17.04■□□□□ 0.32
CPNE6-212ENST00000559207 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
CPNE6-212ENST00000559207 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
CPNE6-212ENST00000559207 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
CPNE6-212ENST00000559207 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
CPNE6-212ENST00000559207 DLC1Q96QB1 1528 aa17.03■□□□□ 0.32
CPNE6-212ENST00000559207 TRAK1Q9UPV9 953 aa17.03■□□□□ 0.32
CPNE6-212ENST00000559207 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
CPNE6-212ENST00000559207 PSME1Q06323 249 aa17.01■□□□□ 0.31
CPNE6-212ENST00000559207 PMFBP1Q8TBY8 1022 aa17■□□□□ 0.31
CPNE6-212ENST00000559207 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
CPNE6-212ENST00000559207 GJD4Q96KN9 370 aaPredicted RBP17■□□□□ 0.31
CPNE6-212ENST00000559207 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
CPNE6-212ENST00000559207 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
CPNE6-212ENST00000559207 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
CPNE6-212ENST00000559207 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
CPNE6-212ENST00000559207 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
CPNE6-212ENST00000559207 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
CPNE6-212ENST00000559207 UNC5CLQ8IV45 518 aa16.98■□□□□ 0.31
CPNE6-212ENST00000559207 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
CPNE6-212ENST00000559207 ATAD2Q6PL18 1390 aa16.98■□□□□ 0.31
CPNE6-212ENST00000559207 SLIT2O94813 1529 aa16.97■□□□□ 0.31
CPNE6-212ENST00000559207 USP32Q8NFA0 1604 aa16.97■□□□□ 0.31
CPNE6-212ENST00000559207 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
CPNE6-212ENST00000559207 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-212ENST00000559207 ADGRB2O60241 1585 aa16.96■□□□□ 0.31
CPNE6-212ENST00000559207 PRR36Q9H6K5 1346 aa16.96■□□□□ 0.3
CPNE6-212ENST00000559207 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
CPNE6-212ENST00000559207 EP400Q96L91 3159 aa16.95■□□□□ 0.3
CPNE6-212ENST00000559207 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
CPNE6-212ENST00000559207 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
CPNE6-212ENST00000559207 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
CPNE6-212ENST00000559207 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
CPNE6-212ENST00000559207 GLI3P10071 1580 aa16.91■□□□□ 0.3
CPNE6-212ENST00000559207 FAM83GA6ND36 823 aa16.91■□□□□ 0.3
CPNE6-212ENST00000559207 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
CPNE6-212ENST00000559207 VPS72Q15906 364 aa16.9■□□□□ 0.3
CPNE6-212ENST00000559207 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.3
CPNE6-212ENST00000559207 TRPM3Q9HCF6 1732 aaPredicted RBP16.89■□□□□ 0.29
CPNE6-212ENST00000559207 ABCA3Q99758 1704 aa16.88■□□□□ 0.29
CPNE6-212ENST00000559207 CCDC125Q86Z20 511 aa16.88■□□□□ 0.29
CPNE6-212ENST00000559207 NGDNQ8NEJ9 315 aaKnown RBP16.88■□□□□ 0.29
CPNE6-212ENST00000559207 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
CPNE6-212ENST00000559207 CCDC9Q9Y3X0 531 aaKnown RBP16.87■□□□□ 0.29
CPNE6-212ENST00000559207 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
CPNE6-212ENST00000559207 PLCH1Q4KWH8 1693 aa16.86■□□□□ 0.29
CPNE6-212ENST00000559207 ONECUT3O60422 494 aaPredicted RBP16.86■□□□□ 0.29
CPNE6-212ENST00000559207 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
CPNE6-212ENST00000559207 NBPF1Q3BBV0 1214 aa16.86■□□□□ 0.29
CPNE6-212ENST00000559207 SEPT12Q8IYM1 358 aa16.86■□□□□ 0.29
CPNE6-212ENST00000559207 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
CPNE6-212ENST00000559207 ALS2Q96Q42 1657 aa16.85■□□□□ 0.29
CPNE6-212ENST00000559207 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
CPNE6-212ENST00000559207 SRCAPQ6ZRS2 3230 aa16.84■□□□□ 0.29
CPNE6-212ENST00000559207 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
CPNE6-212ENST00000559207 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms